Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02426

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,546,503	-				-0.4
2,546,503	-				+0.6
2,546,503	-				-1.3
2,546,503	-				+0.7
2,546,503	-				-1.4
2,546,503	-				-1.4
2,546,503	-				+1.9
2,546,503	-				-0.9
2,546,503	-				-0.7
2,546,503	-				-2.3
2,546,503	-				+1.9
2,546,503	-				-0.2
2,546,503	-				-0.0
2,546,503	-				-2.2
2,546,505	-				+0.5
2,546,505	-				+0.9
2,546,505	-				-1.4
2,546,505	-				+0.6
2,546,505	-				-0.7
2,546,505	-				+0.1
2,546,505	-				-0.6
2,546,505	-				-2.3
2,546,534	+				-1.3
2,546,534	+				+0.7
2,546,534	+				-2.6
2,546,534	+				+2.1
2,546,534	+				+0.9
2,546,534	+				+0.9
2,546,534	+				-1.0
2,546,534	+				-1.3
2,546,534	+				+0.3
2,546,534	+				-0.9
2,546,534	+				-0.1
2,546,534	+				+0.8
2,546,534	+				-1.2
2,546,534	+				-0.9
2,546,534	+				-1.5
2,546,534	+				+0.3
2,546,534	+				+0.6
2,546,534	+				+1.2
2,546,535	-				-0.5
2,546,535	-				+0.7
2,546,535	-				-1.3
2,546,535	-				-0.0
2,546,535	-				-1.8
2,546,535	-				+1.2
2,546,535	-				+0.9
2,546,535	-				+0.1
2,546,535	-				+0.0
2,546,535	-				-1.3
2,546,535	-				-0.3
2,546,535	-				+0.1
2,546,535	-				+0.9
2,546,535	-				+1.7
2,546,535	-				-0.1
2,546,535	-				-0.6
2,546,535	-				+0.6
2,546,535	-				-0.4
2,546,535	-				-0.4
2,546,535	-				+0.4
2,546,622	+				-0.7
2,546,622	+				-1.5
2,546,622	+				-0.8
2,546,622	+				+1.3
2,546,622	+				-0.7
2,546,622	+				+1.1
2,546,622	+				-0.8
2,546,622	+				-1.4
2,546,622	+				+0.9
2,546,622	+				+0.6
2,546,623	-				+1.6
2,546,623	-				+1.9
2,546,623	-				-1.1
2,546,623	-				+1.5
2,546,623	-				-0.4
2,546,623	-				+0.7
2,546,623	-				-1.4
2,546,623	-				-1.7
2,546,623	-				-1.4
2,546,623	-				-0.5
2,546,812	+		MPMX19_02426	0.78	+1.1
2,546,812	+		MPMX19_02426	0.78	+0.1
2,546,812	+		MPMX19_02426	0.78	-0.2
2,546,812	+		MPMX19_02426	0.78	+0.4
2,546,812	+		MPMX19_02426	0.78	+0.4
2,546,812	+		MPMX19_02426	0.78	-0.4
2,546,812	+		MPMX19_02426	0.78	-2.4
2,546,812	+		MPMX19_02426	0.78	+1.2
2,546,812	+		MPMX19_02426	0.78	-1.0
2,546,812	+		MPMX19_02426	0.78	+0.1
2,546,813	-		MPMX19_02426	0.78	-0.1
2,546,813	-		MPMX19_02426	0.78	+0.0
2,546,813	-		MPMX19_02426	0.78	+1.6
2,546,813	-		MPMX19_02426	0.78	+0.8
2,546,813	-		MPMX19_02426	0.78	-1.1
2,546,813	-		MPMX19_02426	0.78	-0.4
2,546,813	-		MPMX19_02426	0.78	+0.7
2,546,813	-		MPMX19_02426	0.78	-0.4
2,546,813	-		MPMX19_02426	0.78	+0.4
2,546,813	-		MPMX19_02426	0.78	-2.2
2,546,813	-		MPMX19_02426	0.78	+1.9
2,546,813	-		MPMX19_02426	0.78	-0.4
2,546,813	-		MPMX19_02426	0.78	-0.9
2,546,813	-		MPMX19_02426	0.78	-0.7
2,546,813	-		MPMX19_02426	0.78	-0.2
2,546,813	-		MPMX19_02426	0.78	-0.1
2,546,830	+		MPMX19_02426	0.84	+0.8
2,546,830	+		MPMX19_02426	0.84	-0.1
2,546,830	+		MPMX19_02426	0.84	-0.7
2,546,830	+		MPMX19_02426	0.84	-0.9
2,546,830	+		MPMX19_02426	0.84	+0.6
2,546,830	+		MPMX19_02426	0.84	+1.9
2,546,831	-		MPMX19_02426	0.85	-0.4
2,546,831	-		MPMX19_02426	0.85	-1.3
2,546,831	-		MPMX19_02426	0.85	+0.2
