Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05030

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,088,193	+		OKGIIK_05020	0.70	-0.6
1,088,193	+		OKGIIK_05020	0.70	+0.8
1,088,193	+		OKGIIK_05020	0.70	+1.0
1,088,194	-		OKGIIK_05020	0.70	+0.0
1,088,194	-		OKGIIK_05020	0.70	-0.5
1,088,356	-				+1.9
1,088,450	+				+0.4
1,088,450	+				+2.4
1,088,450	+				+1.6
1,088,450	+				-0.8
1,088,450	+				+0.7
1,088,450	+				+1.6
1,088,456	+				+1.0
1,088,456	+				-0.5
1,088,456	+				-1.5
1,088,456	+				-0.3
1,088,456	+				-2.2
1,088,456	+				+0.7
1,088,457	-				-0.5
1,088,493	+				-0.1
1,088,519	+		OKGIIK_05025	0.13	-1.8
1,088,520	-		OKGIIK_05025	0.14	+0.2
1,088,573	+		OKGIIK_05025	0.24	-0.5
1,088,573	+		OKGIIK_05025	0.24	+0.0
1,088,573	+		OKGIIK_05025	0.24	-0.9
1,088,573	+		OKGIIK_05025	0.24	+0.5
1,088,573	+		OKGIIK_05025	0.24	-0.5
1,088,573	+		OKGIIK_05025	0.24	-0.3
1,088,573	+		OKGIIK_05025	0.24	+0.6
1,088,574	-		OKGIIK_05025	0.24	+0.6
1,088,574	-		OKGIIK_05025	0.24	+0.0
1,088,574	-		OKGIIK_05025	0.24	+0.0
1,088,574	-		OKGIIK_05025	0.24	+1.6
1,088,574	-		OKGIIK_05025	0.24	-0.5
1,088,574	-		OKGIIK_05025	0.24	+0.5
1,088,574	-		OKGIIK_05025	0.24	+0.2
1,088,574	-		OKGIIK_05025	0.24	-0.8
1,088,574	-		OKGIIK_05025	0.24	+0.2
1,088,574	-		OKGIIK_05025	0.24	-1.7
1,088,574	-		OKGIIK_05025	0.24	+0.4
1,088,574	-		OKGIIK_05025	0.24	+0.9
1,088,574	-		OKGIIK_05025	0.24	+0.0
1,088,574	-		OKGIIK_05025	0.24	+0.3
1,088,574	-		OKGIIK_05025	0.24	+1.0
1,088,574	-		OKGIIK_05025	0.24	-0.5
1,088,574	-		OKGIIK_05025	0.24	-1.7
1,088,582	+		OKGIIK_05025	0.25	-0.5
1,088,582	+		OKGIIK_05025	0.25	-0.7
1,088,582	+		OKGIIK_05025	0.25	+0.0
1,088,582	+		OKGIIK_05025	0.25	+0.6
1,088,583	-		OKGIIK_05025	0.26	-1.1
1,088,714	+		OKGIIK_05025	0.51	+0.2
1,088,714	+		OKGIIK_05025	0.51	-0.1
1,088,714	+		OKGIIK_05025	0.51	-0.1
1,088,714	+		OKGIIK_05025	0.51	-1.4
1,088,714	+		OKGIIK_05025	0.51	+1.6
1,088,714	+		OKGIIK_05025	0.51	-0.5
1,088,715	-		OKGIIK_05025	0.51	-0.5
1,088,715	-		OKGIIK_05025	0.51	-1.0
1,088,715	-		OKGIIK_05025	0.51	-0.5
1,088,715	-		OKGIIK_05025	0.51	-0.3
1,088,715	-		OKGIIK_05025	0.51	-0.1
1,088,715	-		OKGIIK_05025	0.51	+1.0
1,088,798	+		OKGIIK_05025	0.67	-1.2
1,088,828	+		OKGIIK_05025	0.73	-0.2
1,088,828	+		OKGIIK_05025	0.73	+0.5
1,088,829	-		OKGIIK_05025	0.73	+0.5
1,089,004	-				+0.2
1,089,004	-				+0.6
1,089,004	-				-0.8
1,089,004	-				+1.7
1,089,071	+				+0.7
1,089,082	+				-1.7
1,089,082	+				-1.1
1,089,082	+				+1.0
1,089,082	+				-0.2
1,089,082	+				-0.3
1,089,082	+				+0.0
1,089,083	-				+1.4
1,089,083	-				+1.0
1,089,299	+		OKGIIK_05030	0.39	-1.7
1,089,299	+		OKGIIK_05030	0.39	-1.1
1,089,299	+		OKGIIK_05030	0.39	-0.2
1,089,299	+		OKGIIK_05030	0.39	-1.1
1,089,299	+		OKGIIK_05030	0.39	+0.2
1,089,299	+		OKGIIK_05030	0.39	-1.0
1,089,300	-		OKGIIK_05030	0.39	+1.2
