Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02398

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,519,227	+				+0.6
2,519,227	+				-0.5
2,519,295	+				-1.4
2,519,295	+				+0.3
2,519,297	+				+1.4
2,519,297	+				+0.3
2,519,297	+				-0.2
2,519,631	+				+0.3
2,519,631	+				-0.9
2,519,631	+				-0.9
2,519,631	+				-2.4
2,519,631	+				-0.8
2,519,631	+				+0.8
2,519,631	+				-0.5
2,519,631	+				-0.4
2,519,631	+				+1.5
2,519,631	+				-2.1
2,519,631	+				-0.1
2,519,631	+				+0.9
2,519,631	+				+0.5
2,519,631	+				-0.3
2,519,631	+				+0.3
2,519,631	+				-0.3
2,519,631	+				-0.4
2,519,631	+				+0.3
2,519,631	+				-0.5
2,519,631	+				-1.3
2,519,631	+				-1.8
2,519,631	+				-1.0
2,519,632	-				-1.1
2,519,632	-				-2.4
2,519,632	-				-1.7
2,519,632	-				-1.1
2,519,632	-				+0.3
2,519,632	-				+1.0
2,519,632	-				-0.9
2,519,632	-				+0.7
2,519,632	-				-0.3
2,519,632	-				-0.2
2,519,632	-				-1.8
2,519,632	-				+0.6
2,519,632	-				-0.9
2,519,632	-				-1.6
2,519,632	-				+0.3
2,519,632	-				-0.3
2,519,632	-				-0.3
2,519,632	-				+1.1
2,519,633	+				-0.1
2,519,633	+				-0.2
2,519,633	+				-2.2
2,519,633	+				-1.3
2,519,633	+				-0.7
2,519,633	+				+1.2
2,519,633	+				-1.7
2,519,633	+				-0.1
2,519,633	+				-1.1
2,519,633	+				-0.4
2,519,633	+				+0.1
2,519,633	+				+0.3
2,519,633	+				-0.2
2,519,633	+				+0.1
2,519,633	+				-1.1
2,519,633	+				+0.9
2,519,633	+				+0.1
2,519,633	+				-0.7
2,519,633	+				+0.6
2,519,633	+				-1.1
2,519,633	+				+1.5
2,519,633	+				-1.4
2,519,633	+				-1.1
2,519,633	+				+0.2
2,519,633	+				+0.9
2,519,633	+				-1.0
2,519,633	+				-0.4
2,519,633	+				-2.9
2,519,633	+				-0.3
2,519,633	+				+0.3
2,519,633	+				-1.0
2,519,634	-				-2.3
2,519,634	-				+0.9
2,519,634	-				+1.6
2,519,634	-				+0.9
2,519,634	-				+0.7
2,519,634	-				-0.7
2,519,634	-				-1.1
2,519,634	-				-0.2
2,519,634	-				-0.2
2,519,634	-				+0.3
2,519,634	-				+0.7
2,519,634	-				-1.1
2,519,634	-				-1.8
2,519,634	-				+1.1
2,519,634	-				-1.1
2,519,634	-				+0.6
2,519,634	-				+0.1
2,519,634	-				-1.6
2,519,634	-				+1.5
2,519,634	-				-0.7
2,519,634	-				+0.3
2,519,634	-				-0.5
2,519,634	-				+0.8
2,519,634	-				-0.6
2,519,634	-				-0.3
2,519,634	-				-1.6
2,519,634	-				+2.9
2,519,634	-				-0.5
2,519,634	-				-0.3
