Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02330

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,450,755	+				+2.1
2,450,755	+				-0.7
2,450,755	+				+1.9
2,450,755	+				-0.4
2,450,755	+				-1.3
2,450,755	+				-0.3
2,450,756	-				+1.1
2,450,756	-				-1.0
2,450,756	-				-0.7
2,450,756	-				-1.0
2,450,756	-				+1.9
2,450,756	-				-0.8
2,450,756	-				-0.8
2,450,756	-				-0.6
2,450,756	-				-0.9
2,450,760	+				+1.2
2,450,760	+				-0.1
2,450,760	+				-0.1
2,450,760	+				-0.6
2,450,761	-				+0.1
2,450,761	-				+1.9
2,450,761	-				+0.3
2,450,761	-				+0.0
2,450,770	+				-0.1
2,451,053	+		MPMX19_02329	0.33	+0.4
2,451,053	+		MPMX19_02329	0.33	-0.1
2,451,054	-		MPMX19_02329	0.33	+0.1
2,451,054	-		MPMX19_02329	0.33	-1.3
2,451,446	+		MPMX19_02329	0.82	-0.5
2,451,446	+		MPMX19_02329	0.82	-0.3
2,451,446	+		MPMX19_02329	0.82	+0.3
2,451,446	+		MPMX19_02329	0.82	+0.9
2,451,446	+		MPMX19_02329	0.82	-1.1
2,451,446	+		MPMX19_02329	0.82	+0.1
2,451,446	+		MPMX19_02329	0.82	-0.4
2,451,446	+		MPMX19_02329	0.82	+1.2
2,451,446	+		MPMX19_02329	0.82	-1.0
2,451,446	+		MPMX19_02329	0.82	-1.3
2,451,446	+		MPMX19_02329	0.82	-0.6
2,451,446	+		MPMX19_02329	0.82	+1.1
2,451,446	+		MPMX19_02329	0.82	-0.9
2,451,446	+		MPMX19_02329	0.82	-1.1
2,451,446	+		MPMX19_02329	0.82	-0.0
2,451,446	+		MPMX19_02329	0.82	+0.7
2,451,446	+		MPMX19_02329	0.82	+0.9
2,451,446	+		MPMX19_02329	0.82	+0.4
2,451,446	+		MPMX19_02329	0.82	-2.0
2,451,446	+		MPMX19_02329	0.82	-0.5
2,451,446	+		MPMX19_02329	0.82	+0.7
2,451,446	+		MPMX19_02329	0.82	+0.0
2,451,446	+		MPMX19_02329	0.82	-1.1
2,451,447	-		MPMX19_02329	0.82	-1.3
2,451,447	-		MPMX19_02329	0.82	-1.9
2,451,447	-		MPMX19_02329	0.82	+0.0
2,451,447	-		MPMX19_02329	0.82	+0.7
2,451,447	-		MPMX19_02329	0.82	-0.7
2,451,447	-		MPMX19_02329	0.82	-0.0
2,451,447	-		MPMX19_02329	0.82	-1.0
2,451,447	-		MPMX19_02329	0.82	-0.9
2,451,447	-		MPMX19_02329	0.82	+1.6
2,451,447	-		MPMX19_02329	0.82	-1.1
2,451,447	-		MPMX19_02329	0.82	+0.5
2,451,447	-		MPMX19_02329	0.82	+0.2
2,451,447	-		MPMX19_02329	0.82	-0.8
2,451,447	-		MPMX19_02329	0.82	-1.7
2,451,447	-		MPMX19_02329	0.82	+0.2
2,451,447	-		MPMX19_02329	0.82	-1.0
2,451,447	-		MPMX19_02329	0.82	-0.4
2,451,503	+		MPMX19_02329	0.89	+0.4
2,451,503	+		MPMX19_02329	0.89	+0.1
2,451,503	+		MPMX19_02329	0.89	-1.1
2,451,503	+		MPMX19_02329	0.89	-1.8
2,451,504	-		MPMX19_02329	0.90	-1.6
2,451,504	-		MPMX19_02329	0.90	-1.3
2,451,504	-		MPMX19_02329	0.90	-0.9
2,451,539	+				-0.9
2,451,539	+				-0.3
2,451,539	+				-0.9
2,451,539	+				-0.5
2,451,540	-				-0.6