1,089,300	-		OKGIIK_05030	0.39	+1.7
1,089,300	-		OKGIIK_05030	0.39	-0.4
1,089,300	-		OKGIIK_05030	0.39	-1.1
1,089,300	-		OKGIIK_05030	0.39	+0.0
1,089,300	-		OKGIIK_05030	0.39	+0.6
1,089,300	-		OKGIIK_05030	0.39	+1.6
1,089,300	-		OKGIIK_05030	0.39	-0.3
1,089,518	+		OKGIIK_05030	0.77	+0.2
1,089,518	+		OKGIIK_05030	0.77	+0.6
1,089,518	+		OKGIIK_05030	0.77	+2.2
1,089,518	+		OKGIIK_05030	0.77	-0.4
1,089,518	+		OKGIIK_05030	0.77	+0.0
1,089,518	+		OKGIIK_05030	0.77	-0.3
1,089,518	+		OKGIIK_05030	0.77	-0.1
1,089,518	+		OKGIIK_05030	0.77	+0.3
1,089,518	+		OKGIIK_05030	0.77	+0.7
1,089,519	-		OKGIIK_05030	0.77	+0.5
1,089,519	-		OKGIIK_05030	0.77	+1.0
1,089,519	-		OKGIIK_05030	0.77	-1.3
1,089,519	-		OKGIIK_05030	0.77	+0.2
1,089,519	-		OKGIIK_05030	0.77	-0.7
1,089,519	-		OKGIIK_05030	0.77	-0.9
1,089,519	-		OKGIIK_05030	0.77	-1.4
1,089,519	-		OKGIIK_05030	0.77	-1.1
1,089,702	+				-0.8
1,089,703	-				+1.0
1,090,115	+		OKGIIK_05035	0.46	-0.9
1,090,115	+		OKGIIK_05035	0.46	-0.5
1,090,115	+		OKGIIK_05035	0.46	+0.7
1,090,115	+		OKGIIK_05035	0.46	-1.7
1,090,115	+		OKGIIK_05035	0.46	+1.3
1,090,116	-		OKGIIK_05035	0.46	+0.6
1,090,116	-		OKGIIK_05035	0.46	-0.5
1,090,116	-		OKGIIK_05035	0.46	+1.5
1,090,116	-		OKGIIK_05035	0.46	+1.5
1,090,116	-		OKGIIK_05035	0.46	-0.8
1,090,116	-		OKGIIK_05035	0.46	-0.3
1,090,310	+		OKGIIK_05035	0.73	-0.5
1,090,310	+		OKGIIK_05035	0.73	-1.0
1,090,310	+		OKGIIK_05035	0.73	-0.7
1,090,310	+		OKGIIK_05035	0.73	+0.6
1,090,310	+		OKGIIK_05035	0.73	-0.1
1,090,311	-		OKGIIK_05035	0.73	-0.2
1,090,311	-		OKGIIK_05035	0.73	-0.3
1,090,311	-		OKGIIK_05035	0.73	+1.0
1,090,311	-		OKGIIK_05035	0.73	-0.5
1,090,311	-		OKGIIK_05035	0.73	+1.6
1,090,311	-		OKGIIK_05035	0.73	-1.7
1,090,311	-		OKGIIK_05035	0.73	-0.3
1,090,311	-		OKGIIK_05035	0.73	+0.3
1,090,311	-		OKGIIK_05035	0.73	-0.5
1,090,311	-		OKGIIK_05035	0.73	+5.8
1,090,311	-		OKGIIK_05035	0.73	+1.0
1,090,311	-		OKGIIK_05035	0.73	+0.0
1,090,311	-		OKGIIK_05035	0.73	-0.7
1,090,457	+				+1.7
1,090,457	+				-0.4
1,090,457	+				-1.7
1,090,457	+				-1.0
1,090,457	+				-0.1
1,090,458	-				-0.5
1,090,458	-				+0.2
1,090,458	-				+0.0
1,090,458	-				-0.1
1,090,458	-				+0.2
1,090,458	-				-0.2
1,090,458	-				-1.7
1,090,599	-		OKGIIK_05040	0.17	+0.4
1,090,600	+		OKGIIK_05040	0.17	-1.4
1,090,600	+		OKGIIK_05040	0.17	+0.6
1,090,600	+		OKGIIK_05040	0.17	+0.0
1,090,600	+		OKGIIK_05040	0.17	-0.1
1,090,600	+		OKGIIK_05040	0.17	-1.0
1,090,600	+		OKGIIK_05040	0.17	-1.0
1,090,600	+		OKGIIK_05040	0.17	-0.9
1,090,600	+		OKGIIK_05040	0.17	-0.7
1,090,600	+		OKGIIK_05040	0.17	+1.4
1,090,600	+		OKGIIK_05040	0.17	+0.0
1,090,601	-		OKGIIK_05040	0.18	+0.0
1,090,601	-		OKGIIK_05040	0.18	-0.3
1,090,601	-		OKGIIK_05040	0.18	+0.7
1,090,601	-		OKGIIK_05040	0.18	+0.5
1,090,601	-		OKGIIK_05040	0.18	-1.5