2,519,634	-				-0.6
2,519,634	-				-0.1
2,519,634	-				-0.3
2,519,634	-				-1.5
2,519,634	-				+0.7
2,519,915	+		MPMX19_02397	0.55	-0.7
2,519,915	+		MPMX19_02397	0.55	+2.5
2,519,915	+		MPMX19_02397	0.55	+0.3
2,519,916	-		MPMX19_02397	0.55	-1.1
2,519,916	-		MPMX19_02397	0.55	+0.6
2,519,916	-		MPMX19_02397	0.55	-2.0
2,519,960	+		MPMX19_02397	0.63	-0.1
2,519,960	+		MPMX19_02397	0.63	-0.9
2,519,960	+		MPMX19_02397	0.63	-1.0
2,519,961	-		MPMX19_02397	0.63	+0.4
2,519,961	-		MPMX19_02397	0.63	+0.1
2,519,961	-		MPMX19_02397	0.63	-0.1
2,519,961	-		MPMX19_02397	0.63	+0.1
2,520,153	-				-0.1
2,520,432	+		MPMX19_02398	0.12	-2.0
2,520,432	+		MPMX19_02398	0.12	+0.4
2,520,432	+		MPMX19_02398	0.12	+0.3
2,520,432	+		MPMX19_02398	0.12	+1.1
2,520,432	+		MPMX19_02398	0.12	-0.2
2,520,432	+		MPMX19_02398	0.12	+0.1
2,520,433	-		MPMX19_02398	0.12	+0.8
2,520,433	-		MPMX19_02398	0.12	+0.1
2,520,433	-		MPMX19_02398	0.12	-0.9
2,520,433	-		MPMX19_02398	0.12	+0.9
2,520,858	+		MPMX19_02398	0.30	+1.3
2,520,859	-		MPMX19_02398	0.30	-1.6
2,520,859	-		MPMX19_02398	0.30	-0.1
2,520,859	-		MPMX19_02398	0.30	-0.4
2,520,885	+		MPMX19_02398	0.31	+0.8
2,520,885	+		MPMX19_02398	0.31	-0.4
2,520,885	+		MPMX19_02398	0.31	-0.9
2,520,885	+		MPMX19_02398	0.31	+0.8
2,520,885	+		MPMX19_02398	0.31	-0.4
2,520,886	-		MPMX19_02398	0.31	+0.4
2,520,886	-		MPMX19_02398	0.31	-0.4
2,520,886	-		MPMX19_02398	0.31	-0.3
2,520,886	-		MPMX19_02398	0.31	+0.9
2,520,886	-		MPMX19_02398	0.31	-0.1
2,520,886	-		MPMX19_02398	0.31	-0.6
2,520,886	-		MPMX19_02398	0.31	+1.7
2,520,886	-		MPMX19_02398	0.31	+0.3
2,520,886	-		MPMX19_02398	0.31	-1.1
2,521,017	+		MPMX19_02398	0.37	+0.7
2,521,017	+		MPMX19_02398	0.37	+2.1
2,521,017	+		MPMX19_02398	0.37	+0.0
2,521,017	+		MPMX19_02398	0.37	+0.9
2,521,017	+		MPMX19_02398	0.37	+0.5
2,521,017	+		MPMX19_02398	0.37	+1.5
2,521,017	+		MPMX19_02398	0.37	+0.1
2,521,017	+		MPMX19_02398	0.37	-1.1
2,521,017	+		MPMX19_02398	0.37	+0.3
2,521,018	-		MPMX19_02398	0.37	+0.0
2,521,018	-		MPMX19_02398	0.37	+1.6
2,521,110	+		MPMX19_02398	0.41	+0.8
2,521,140	+		MPMX19_02398	0.42	+0.0
2,521,140	+		MPMX19_02398	0.42	+0.9
2,521,140	+		MPMX19_02398	0.42	-1.6
2,521,140	+		MPMX19_02398	0.42	+0.2
2,521,140	+		MPMX19_02398	0.42	+1.9
2,521,140	+		MPMX19_02398	0.42	-0.9
2,521,140	+		MPMX19_02398	0.42	+1.2
