Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02776

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
7,905	+		MPMX19_02775	0.30	-1.1
7,905	+		MPMX19_02775	0.30	-1.6
7,905	+		MPMX19_02775	0.30	-0.9
7,905	+		MPMX19_02775	0.30	+0.1
7,905	+		MPMX19_02775	0.30	-1.4
7,905	+		MPMX19_02775	0.30	-0.1
7,905	+		MPMX19_02775	0.30	-0.6
7,905	+		MPMX19_02775	0.30	-0.7
7,905	+		MPMX19_02775	0.30	-0.6
7,905	+		MPMX19_02775	0.30	-1.3
7,906	-		MPMX19_02775	0.30	+0.5
7,906	-		MPMX19_02775	0.30	-1.7
7,906	-		MPMX19_02775	0.30	+0.6
7,906	-		MPMX19_02775	0.30	-0.9
7,906	-		MPMX19_02775	0.30	-1.3
7,957	-		MPMX19_02775	0.34	+0.4
7,957	-		MPMX19_02775	0.34	+0.9
7,957	-		MPMX19_02775	0.34	+0.0
7,957	-		MPMX19_02775	0.34	-0.9
7,957	-		MPMX19_02775	0.34	+0.7
7,957	-		MPMX19_02775	0.34	-1.7
7,957	-		MPMX19_02775	0.34	-1.6
7,974	+		MPMX19_02775	0.36	-2.1
7,974	+		MPMX19_02775	0.36	-1.4
7,974	+		MPMX19_02775	0.36	-1.1
7,974	+		MPMX19_02775	0.36	-0.4
7,974	+		MPMX19_02775	0.36	+0.4
7,974	+		MPMX19_02775	0.36	-0.6
7,974	+		MPMX19_02775	0.36	-0.0
7,974	+		MPMX19_02775	0.36	-0.1
7,975	-		MPMX19_02775	0.36	+0.5
8,016	+		MPMX19_02775	0.40	-0.7
8,016	+		MPMX19_02775	0.40	-0.1
8,016	+		MPMX19_02775	0.40	-0.1
8,016	+		MPMX19_02775	0.40	-1.2
8,016	+		MPMX19_02775	0.40	+0.0
8,017	-		MPMX19_02775	0.40	+0.2
8,017	-		MPMX19_02775	0.40	+1.6
8,017	-		MPMX19_02775	0.40	+0.5
8,017	-		MPMX19_02775	0.40	-0.1
8,017	-		MPMX19_02775	0.40	+1.3
8,017	-		MPMX19_02775	0.40	+1.7
8,017	-		MPMX19_02775	0.40	+0.1
8,226	+		MPMX19_02775	0.59	-0.8
8,226	+		MPMX19_02775	0.59	+0.2
8,226	+		MPMX19_02775	0.59	+0.1
8,227	-		MPMX19_02775	0.59	+0.7
8,227	-		MPMX19_02775	0.59	+0.2
8,242	-		MPMX19_02775	0.60	-0.6
8,242	-		MPMX19_02775	0.60	+1.2
8,301	+		MPMX19_02775	0.65	+0.5
8,301	+		MPMX19_02775	0.65	-0.1
8,302	-		MPMX19_02775	0.65	-1.2
8,302	-		MPMX19_02775	0.65	+0.9
8,302	-		MPMX19_02775	0.65	-0.4
8,319	+		MPMX19_02775	0.67	-1.0
8,319	+		MPMX19_02775	0.67	-0.1
8,319	+		MPMX19_02775	0.67	-1.5
8,319	+		MPMX19_02775	0.67	-0.4
8,320	-		MPMX19_02775	0.67	+0.3
8,321	+		MPMX19_02775	0.67	-1.7
8,322	-		MPMX19_02775	0.67	-1.1
8,322	-		MPMX19_02775	0.67	+0.7