2,451,540	-				+0.7
2,451,592	+				-1.1
2,451,592	+				-2.0
2,451,592	+				-2.6
2,451,592	+				-0.7
2,451,592	+				-0.3
2,451,592	+				+0.6
2,451,592	+				-1.2
2,451,592	+				-0.9
2,451,592	+				-2.4
2,451,592	+				-0.4
2,451,592	+				-0.6
2,451,592	+				-1.4
2,451,593	-				-1.4
2,451,593	-				+0.1
2,451,593	-				+0.5
2,451,593	-				-0.9
2,451,593	-				-0.5
2,451,633	+				+1.6
2,451,633	+				+0.3
2,451,634	-				-0.8
2,451,634	-				-1.1
2,451,634	-				+0.2
2,451,634	-				-1.1
2,451,699	+				-0.7
2,451,699	+				+0.2
2,451,699	+				+0.7
2,451,699	+				-1.1
2,451,699	+				-0.9
2,451,699	+				-0.7
2,451,699	+				-1.7
2,451,700	-				-1.5
2,451,700	-				-0.6
2,451,700	-				+0.3
2,451,724	+		MPMX19_02330	0.11	-1.1
2,451,724	+		MPMX19_02330	0.11	-1.1
2,451,724	+		MPMX19_02330	0.11	-0.1
2,451,724	+		MPMX19_02330	0.11	-0.4
2,451,724	+		MPMX19_02330	0.11	+1.5
2,451,724	+		MPMX19_02330	0.11	+0.3
2,451,724	+		MPMX19_02330	0.11	-1.8
2,451,724	+		MPMX19_02330	0.11	+0.3
2,451,724	+		MPMX19_02330	0.11	+0.7
2,451,724	+		MPMX19_02330	0.11	-1.8
2,451,725	-		MPMX19_02330	0.12	-1.1
2,451,725	-		MPMX19_02330	0.12	-0.4
2,451,725	-		MPMX19_02330	0.12	+0.0
2,451,725	-		MPMX19_02330	0.12	+0.7
2,451,727	+		MPMX19_02330	0.12	-0.9
2,451,727	+		MPMX19_02330	0.12	-0.8
2,451,727	+		MPMX19_02330	0.12	-0.1
2,451,727	+		MPMX19_02330	0.12	-0.9
2,451,727	+		MPMX19_02330	0.12	-0.1
2,451,727	+		MPMX19_02330	0.12	-2.4
2,451,727	+		MPMX19_02330	0.12	-0.4
2,451,727	+		MPMX19_02330	0.12	-1.3
2,451,728	-		MPMX19_02330	0.12	+0.5
2,451,728	-		MPMX19_02330	0.12	+0.4
2,451,728	-		MPMX19_02330	0.12	-0.1
2,451,728	-		MPMX19_02330	0.12	-0.0
2,451,859	+		MPMX19_02330	0.30	+1.5
2,451,859	+		MPMX19_02330	0.30	+2.6
2,451,859	+		MPMX19_02330	0.30	+0.4
2,451,859	+		MPMX19_02330	0.30	-2.1
2,451,859	+		MPMX19_02330	0.30	-0.7
2,451,859	+		MPMX19_02330	0.30	-0.8
2,451,859	+		MPMX19_02330	0.30	-0.3
2,451,859	+		MPMX19_02330	0.30	-1.6
2,451,859	+		MPMX19_02330	0.30	+0.1
2,451,859	+		MPMX19_02330	0.30	-1.4
2,451,859	+		MPMX19_02330	0.30	-1.6
2,451,859	+		MPMX19_02330	0.30	-0.5
2,451,859	+		MPMX19_02330	0.30	+0.0
2,451,860	-		MPMX19_02330	0.30	-1.3
2,451,860	-		MPMX19_02330	0.30	-0.0
2,451,860	-		MPMX19_02330	0.30	-1.8
2,451,860	-		MPMX19_02330	0.30	+0.1
2,452,204	+		MPMX19_02330	0.77	-0.7
2,452,204	+		MPMX19_02330	0.77	-1.1
2,452,204	+		MPMX19_02330	0.77	-0.2
2,452,204	+		MPMX19_02330	0.77	+0.9
2,452,204	+		MPMX19_02330	0.77	-0.4
2,452,205	-		MPMX19_02330	0.77	-1.0
2,452,205	-		MPMX19_02330	0.77	-1.3
2,452,205	-		MPMX19_02330	0.77	-1.1
2,452,205	-		MPMX19_02330	0.77	+0.9