2,521,140	+		MPMX19_02398	0.42	-0.4
2,521,140	+		MPMX19_02398	0.42	+0.7
2,521,140	+		MPMX19_02398	0.42	+0.2
2,521,140	+		MPMX19_02398	0.42	-0.4
2,521,140	+		MPMX19_02398	0.42	+0.4
2,521,140	+		MPMX19_02398	0.42	-0.1
2,521,140	+		MPMX19_02398	0.42	+0.5
2,521,140	+		MPMX19_02398	0.42	-0.6
2,521,140	+		MPMX19_02398	0.42	+0.3
2,521,140	+		MPMX19_02398	0.42	+0.6
2,521,140	+		MPMX19_02398	0.42	+0.2
2,521,140	+		MPMX19_02398	0.42	-0.0
2,521,140	+		MPMX19_02398	0.42	-1.4
2,521,140	+		MPMX19_02398	0.42	-1.3
2,521,140	+		MPMX19_02398	0.42	-1.4
2,521,141	-		MPMX19_02398	0.42	-0.4
2,521,141	-		MPMX19_02398	0.42	-0.7
2,521,141	-		MPMX19_02398	0.42	+0.5
2,521,141	-		MPMX19_02398	0.42	+0.9
2,521,141	-		MPMX19_02398	0.42	-2.0
2,521,141	-		MPMX19_02398	0.42	-0.2
2,521,141	-		MPMX19_02398	0.42	-0.3
2,521,141	-		MPMX19_02398	0.42	+1.1
2,521,141	-		MPMX19_02398	0.42	+0.7
2,521,141	-		MPMX19_02398	0.42	-0.1
2,521,141	-		MPMX19_02398	0.42	-0.2
2,521,141	-		MPMX19_02398	0.42	+0.7
2,521,141	-		MPMX19_02398	0.42	-0.7
2,521,141	-		MPMX19_02398	0.42	-1.0
2,521,141	-		MPMX19_02398	0.42	-0.6
2,521,141	-		MPMX19_02398	0.42	-0.9
2,521,141	-		MPMX19_02398	0.42	+0.6
2,521,141	-		MPMX19_02398	0.42	-0.1
2,521,141	-		MPMX19_02398	0.42	+0.2
2,521,141	-		MPMX19_02398	0.42	-2.4
2,521,141	-		MPMX19_02398	0.42	+0.5
2,521,141	-		MPMX19_02398	0.42	-1.6
2,521,141	-		MPMX19_02398	0.42	-1.0
2,521,141	-		MPMX19_02398	0.42	-0.7
2,521,141	-		MPMX19_02398	0.42	+0.4
2,521,141	-		MPMX19_02398	0.42	-0.9
2,521,141	-		MPMX19_02398	0.42	+1.6
2,521,141	-		MPMX19_02398	0.42	+0.5
2,521,141	-		MPMX19_02398	0.42	-0.7
2,522,445	+				-0.1
2,522,445	+				-0.7
2,522,445	+				-0.3
2,522,445	+				-0.2
2,522,445	+				-1.4
2,522,445	+				-0.7
2,522,445	+				-1.2
2,522,445	+				+1.7
2,522,445	+				-2.0
2,522,445	+				-0.1
2,522,446	-				-1.4
2,522,446	-				+0.1
2,522,446	-				+0.3
2,522,446	-				+0.2
2,522,446	-				-1.1
2,522,446	-				+0.1
2,522,446	-				-0.0
2,522,446	-				+0.7
2,522,446	-				-0.6
2,522,446	-				-1.2
2,522,446	-				-0.9
2,522,446	-				-0.1
2,522,446	-				+0.0
2,522,556	+				-1.4
2,522,557	-				-0.8
2,522,569	-				-0.9
2,522,569	-				-1.4
2,522,639	+				-0.4
2,522,639	+				+0.0
2,522,639	+				+0.2
2,522,639	+				-1.1
2,522,639	+				-0.8
2,522,639	+				-0.7