8,322	-		MPMX19_02775	0.67	-0.9
8,322	-		MPMX19_02775	0.67	+0.6
8,481	+		MPMX19_02775	0.82	+0.1
8,481	+		MPMX19_02775	0.82	-0.9
8,481	+		MPMX19_02775	0.82	+0.7
8,481	+		MPMX19_02775	0.82	-0.6
8,481	+		MPMX19_02775	0.82	+0.5
8,481	+		MPMX19_02775	0.82	-1.6
8,481	+		MPMX19_02775	0.82	-0.5
8,482	-		MPMX19_02775	0.82	+0.3
8,482	-		MPMX19_02775	0.82	-0.8
8,482	-		MPMX19_02775	0.82	+0.3
8,482	-		MPMX19_02775	0.82	+0.7
8,482	-		MPMX19_02775	0.82	-0.3
8,482	-		MPMX19_02775	0.82	+0.3
8,482	-		MPMX19_02775	0.82	-0.2
8,482	-		MPMX19_02775	0.82	-0.7
8,482	-		MPMX19_02775	0.82	-1.3
8,749	+				-0.6
8,749	+				-0.6
8,749	+				+1.5
8,749	+				+1.5
8,749	+				-0.6
8,749	+				-0.4
8,749	+				+0.4
8,749	+				-1.6
8,749	+				-0.8
8,749	+				+0.1
8,749	+				-0.2
8,749	+				-0.7
8,749	+				-0.6
8,750	-				-1.6
8,750	-				-1.3
8,750	-				+1.0
8,750	-				+0.5
8,750	-				-0.5
8,750	-				-1.3
8,750	-				-1.6
8,750	-				-0.1
8,750	-				-1.1
8,750	-				+1.3
8,750	-				-0.9
8,750	-				-1.9
8,750	-				-0.5
8,752	+				-0.4
8,752	+				+0.5
8,752	+				-0.1
8,752	+				-0.9
8,752	+				-0.5
8,753	-				-0.7
8,753	-				-1.7
8,753	-				-0.2
8,753	-				-1.6
8,753	-				+1.3
8,794	+				+0.1
8,794	+				-0.6
8,794	+				-0.3
8,794	+				-2.4
8,794	+				+1.1
8,795	-				-0.7
8,795	-				+0.6
8,795	-				-0.4
8,795	-				-0.9
8,795	-				+0.7
8,795	-				+1.0
8,795	-				+1.3
8,869	+		MPMX19_02776	0.14	+0.1
8,869	+		MPMX19_02776	0.14	+1.1
8,869	+		MPMX19_02776	0.14	-0.2
8,869	+		MPMX19_02776	0.14	-0.0
8,869	+		MPMX19_02776	0.14	+1.1
8,870	-		MPMX19_02776	0.15	+0.5
8,870	-		MPMX19_02776	0.15	-1.3
9,145	+		MPMX19_02776	0.45	-1.9
9,145	+		MPMX19_02776	0.45	+0.2
9,146	-		MPMX19_02776	0.45	-0.1
9,146	-		MPMX19_02776	0.45	+1.2
9,244	+		MPMX19_02776	0.55	-0.1
9,244	+		MPMX19_02776	0.55	+0.2
9,244	+		MPMX19_02776	0.55	-0.2
9,244	+		MPMX19_02776	0.55	+1.9
9,245	-		MPMX19_02776	0.56	-0.1
9,245	-		MPMX19_02776	0.56	-0.1
9,245	-		MPMX19_02776	0.56	+0.6
9,245	-		MPMX19_02776	0.56	+1.7
9,245	-		MPMX19_02776	0.56	-1.0
9,245	-		MPMX19_02776	0.56	-1.1
9,245	-		MPMX19_02776	0.56	-0.2
9,245	-		MPMX19_02776	0.56	-2.4
9,245	-		MPMX19_02776	0.56	-0.3