2,452,205	-		MPMX19_02330	0.77	-0.7
2,452,205	-		MPMX19_02330	0.77	-1.3
2,452,392	+				+1.1
2,452,392	+				-0.0
2,452,392	+				-1.4
2,452,392	+				-0.4
2,452,392	+				+1.9
2,452,393	-				-0.4
2,452,393	-				-1.3
2,452,393	-				-1.1
2,452,393	-				-2.0
2,452,393	-				+0.4
2,452,393	-				-0.0
2,452,393	-				-1.3
2,452,393	-				+0.4
2,452,393	-				+0.6
2,452,393	-				+1.1
2,452,393	-				+0.0
2,452,393	-				-2.1
2,452,393	-				+1.1
2,452,393	-				-1.4
2,452,393	-				-1.3
2,452,393	-				+1.6
2,452,451	+				-1.4
2,452,452	-				+1.2
2,452,623	+				-0.1
2,452,623	+				-1.4
2,452,623	+				+1.2
2,452,623	+				-1.2
2,452,623	+				+0.0
2,452,623	+				-0.8
2,452,623	+				-0.7
2,452,623	+				-0.6
2,452,623	+				-1.7
2,452,623	+				-0.3
2,452,623	+				+1.6
2,452,623	+				-0.2
2,452,623	+				-0.0
2,452,623	+				+0.9
2,452,623	+				-0.0
2,452,623	+				-1.9
2,452,623	+				+0.2
2,452,623	+				-1.9
2,452,623	+				+0.0
2,452,623	+				+0.4
2,452,623	+				+1.4
2,452,623	+				+0.3
2,452,623	+				+0.7
2,452,623	+				+0.1
2,452,623	+				-2.5
2,452,623	+				-0.8
2,452,623	+				+0.9
2,452,623	+				+1.5
2,452,623	+				+0.9
2,452,623	+				-1.2
2,452,623	+				+0.1
2,452,623	+				-0.5
2,452,623	+				+0.1
2,452,623	+				-0.5
2,452,623	+				-0.3
2,452,623	+				+0.1
2,452,623	+				-0.2
2,452,623	+				-2.0
2,452,623	+				-0.7
2,452,624	-				+1.5
2,452,624	-				-0.2
2,452,624	-				+1.1
2,452,624	-				+0.0
2,452,624	-				-1.0
2,452,624	-				+0.4
2,452,624	-				-0.1
2,452,624	-				-0.1
2,452,624	-				-0.7
2,452,624	-				+0.6
2,452,624	-				+1.2
2,452,624	-				+0.7
2,452,624	-				-2.2
2,452,624	-				-0.4
2,452,624	-				-0.9
2,452,624	-				+0.1
2,452,624	-				-0.1
2,452,624	-				-1.4
2,452,624	-				+1.3
2,452,624	-				+0.1
2,452,624	-				-0.8
2,452,624	-				-0.6
2,452,624	-				+0.1
2,452,624	-				-0.7
2,452,624	-				-2.1
2,452,624	-				-0.7
2,452,624	-				+0.2
2,452,624	-				-0.4
2,452,624	-				+1.1
2,452,624	-				+0.9
2,452,624	-				-1.8
2,452,624	-				-0.7
2,452,624	-				+0.1
2,452,624	-				+0.3
2,452,624	-				-1.6
2,452,624	-				-0.1
2,452,624	-				-1.0
2,452,624	-				+1.0
2,452,624	-				-2.0
2,452,624	-				-0.6
2,452,624	-				-0.4
2,452,624	-				-0.5
2,452,624	-				-0.7
2,452,624	-				-0.2
2,452,783	+		MPMX19_02331	0.21	-0.2
2,452,783	+		MPMX19_02331	0.21	-0.7
2,452,783	+		MPMX19_02331	0.21	+1.3
2,452,783	+		MPMX19_02331	0.21	-0.5
2,452,783	+		MPMX19_02331	0.21	+1.7
2,452,783	+		MPMX19_02331	0.21	+0.2
2,452,783	+		MPMX19_02331	0.21	+0.5
2,452,783	+		MPMX19_02331	0.21	+0.9
2,452,783	+		MPMX19_02331	0.21	+1.0