2,522,639	+				-0.8
2,522,639	+				-1.4
2,522,639	+				-1.6
2,522,639	+				+0.6
2,522,639	+				-1.4
2,522,639	+				+0.3
2,522,639	+				-1.6
2,522,639	+				-1.2
2,522,639	+				-0.6
2,522,639	+				-1.8
2,522,639	+				+0.1
2,522,639	+				-1.1
2,522,639	+				-1.3
2,522,639	+				+1.3
2,522,639	+				-0.8
2,522,639	+				-1.0
2,522,639	+				+0.7
2,522,639	+				-1.4
2,522,639	+				+0.2
2,522,639	+				+2.2
2,522,640	-				-0.7
2,522,640	-				+1.9
2,522,640	-				-0.3
2,522,640	-				-1.8
2,522,640	-				-0.4
2,522,640	-				+1.2
2,522,640	-				+0.3
2,522,640	-				-0.1
2,522,640	-				-0.7
2,522,640	-				+0.4
2,522,640	-				+0.3
2,522,640	-				+0.3
2,522,640	-				-0.1
2,522,640	-				-1.8
2,522,640	-				+0.4
2,522,640	-				-1.9
2,522,640	-				-1.1
2,522,640	-				-0.4
2,522,640	-				-0.6
2,522,640	-				-1.4
2,522,640	-				-0.8
2,522,640	-				-0.4
2,522,640	-				+2.1
2,522,640	-				+0.6
2,522,640	-				-2.0
2,522,640	-				+0.0
2,522,640	-				+0.3
2,522,640	-				+0.2
2,522,640	-				+0.4
2,522,640	-				+0.6
2,522,640	-				+0.3
2,522,640	-				-1.3
2,522,640	-				+0.6
2,522,640	-				+0.6
2,522,640	-				-0.7
2,522,640	-				-1.1
2,522,640	-				-0.4
2,522,640	-				-1.1
2,522,640	-				-0.8
2,522,656	+				-0.3
2,522,656	+				-2.3
2,522,656	+				+1.0
2,522,657	-				-1.1
2,522,783	+				+0.6
2,522,784	-				-0.5
2,522,843	+				-1.1
2,522,951	+		MPMX19_02399	0.23	-0.9
2,522,951	+		MPMX19_02399	0.23	-0.4
2,522,951	+		MPMX19_02399	0.23	-0.6
2,522,951	+		MPMX19_02399	0.23	+0.3
2,522,951	+		MPMX19_02399	0.23	+0.3
2,522,951	+		MPMX19_02399	0.23	+0.2
2,522,951	+		MPMX19_02399	0.23	+1.4
2,522,951	+		MPMX19_02399	0.23	+0.8
2,522,951	+		MPMX19_02399	0.23	-1.1
2,522,951	+		MPMX19_02399	0.23	-0.1
2,522,952	-		MPMX19_02399	0.23	-0.3
2,522,952	-		MPMX19_02399	0.23	-0.7
2,522,952	-		MPMX19_02399	0.23	+0.4
2,522,952	-		MPMX19_02399	0.23	+0.2
2,522,952	-		MPMX19_02399	0.23	-1.1
2,522,952	-		MPMX19_02399	0.23	-0.3
2,522,952	-		MPMX19_02399	0.23	-0.8
2,522,952	-		MPMX19_02399	0.23	-0.1
2,522,952	-		MPMX19_02399	0.23	+0.5
2,522,952	-		MPMX19_02399	0.23	-0.2
2,522,972	+		MPMX19_02399	0.26	-1.2
2,522,972	+		MPMX19_02399	0.26	-0.4
2,522,972	+		MPMX19_02399	0.26	+0.0
2,522,972	+		MPMX19_02399	0.26	-1.3
2,522,972	+		MPMX19_02399	0.26	+1.1
2,522,972	+		MPMX19_02399	0.26	-0.8