9,245	-		MPMX19_02776	0.56	-0.0
9,313	+		MPMX19_02776	0.63	+0.2
9,313	+		MPMX19_02776	0.63	+1.0
9,313	+		MPMX19_02776	0.63	-0.9
9,313	+		MPMX19_02776	0.63	-0.4
9,313	+		MPMX19_02776	0.63	-0.6
9,314	-		MPMX19_02776	0.63	-1.4
9,314	-		MPMX19_02776	0.63	-0.4
9,314	-		MPMX19_02776	0.63	+0.1
9,403	+		MPMX19_02776	0.73	-1.9
9,403	+		MPMX19_02776	0.73	-1.4
9,403	+		MPMX19_02776	0.73	-1.0
9,403	+		MPMX19_02776	0.73	-0.2
9,403	+		MPMX19_02776	0.73	+0.3
9,403	+		MPMX19_02776	0.73	-0.2
9,403	+		MPMX19_02776	0.73	+0.2
9,403	+		MPMX19_02776	0.73	-2.1
9,403	+		MPMX19_02776	0.73	-1.0
9,403	+		MPMX19_02776	0.73	-0.3
9,403	+		MPMX19_02776	0.73	-1.3
9,403	+		MPMX19_02776	0.73	+0.2
9,403	+		MPMX19_02776	0.73	-1.1
9,403	+		MPMX19_02776	0.73	+1.0
9,403	+		MPMX19_02776	0.73	+0.2
9,404	-		MPMX19_02776	0.73	-0.3
9,404	-		MPMX19_02776	0.73	-0.6
9,404	-		MPMX19_02776	0.73	-1.4
9,404	-		MPMX19_02776	0.73	+0.2
9,404	-		MPMX19_02776	0.73	+0.4
9,404	-		MPMX19_02776	0.73	-0.0
9,404	-		MPMX19_02776	0.73	-0.4
9,404	-		MPMX19_02776	0.73	+0.3
9,404	-		MPMX19_02776	0.73	+0.3
9,404	-		MPMX19_02776	0.73	-1.4
9,404	-		MPMX19_02776	0.73	+0.4
9,406	+		MPMX19_02776	0.73	-0.5
9,406	+		MPMX19_02776	0.73	-0.0
9,406	+		MPMX19_02776	0.73	+0.1
9,406	+		MPMX19_02776	0.73	+0.9
9,406	+		MPMX19_02776	0.73	-0.4
9,407	-		MPMX19_02776	0.73	-1.1
9,407	-		MPMX19_02776	0.73	-0.6
9,407	-		MPMX19_02776	0.73	+1.1
9,580	+				-0.8
9,580	+				-0.6
9,581	-				-0.3
9,767	+		MPMX19_02777	0.12	-0.4
9,767	+		MPMX19_02777	0.12	-0.5
9,767	+		MPMX19_02777	0.12	+0.3
9,767	+		MPMX19_02777	0.12	-0.0
9,767	+		MPMX19_02777	0.12	-0.3
9,767	+		MPMX19_02777	0.12	-0.8
9,767	+		MPMX19_02777	0.12	-0.7
9,768	-		MPMX19_02777	0.12	+0.9
9,768	-		MPMX19_02777	0.12	-1.9
9,768	-		MPMX19_02777	0.12	-1.7
9,768	-		MPMX19_02777	0.12	-0.1
9,768	-		MPMX19_02777	0.12	+1.0
9,768	-		MPMX19_02777	0.12	+1.4
9,768	-		MPMX19_02777	0.12	-0.1
9,875	+		MPMX19_02777	0.23	-0.1
9,875	+		MPMX19_02777	0.23	-1.2
9,875	+		MPMX19_02777	0.23	+0.7
9,875	+		MPMX19_02777	0.23	-0.3
9,876	-		MPMX19_02777	0.23	-0.0
9,876	-		MPMX19_02777	0.23	-1.1
9,876	-		MPMX19_02777	0.23	-0.3
9,876	-		MPMX19_02777	0.23	-0.6