2,452,783	+		MPMX19_02331	0.21	-1.6
2,452,783	+		MPMX19_02331	0.21	+0.9
2,452,783	+		MPMX19_02331	0.21	-0.4
2,452,783	+		MPMX19_02331	0.21	-0.4
2,452,783	+		MPMX19_02331	0.21	-0.9
2,452,783	+		MPMX19_02331	0.21	+1.3
2,452,783	+		MPMX19_02331	0.21	+0.6
2,452,783	+		MPMX19_02331	0.21	-0.4
2,452,783	+		MPMX19_02331	0.21	+0.3
2,452,783	+		MPMX19_02331	0.21	-0.6
2,452,783	+		MPMX19_02331	0.21	+1.6
2,452,783	+		MPMX19_02331	0.21	+0.9
2,452,784	-		MPMX19_02331	0.21	-0.6
2,452,784	-		MPMX19_02331	0.21	-2.2
2,452,784	-		MPMX19_02331	0.21	+0.0
2,452,784	-		MPMX19_02331	0.21	-0.4
2,452,784	-		MPMX19_02331	0.21	+0.7
2,452,784	-		MPMX19_02331	0.21	-0.2
2,452,784	-		MPMX19_02331	0.21	+0.8
2,452,784	-		MPMX19_02331	0.21	-2.0
2,452,784	-		MPMX19_02331	0.21	-1.4
2,452,784	-		MPMX19_02331	0.21	-0.1
2,452,784	-		MPMX19_02331	0.21	-0.3
2,452,784	-		MPMX19_02331	0.21	-1.1
2,452,784	-		MPMX19_02331	0.21	-0.5
2,452,784	-		MPMX19_02331	0.21	-1.1
2,452,784	-		MPMX19_02331	0.21	-0.9
2,452,784	-		MPMX19_02331	0.21	+0.5
2,452,784	-		MPMX19_02331	0.21	+0.6
2,452,941	+		MPMX19_02331	0.32	-0.2
2,452,941	+		MPMX19_02331	0.32	+0.5
2,452,941	+		MPMX19_02331	0.32	-1.7
2,452,941	+		MPMX19_02331	0.32	+0.4
2,452,941	+		MPMX19_02331	0.32	+0.1
2,452,941	+		MPMX19_02331	0.32	+0.1
2,452,941	+		MPMX19_02331	0.32	-1.4
2,452,941	+		MPMX19_02331	0.32	-0.2
2,452,941	+		MPMX19_02331	0.32	-1.5
2,452,941	+		MPMX19_02331	0.32	-0.1
2,452,941	+		MPMX19_02331	0.32	-1.0
2,452,941	+		MPMX19_02331	0.32	-1.1
2,452,941	+		MPMX19_02331	0.32	-0.3
2,452,941	+		MPMX19_02331	0.32	-0.4
2,452,941	+		MPMX19_02331	0.32	+1.1
2,452,941	+		MPMX19_02331	0.32	-0.1
2,452,941	+		MPMX19_02331	0.32	+0.6
2,452,941	+		MPMX19_02331	0.32	-2.1
2,452,941	+		MPMX19_02331	0.32	-0.3
2,452,941	+		MPMX19_02331	0.32	-0.3
2,452,941	+		MPMX19_02331	0.32	-0.2
2,452,941	+		MPMX19_02331	0.32	-0.6
2,452,941	+		MPMX19_02331	0.32	+0.9
2,452,942	-		MPMX19_02331	0.32	-1.2
2,452,942	-		MPMX19_02331	0.32	-0.8
2,452,942	-		MPMX19_02331	0.32	-0.2
2,452,942	-		MPMX19_02331	0.32	+2.1
2,452,942	-		MPMX19_02331	0.32	+0.3
2,452,942	-		MPMX19_02331	0.32	-1.2
2,452,942	-		MPMX19_02331	0.32	+0.2
2,452,942	-		MPMX19_02331	0.32	-0.6
2,452,942	-		MPMX19_02331	0.32	-0.4
2,452,942	-		MPMX19_02331	0.32	+0.3
2,452,942	-		MPMX19_02331	0.32	+1.6
2,452,942	-		MPMX19_02331	0.32	+0.5
2,452,942	-		MPMX19_02331	0.32	+0.9
2,452,942	-		MPMX19_02331	0.32	-0.6
2,452,942	-		MPMX19_02331	0.32	-0.9
2,452,942	-		MPMX19_02331	0.32	-1.0
2,452,942	-		MPMX19_02331	0.32	+0.1
2,452,942	-		MPMX19_02331	0.32	+1.2
2,452,942	-		MPMX19_02331	0.32	-0.1