2,522,972	+		MPMX19_02399	0.26	-0.6
2,522,972	+		MPMX19_02399	0.26	-0.4
2,522,972	+		MPMX19_02399	0.26	-0.6
2,522,972	+		MPMX19_02399	0.26	+0.3
2,522,972	+		MPMX19_02399	0.26	-0.7
2,522,972	+		MPMX19_02399	0.26	-1.1
2,522,972	+		MPMX19_02399	0.26	-1.1
2,522,972	+		MPMX19_02399	0.26	+0.9
2,522,972	+		MPMX19_02399	0.26	+1.5
2,522,972	+		MPMX19_02399	0.26	-0.1
2,522,972	+		MPMX19_02399	0.26	-0.2
2,522,972	+		MPMX19_02399	0.26	-0.7
2,522,972	+		MPMX19_02399	0.26	-0.4
2,522,972	+		MPMX19_02399	0.26	-2.4
2,522,972	+		MPMX19_02399	0.26	-1.6
2,522,972	+		MPMX19_02399	0.26	-0.6
2,522,972	+		MPMX19_02399	0.26	+0.7
2,522,972	+		MPMX19_02399	0.26	+0.5
2,522,972	+		MPMX19_02399	0.26	+0.4
2,522,972	+		MPMX19_02399	0.26	-0.0
2,522,972	+		MPMX19_02399	0.26	-1.1
2,522,972	+		MPMX19_02399	0.26	+0.4
2,522,972	+		MPMX19_02399	0.26	-0.6
2,522,972	+		MPMX19_02399	0.26	+0.6
2,522,972	+		MPMX19_02399	0.26	-1.3
2,522,972	+		MPMX19_02399	0.26	+0.5
2,522,972	+		MPMX19_02399	0.26	-1.2
2,522,972	+		MPMX19_02399	0.26	+0.3
2,522,972	+		MPMX19_02399	0.26	+1.0
2,522,972	+		MPMX19_02399	0.26	+0.3
2,522,972	+		MPMX19_02399	0.26	-0.0
2,522,973	-		MPMX19_02399	0.26	-0.5
2,522,973	-		MPMX19_02399	0.26	-0.3
2,522,973	-		MPMX19_02399	0.26	-0.4
2,522,973	-		MPMX19_02399	0.26	+0.6
2,522,973	-		MPMX19_02399	0.26	-0.4
2,522,973	-		MPMX19_02399	0.26	+0.1
2,522,973	-		MPMX19_02399	0.26	+0.2
2,522,973	-		MPMX19_02399	0.26	+0.6
2,522,973	-		MPMX19_02399	0.26	-0.8
2,522,973	-		MPMX19_02399	0.26	-0.1
2,522,973	-		MPMX19_02399	0.26	-0.9
2,522,973	-		MPMX19_02399	0.26	-0.4
2,522,973	-		MPMX19_02399	0.26	+0.1
2,522,973	-		MPMX19_02399	0.26	+0.9
2,522,973	-		MPMX19_02399	0.26	+0.8
2,522,973	-		MPMX19_02399	0.26	-0.0
2,522,973	-		MPMX19_02399	0.26	-0.2
2,522,973	-		MPMX19_02399	0.26	+1.0
2,522,973	-		MPMX19_02399	0.26	-0.3
2,522,973	-		MPMX19_02399	0.26	+0.3
2,522,973	-		MPMX19_02399	0.26	+0.3
2,522,973	-		MPMX19_02399	0.26	-1.8
2,522,973	-		MPMX19_02399	0.26	-2.3
2,522,973	-		MPMX19_02399	0.26	+0.6
2,522,973	-		MPMX19_02399	0.26	-0.1
2,522,973	-		MPMX19_02399	0.26	-0.1
2,522,973	-		MPMX19_02399	0.26	-0.9
2,522,973	-		MPMX19_02399	0.26	-0.6
2,522,973	-		MPMX19_02399	0.26	-0.7
2,522,973	-		MPMX19_02399	0.26	+0.1
2,522,973	-		MPMX19_02399	0.26	-0.1
2,522,973	-		MPMX19_02399	0.26	-2.3