9,891	-		MPMX19_02777	0.24	-0.0
10,016	+		MPMX19_02777	0.36	-1.9
10,016	+		MPMX19_02777	0.36	+1.0
10,017	-		MPMX19_02777	0.36	+1.7
10,017	-		MPMX19_02777	0.36	-0.1
10,017	-		MPMX19_02777	0.36	+1.1
10,017	-		MPMX19_02777	0.36	-1.4
10,055	+		MPMX19_02777	0.40	+1.4
10,055	+		MPMX19_02777	0.40	+1.3
10,055	+		MPMX19_02777	0.40	+0.6
10,055	+		MPMX19_02777	0.40	+1.0
10,056	-		MPMX19_02777	0.40	-2.0
10,056	-		MPMX19_02777	0.40	-0.9
10,056	-		MPMX19_02777	0.40	+0.4
10,056	-		MPMX19_02777	0.40	+0.4
10,056	-		MPMX19_02777	0.40	+1.5
10,163	+		MPMX19_02777	0.50	-0.7
10,164	-		MPMX19_02777	0.50	-0.3
10,166	+		MPMX19_02777	0.50	-1.2
10,166	+		MPMX19_02777	0.50	-0.3
10,166	+		MPMX19_02777	0.50	+0.2
10,166	+		MPMX19_02777	0.50	-1.4
10,166	+		MPMX19_02777	0.50	-0.3
10,166	+		MPMX19_02777	0.50	-1.4
10,166	+		MPMX19_02777	0.50	+0.5
10,166	+		MPMX19_02777	0.50	-0.4
10,166	+		MPMX19_02777	0.50	-0.3
10,166	+		MPMX19_02777	0.50	-0.3
10,167	-		MPMX19_02777	0.50	+0.5
10,167	-		MPMX19_02777	0.50	+1.3
10,167	-		MPMX19_02777	0.50	-0.7
10,167	-		MPMX19_02777	0.50	+0.7
10,167	-		MPMX19_02777	0.50	+0.4
10,167	-		MPMX19_02777	0.50	+0.1
10,167	-		MPMX19_02777	0.50	+1.4
10,167	-		MPMX19_02777	0.50	-0.4
10,167	-		MPMX19_02777	0.50	+0.6
10,226	+		MPMX19_02777	0.56	+1.4
10,226	+		MPMX19_02777	0.56	-1.6
10,226	+		MPMX19_02777	0.56	+0.2
10,226	+		MPMX19_02777	0.56	+0.0
10,226	+		MPMX19_02777	0.56	-2.3
10,226	+		MPMX19_02777	0.56	+0.6
10,226	+		MPMX19_02777	0.56	-0.6
10,226	+		MPMX19_02777	0.56	-0.6
10,227	-		MPMX19_02777	0.56	-0.2
10,227	-		MPMX19_02777	0.56	+0.4
10,227	-		MPMX19_02777	0.56	+0.5
10,227	-		MPMX19_02777	0.56	+2.3
10,227	-		MPMX19_02777	0.56	+0.6
10,227	-		MPMX19_02777	0.56	-0.5
10,230	-		MPMX19_02777	0.56	-0.1
10,376	+		MPMX19_02777	0.70	-1.1
10,376	+		MPMX19_02777	0.70	-0.9
10,376	+		MPMX19_02777	0.70	+0.7
10,376	+		MPMX19_02777	0.70	-0.5
10,376	+		MPMX19_02777	0.70	-0.7
10,376	+		MPMX19_02777	0.70	+1.1
10,377	-		MPMX19_02777	0.70	-1.3
10,377	-		MPMX19_02777	0.70	+1.2
10,377	-		MPMX19_02777	0.70	-0.4
10,377	-		MPMX19_02777	0.70	+0.8
10,377	-		MPMX19_02777	0.70	-0.0
10,377	-		MPMX19_02777	0.70	+0.4
10,377	-		MPMX19_02777	0.70	-1.6