Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04855

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,054,863	+				-1.1
1,054,863	+				-0.8
1,054,863	+				-0.7
1,054,863	+				+0.1
1,054,864	-				+0.1
1,054,864	-				-1.8
1,054,864	-				-2.7
1,054,864	-				-0.3
1,055,167	+	trpA	OKGIIK_04850	0.38	-0.1
1,055,168	-	trpA	OKGIIK_04850	0.38	-0.5
1,055,383	+	trpA	OKGIIK_04850	0.65	-1.1
1,055,383	+	trpA	OKGIIK_04850	0.65	+0.5
1,055,384	-	trpA	OKGIIK_04850	0.65	-1.5
1,055,386	+	trpA	OKGIIK_04850	0.65	-0.5
1,055,386	+	trpA	OKGIIK_04850	0.65	+1.1
1,055,386	+	trpA	OKGIIK_04850	0.65	-2.1
1,055,386	+	trpA	OKGIIK_04850	0.65	+0.1
1,055,386	+	trpA	OKGIIK_04850	0.65	-1.9
1,055,386	+	trpA	OKGIIK_04850	0.65	+0.4
1,055,386	+	trpA	OKGIIK_04850	0.65	+0.1
1,055,386	+	trpA	OKGIIK_04850	0.65	-0.9
1,056,727	+				+0.1
1,056,728	-				+0.7
1,056,728	-				+0.2
1,056,728	-				+0.8
1,056,728	-				-1.1
1,056,815	+				-0.9
1,056,815	+				-0.3
1,056,815	+				-1.3
1,056,815	+				+0.1
1,056,815	+				+1.2
1,056,815	+				+0.1
1,056,815	+				+1.0
1,056,815	+				-0.3
1,056,815	+				-0.9
1,056,815	+				-1.6
1,056,815	+				+1.5
1,056,816	-				-0.2
1,056,816	-				-1.1
1,056,816	-				+0.6
1,056,816	-				+0.1
1,056,816	-				-0.5
1,056,816	-				+1.1
1,056,816	-				-2.5
1,056,816	-				-1.1
1,056,947	+				-0.3
1,056,947	+				-1.1
1,056,947	+				-0.3
1,056,947	+				-1.1
1,056,947	+				+0.2
1,056,947	+				-0.6
1,056,947	+				-0.3
1,056,947	+				+0.1
1,056,947	+				-0.6
1,056,948	-				+2.1
1,056,948	-				+0.7
1,056,948	-				+0.1
1,056,948	-				-0.5
1,056,948	-				+0.7
1,056,948	-				-0.3
1,056,948	-				+0.3
1,056,948	-				-0.6
1,056,948	-				-2.2
1,056,948	-				+0.3
1,056,948	-				-1.9
1,056,948	-				+0.2
1,056,948	-				+0.6
1,056,948	-				+2.1
1,056,948	-				-0.3
1,056,948	-				-0.5
1,056,948	-				-1.1
1,056,952	+				-0.1
1,056,953	-				+0.3
1,056,953	-				+0.5
1,056,953	-				-0.8
1,057,094	+		OKGIIK_04860	0.15	-0.0
1,057,095	-		OKGIIK_04860	0.15	+0.3
1,057,170	-		OKGIIK_04860	0.28	-0.9
1,057,170	-		OKGIIK_04860	0.28	+0.1
1,057,212	+		OKGIIK_04860	0.35	-0.3
1,057,212	+		OKGIIK_04860	0.35	+0.7
1,057,212	+		OKGIIK_04860	0.35	+0.5
1,057,213	-		OKGIIK_04860	0.36	-1.2
1,057,213	-		OKGIIK_04860	0.36	-1.4
1,057,213	-		OKGIIK_04860	0.36	+0.0
1,057,319	+		OKGIIK_04860	0.54	-0.2
1,057,319	+		OKGIIK_04860	0.54	-1.9
1,057,320	-		OKGIIK_04860	0.55	-0.8
1,057,416	-		OKGIIK_04860	0.72	+1.6