2,522,973	-		MPMX19_02399	0.26	-2.0
2,522,973	-		MPMX19_02399	0.26	-0.5
2,522,973	-		MPMX19_02399	0.26	-0.9
2,522,973	-		MPMX19_02399	0.26	+0.1
2,522,973	-		MPMX19_02399	0.26	-1.6
2,522,973	-		MPMX19_02399	0.26	-0.1
2,522,973	-		MPMX19_02399	0.26	+0.4
2,522,973	-		MPMX19_02399	0.26	-1.5
2,522,973	-		MPMX19_02399	0.26	+0.0
2,522,973	-		MPMX19_02399	0.26	+0.6
2,522,973	-		MPMX19_02399	0.26	-0.1
2,522,973	-		MPMX19_02399	0.26	-0.1
2,523,164	+		MPMX19_02399	0.50	-0.9
2,523,164	+		MPMX19_02399	0.50	-1.6
2,523,164	+		MPMX19_02399	0.50	-0.4
2,523,164	+		MPMX19_02399	0.50	-0.6
2,523,164	+		MPMX19_02399	0.50	-0.7
2,523,164	+		MPMX19_02399	0.50	-0.3
2,523,164	+		MPMX19_02399	0.50	-0.5
2,523,164	+		MPMX19_02399	0.50	-0.2
2,523,164	+		MPMX19_02399	0.50	+1.1
2,523,164	+		MPMX19_02399	0.50	+0.1
2,523,164	+		MPMX19_02399	0.50	-0.2
2,523,164	+		MPMX19_02399	0.50	-1.3
2,523,164	+		MPMX19_02399	0.50	-0.2
2,523,164	+		MPMX19_02399	0.50	+0.1
2,523,164	+		MPMX19_02399	0.50	-0.6
2,523,165	-		MPMX19_02399	0.50	+0.0
2,523,165	-		MPMX19_02399	0.50	+0.4
2,523,165	-		MPMX19_02399	0.50	-0.4
2,523,165	-		MPMX19_02399	0.50	-2.1
2,523,165	-		MPMX19_02399	0.50	-0.6
2,523,165	-		MPMX19_02399	0.50	-1.3
2,523,165	-		MPMX19_02399	0.50	-0.3
2,523,165	-		MPMX19_02399	0.50	-1.0
2,523,165	-		MPMX19_02399	0.50	-1.7
2,523,165	-		MPMX19_02399	0.50	-0.0
2,523,165	-		MPMX19_02399	0.50	-0.6
2,523,191	+		MPMX19_02399	0.53	-1.1
2,523,191	+		MPMX19_02399	0.53	+0.1
2,523,191	+		MPMX19_02399	0.53	-1.7
2,523,191	+		MPMX19_02399	0.53	-0.1
2,523,191	+		MPMX19_02399	0.53	-1.7
2,523,191	+		MPMX19_02399	0.53	+0.0
2,523,192	-		MPMX19_02399	0.53	-0.1
2,523,192	-		MPMX19_02399	0.53	+0.9
2,523,263	+		MPMX19_02399	0.62	-1.6
2,523,263	+		MPMX19_02399	0.62	+0.9
2,523,263	+		MPMX19_02399	0.62	-0.7
2,523,263	+		MPMX19_02399	0.62	-0.9
2,523,263	+		MPMX19_02399	0.62	-0.3
2,523,264	-		MPMX19_02399	0.62	+0.9
2,523,264	-		MPMX19_02399	0.62	-1.4
2,523,440	+		MPMX19_02399	0.84	+0.2
2,523,440	+		MPMX19_02399	0.84	+0.3
2,523,440	+		MPMX19_02399	0.84	+1.3
2,523,440	+		MPMX19_02399	0.84	-0.4
2,523,440	+		MPMX19_02399	0.84	-0.3
2,523,440	+		MPMX19_02399	0.84	-1.9
2,523,441	-		MPMX19_02399	0.84	-0.3
2,523,441	-		MPMX19_02399	0.84	-2.0
2,523,441	-		MPMX19_02399	0.84	+0.3
2,523,441	-		MPMX19_02399	0.84	+1.1