2,452,942	-		MPMX19_02331	0.32	+0.7
2,452,942	-		MPMX19_02331	0.32	-0.7
2,452,942	-		MPMX19_02331	0.32	-0.7
2,452,942	-		MPMX19_02331	0.32	-0.4
2,452,942	-		MPMX19_02331	0.32	-0.5
2,452,942	-		MPMX19_02331	0.32	-0.3
2,452,942	-		MPMX19_02331	0.32	-0.5
2,452,942	-		MPMX19_02331	0.32	+0.4
2,452,942	-		MPMX19_02331	0.32	-2.2
2,452,942	-		MPMX19_02331	0.32	-1.6
2,452,942	-		MPMX19_02331	0.32	-0.9
2,452,942	-		MPMX19_02331	0.32	+0.7
2,452,942	-		MPMX19_02331	0.32	-0.7
2,452,942	-		MPMX19_02331	0.32	+0.2
2,452,942	-		MPMX19_02331	0.32	-1.0
2,452,942	-		MPMX19_02331	0.32	-0.0
2,452,942	-		MPMX19_02331	0.32	+0.6
2,452,942	-		MPMX19_02331	0.32	+0.1
2,452,942	-		MPMX19_02331	0.32	-0.7
2,452,942	-		MPMX19_02331	0.32	+1.0
2,452,942	-		MPMX19_02331	0.32	-1.4
2,453,139	+		MPMX19_02331	0.45	-1.6
2,453,139	+		MPMX19_02331	0.45	-1.1
2,453,139	+		MPMX19_02331	0.45	-0.3
2,453,139	+		MPMX19_02331	0.45	-0.6
2,453,139	+		MPMX19_02331	0.45	-0.4
2,453,139	+		MPMX19_02331	0.45	+0.0
2,453,139	+		MPMX19_02331	0.45	-0.1
2,453,139	+		MPMX19_02331	0.45	-0.7
2,453,139	+		MPMX19_02331	0.45	+0.0
2,453,139	+		MPMX19_02331	0.45	-0.4
2,453,139	+		MPMX19_02331	0.45	-1.5
2,453,139	+		MPMX19_02331	0.45	-1.4
2,453,139	+		MPMX19_02331	0.45	-0.4
2,453,139	+		MPMX19_02331	0.45	-0.1
2,453,139	+		MPMX19_02331	0.45	+0.5
2,453,139	+		MPMX19_02331	0.45	-1.1
2,453,139	+		MPMX19_02331	0.45	+0.6
2,453,140	-		MPMX19_02331	0.45	-1.6
2,453,140	-		MPMX19_02331	0.45	-0.6
2,453,140	-		MPMX19_02331	0.45	+0.0
2,453,140	-		MPMX19_02331	0.45	-0.7
2,453,140	-		MPMX19_02331	0.45	-1.7
2,453,140	-		MPMX19_02331	0.45	+1.0
2,453,140	-		MPMX19_02331	0.45	-0.3
2,453,140	-		MPMX19_02331	0.45	+0.7
2,453,140	-		MPMX19_02331	0.45	-0.1
2,453,140	-		MPMX19_02331	0.45	+0.7
2,453,140	-		MPMX19_02331	0.45	-1.1
2,453,140	-		MPMX19_02331	0.45	-0.7
2,453,140	-		MPMX19_02331	0.45	+1.2
2,453,140	-		MPMX19_02331	0.45	-0.4
2,453,140	-		MPMX19_02331	0.45	+0.7
2,453,140	-		MPMX19_02331	0.45	-0.9
2,453,140	-		MPMX19_02331	0.45	+1.1
2,453,187	+		MPMX19_02331	0.49	-1.6
2,453,187	+		MPMX19_02331	0.49	-1.9
2,453,187	+		MPMX19_02331	0.49	-1.2
2,453,187	+		MPMX19_02331	0.49	-0.6
2,453,187	+		MPMX19_02331	0.49	-1.9
2,453,188	-		MPMX19_02331	0.49	-0.4
2,453,188	-		MPMX19_02331	0.49	+0.1
2,453,188	-		MPMX19_02331	0.49	-0.7
2,453,188	-		MPMX19_02331	0.49	-2.0
2,453,188	-		MPMX19_02331	0.49	-0.7
2,453,253	+		MPMX19_02331	0.53	-0.9
2,453,253	+		MPMX19_02331	0.53	-0.9
2,453,253	+		MPMX19_02331	0.53	+0.6
2,453,254	-		MPMX19_02331	0.53	+1.9
2,453,254	-		MPMX19_02331	0.53	-0.6