2,546,832	+		MPMX19_02426	0.85	-1.5
2,546,832	+		MPMX19_02426	0.85	-1.0
2,546,832	+		MPMX19_02426	0.85	-0.4
2,546,832	+		MPMX19_02426	0.85	+1.0
2,546,832	+		MPMX19_02426	0.85	+0.3
2,546,832	+		MPMX19_02426	0.85	+0.5
2,546,832	+		MPMX19_02426	0.85	+0.3
2,546,832	+		MPMX19_02426	0.85	+2.5
2,546,832	+		MPMX19_02426	0.85	+0.9
2,546,832	+		MPMX19_02426	0.85	+0.5
2,546,832	+		MPMX19_02426	0.85	-1.3
2,546,832	+		MPMX19_02426	0.85	+1.2
2,546,832	+		MPMX19_02426	0.85	+0.0
2,546,832	+		MPMX19_02426	0.85	+0.9
2,546,833	-		MPMX19_02426	0.85	+1.1
2,546,833	-		MPMX19_02426	0.85	+0.2
2,546,833	-		MPMX19_02426	0.85	+0.7
2,546,833	-		MPMX19_02426	0.85	+0.4
2,546,833	-		MPMX19_02426	0.85	+0.2
2,546,833	-		MPMX19_02426	0.85	-0.5
2,546,833	-		MPMX19_02426	0.85	-0.4
2,547,097	+		MPMX19_02427	0.27	-1.2
2,547,097	+		MPMX19_02427	0.27	-0.2
2,547,097	+		MPMX19_02427	0.27	-0.3
2,547,097	+		MPMX19_02427	0.27	+0.7
2,547,098	-		MPMX19_02427	0.27	-1.3
2,547,098	-		MPMX19_02427	0.27	+0.6
2,547,178	+		MPMX19_02427	0.38	-0.4
2,547,178	+		MPMX19_02427	0.38	+0.0
2,547,178	+		MPMX19_02427	0.38	+0.2
2,547,178	+		MPMX19_02427	0.38	-0.8
2,547,178	+		MPMX19_02427	0.38	-2.1
2,547,179	-		MPMX19_02427	0.38	-1.8
2,547,179	-		MPMX19_02427	0.38	+1.4
2,547,247	+		MPMX19_02427	0.47	+0.9
2,547,247	+		MPMX19_02427	0.47	-0.1
2,547,247	+		MPMX19_02427	0.47	-0.7
2,547,247	+		MPMX19_02427	0.47	-0.2
2,547,248	-		MPMX19_02427	0.47	-0.1
2,547,248	-		MPMX19_02427	0.47	+0.7
2,547,346	+		MPMX19_02427	0.59	+0.9
2,547,346	+		MPMX19_02427	0.59	-0.9
2,547,346	+		MPMX19_02427	0.59	-0.3
2,547,346	+		MPMX19_02427	0.59	+0.2
2,547,346	+		MPMX19_02427	0.59	+2.4
2,547,346	+		MPMX19_02427	0.59	-2.6
2,547,347	-		MPMX19_02427	0.59	-0.1
2,547,347	-		MPMX19_02427	0.59	-0.8
2,547,746	+				-2.0
2,547,746	+				-1.6
2,547,746	+				+0.9
2,547,746	+				-0.0
2,547,746	+				-0.4
2,547,746	+				+0.0
2,547,746	+				-1.4
2,547,746	+				-0.7
2,547,746	+				-0.1
2,547,746	+				-0.1
2,547,746	+				-0.1
2,547,746	+				-1.1
2,547,746	+				-0.3
2,547,746	+				-0.4
2,547,747	-				-0.1
2,547,747	-				-1.2
2,547,747	-				+0.6
2,547,747	-				-1.3
2,547,747	-				-0.4
2,547,747	-				-0.9
2,547,747	-				-1.8
2,547,747	-				-2.6
2,547,747	-				+0.1
2,547,747	-				-1.1
2,547,747	-				+0.1
2,547,747	-				-1.6
2,547,747	-				+0.5
2,547,747	-				-0.2
2,547,747	-				-0.8
2,547,747	-				+1.3
2,547,748	+				-0.2
2,547,748	+				-0.3
2,547,748	+				-0.3
2,547,748	+				-0.7
2,547,748	+				-0.3
2,547,748	+				-0.7
2,547,748	+				-0.9
2,547,748	+				+0.2
2,547,748	+				+0.6
2,547,748	+				+0.5
2,547,748	+				-2.3
2,547,748	+				-0.4
2,547,748	+				-0.1
2,547,748	+				-1.2
2,547,748	+				-0.1
2,547,748	+				-1.9
2,547,748	+				-0.4
2,547,748	+				-0.6
2,547,748	+				+0.9
2,547,749	-				-0.5
2,547,749	-				+0.1
2,547,749	-				-0.8
2,547,749	-				-0.3
2,547,749	-				+0.8
2,547,749	-				-1.3
2,547,749	-				-1.3
2,547,749	-				-0.8
2,547,749	-				+0.0
2,547,749	-				-1.9
2,547,749	-				-1.3
2,547,749	-				-0.8
2,547,749	-				+0.3
2,547,749	-				-1.1
2,547,749	-				-0.2
2,547,749	-				-0.3
2,547,799	+				-2.4
2,547,799	+				-1.9
2,547,799	+				+1.4
2,547,799	+				+0.5
2,547,799	+				-0.4
2,547,799	+				+1.5
2,547,799	+				-0.7
2,547,799	+				-1.0
2,547,799	+				+0.5
2,547,799	+				+0.0
2,547,799	+				-1.1
2,547,799	+				-1.5
2,547,799	+				-1.0
2,547,799	+				-0.3
2,547,799	+				-0.8
2,547,799	+				+0.2
2,547,799	+				+0.4
2,547,799	+				+0.4
2,547,800	-				-1.3
2,547,800	-				+0.5
2,547,800	-				+0.1
2,547,800	-				+0.3
2,547,800	-				-0.3
2,547,800	-				+1.2
2,547,800	-				-0.4
2,547,800	-				-0.4
2,547,800	-				+0.5
2,547,800	-				-0.1
2,547,800	-				+0.2
2,547,800	-				-1.1
2,547,800	-				-0.9
2,547,800	-				-0.1
2,547,800	-				-0.7
2,547,800	-				-0.9
2,547,800	-				-1.3
2,547,800	-				+0.9
2,547,800	-				-0.3
2,547,800	-				-0.7
2,547,800	-				-1.9
2,547,820	+		MPMX19_02428	0.15	+0.3
2,547,820	+		MPMX19_02428	0.15	-0.3
2,547,820	+		MPMX19_02428	0.15	+0.5
2,547,821	-		MPMX19_02428	0.15	-0.0
2,547,821	-		MPMX19_02428	0.15	+1.3
2,547,821	-		MPMX19_02428	0.15	+0.6
2,547,821	-		MPMX19_02428	0.15	-0.2
2,547,821	-		MPMX19_02428	0.15	-1.4
2,547,821	-		MPMX19_02428	0.15	+0.8
2,547,865	+		MPMX19_02428	0.32	-0.6
2,547,865	+		MPMX19_02428	0.32	-1.1
2,547,865	+		MPMX19_02428	0.32	-0.1
2,547,865	+		MPMX19_02428	0.32	-0.8
2,547,865	+		MPMX19_02428	0.32	-0.3
2,547,865	+		MPMX19_02428	0.32	-0.1
2,547,865	+		MPMX19_02428	0.32	-1.1
2,547,865	+		MPMX19_02428	0.32	-2.3
2,547,865	+		MPMX19_02428	0.32	+0.6
2,547,865	+		MPMX19_02428	0.32	-0.9
2,547,865	+		MPMX19_02428	0.32	+0.3
2,547,865	+		MPMX19_02428	0.32	-1.2
2,547,865	+		MPMX19_02428	0.32	-1.5
2,547,865	+		MPMX19_02428	0.32	+0.8
2,547,865	+		MPMX19_02428	0.32	-0.9
2,547,865	+		MPMX19_02428	0.32	+1.0
2,547,865	+		MPMX19_02428	0.32	+1.5
2,547,865	+		MPMX19_02428	0.32	+0.4
2,547,865	+		MPMX19_02428	0.32	-1.4
2,547,865	+		MPMX19_02428	0.32	-1.5
2,547,865	+		MPMX19_02428	0.32	-0.5
2,547,865	+		MPMX19_02428	0.32	-1.3
2,547,865	+		MPMX19_02428	0.32	+0.5
2,547,865	+		MPMX19_02428	0.32	-0.9
2,547,865	+		MPMX19_02428	0.32	-0.2
2,547,866	-		MPMX19_02428	0.32	+0.5
2,547,866	-		MPMX19_02428	0.32	+0.1
2,547,866	-		MPMX19_02428	0.32	-1.4
2,547,866	-		MPMX19_02428	0.32	+0.2
2,547,866	-		MPMX19_02428	0.32	-0.4
2,547,866	-		MPMX19_02428	0.32	+1.6
2,547,866	-		MPMX19_02428	0.32	-1.3
2,547,866	-		MPMX19_02428	0.32	-0.3
2,547,866	-		MPMX19_02428	0.32	-0.4
2,547,866	-		MPMX19_02428	0.32	+0.7
2,547,866	-		MPMX19_02428	0.32	+0.6
2,547,866	-		MPMX19_02428	0.32	+1.2
2,547,866	-		MPMX19_02428	0.32	+1.4
2,547,866	-		MPMX19_02428	0.32	-0.6
2,547,866	-		MPMX19_02428	0.32	+0.6
2,547,866	-		MPMX19_02428	0.32	-0.3
2,547,866	-		MPMX19_02428	0.32	-0.2
2,547,866	-		MPMX19_02428	0.32	-0.0
2,547,866	-		MPMX19_02428	0.32	-1.4
2,547,866	-		MPMX19_02428	0.32	-0.4
2,547,866	-		MPMX19_02428	0.32	-0.4
2,547,866	-		MPMX19_02428	0.32	-1.6
2,547,866	-		MPMX19_02428	0.32	-1.4
2,547,866	-		MPMX19_02428	0.32	-0.8
2,547,866	-		MPMX19_02428	0.32	+0.5
2,547,866	-		MPMX19_02428	0.32	-1.1