Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02303

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,425,062	+		MPMX19_02302	0.60	+1.0
2,425,062	+		MPMX19_02302	0.60	+0.3
2,425,062	+		MPMX19_02302	0.60	-0.8
2,425,062	+		MPMX19_02302	0.60	+0.1
2,425,063	-		MPMX19_02302	0.60	-0.2
2,425,063	-		MPMX19_02302	0.60	+0.6
2,425,063	-		MPMX19_02302	0.60	-1.4
2,425,063	-		MPMX19_02302	0.60	+1.6
2,425,063	-		MPMX19_02302	0.60	-1.4
2,425,063	-		MPMX19_02302	0.60	-0.8
2,425,063	-		MPMX19_02302	0.60	-1.7
2,425,077	+		MPMX19_02302	0.61	-0.2
2,425,077	+		MPMX19_02302	0.61	-2.3
2,425,077	+		MPMX19_02302	0.61	-1.3
2,425,077	+		MPMX19_02302	0.61	-0.9
2,425,077	+		MPMX19_02302	0.61	-1.1
2,425,077	+		MPMX19_02302	0.61	-0.3
2,425,077	+		MPMX19_02302	0.61	-0.6
2,425,077	+		MPMX19_02302	0.61	+1.0
2,425,077	+		MPMX19_02302	0.61	-1.7
2,425,077	+		MPMX19_02302	0.61	+0.0
2,425,077	+		MPMX19_02302	0.61	-0.9
2,425,077	+		MPMX19_02302	0.61	+1.4
2,425,078	-		MPMX19_02302	0.61	+0.1
2,425,078	-		MPMX19_02302	0.61	-1.7
2,425,078	-		MPMX19_02302	0.61	-2.5
2,425,078	-		MPMX19_02302	0.61	+0.7
2,425,078	-		MPMX19_02302	0.61	-0.5
2,425,078	-		MPMX19_02302	0.61	-0.3
2,425,078	-		MPMX19_02302	0.61	-1.1
2,425,078	-		MPMX19_02302	0.61	-0.3
2,425,078	-		MPMX19_02302	0.61	+0.7
2,425,078	-		MPMX19_02302	0.61	+1.1
2,425,078	-		MPMX19_02302	0.61	-1.3
2,425,078	-		MPMX19_02302	0.61	-0.3
2,425,078	-		MPMX19_02302	0.61	-0.8
2,425,078	-		MPMX19_02302	0.61	-0.4
2,425,078	-		MPMX19_02302	0.61	-0.9
2,425,078	-		MPMX19_02302	0.61	-0.7
2,425,078	-		MPMX19_02302	0.61	-0.1
2,425,078	-		MPMX19_02302	0.61	-0.4
2,425,078	-		MPMX19_02302	0.61	-0.9
2,425,078	-		MPMX19_02302	0.61	+0.3
2,425,104	+		MPMX19_02302	0.63	-0.5
2,425,104	+		MPMX19_02302	0.63	-0.9
2,425,104	+		MPMX19_02302	0.63	-1.4
2,425,104	+		MPMX19_02302	0.63	-0.1
2,425,104	+		MPMX19_02302	0.63	-0.3
2,425,104	+		MPMX19_02302	0.63	+0.7
2,425,104	+		MPMX19_02302	0.63	-1.6
2,425,104	+		MPMX19_02302	0.63	+0.9
2,425,104	+		MPMX19_02302	0.63	+0.4
2,425,104	+		MPMX19_02302	0.63	-1.6
2,425,104	+		MPMX19_02302	0.63	+0.2
2,425,104	+		MPMX19_02302	0.63	-0.9
2,425,104	+		MPMX19_02302	0.63	-1.0
2,425,104	+		MPMX19_02302	0.63	-0.7
2,425,104	+		MPMX19_02302	0.63	+0.3
2,425,104	+		MPMX19_02302	0.63	-0.4
2,425,104	+		MPMX19_02302	0.63	-0.6
2,425,104	+		MPMX19_02302	0.63	-0.6
2,425,104	+		MPMX19_02302	0.63	-1.4
2,425,104	+		MPMX19_02302	0.63	+0.3
2,425,104	+		MPMX19_02302	0.63	+0.5
2,425,104	+		MPMX19_02302	0.63	+0.4
2,425,104	+		MPMX19_02302	0.63	-0.4
2,425,104	+		MPMX19_02302	0.63	+0.0
2,425,104	+		MPMX19_02302	0.63	-0.3
2,425,104	+		MPMX19_02302	0.63	-1.2
2,425,104	+		MPMX19_02302	0.63	+2.5
2,425,104	+		MPMX19_02302	0.63	-1.1
2,425,104	+		MPMX19_02302	0.63	+0.1
2,425,105	-		MPMX19_02302	0.63	-0.9
2,425,105	-		MPMX19_02302	0.63	+0.1
2,425,105	-		MPMX19_02302	0.63	-0.5
2,425,105	-		MPMX19_02302	0.63	-0.9
2,425,105	-		MPMX19_02302	0.63	-0.9
2,425,105	-		MPMX19_02302	0.63	+0.1
2,425,105	-		MPMX19_02302	0.63	-0.4
2,425,105	-		MPMX19_02302	0.63	-1.8
2,425,105	-		MPMX19_02302	0.63	-1.6
2,425,105	-		MPMX19_02302	0.63	-0.4
2,425,105	-		MPMX19_02302	0.63	+0.4
2,425,105	-		MPMX19_02302	0.63	-0.0
2,425,105	-		MPMX19_02302	0.63	+1.3
2,425,105	-		MPMX19_02302	0.63	-1.1
2,425,105	-		MPMX19_02302	0.63	-0.6
2,425,105	-		MPMX19_02302	0.63	+1.9
2,425,105	-		MPMX19_02302	0.63	-0.1
2,425,105	-		MPMX19_02302	0.63	-0.8
2,425,105	-		MPMX19_02302	0.63	-0.8
2,425,105	-		MPMX19_02302	0.63	+0.6
2,425,105	-		MPMX19_02302	0.63	-0.6
2,425,105	-		MPMX19_02302	0.63	-0.3
2,425,188	+		MPMX19_02302	0.69	+0.3
2,425,188	+		MPMX19_02302	0.69	+0.6
2,425,188	+		MPMX19_02302	0.69	-0.6
2,425,188	+		MPMX19_02302	0.69	-1.4
2,425,188	+		MPMX19_02302	0.69	-0.9
2,425,188	+		MPMX19_02302	0.69	-0.4
2,425,188	+		MPMX19_02302	0.69	-1.4
2,425,188	+		MPMX19_02302	0.69	-0.1
2,425,188	+		MPMX19_02302	0.69	-1.6
2,425,188	+		MPMX19_02302	0.69	-0.4
2,425,188	+		MPMX19_02302	0.69	-2.1
2,425,188	+		MPMX19_02302	0.69	-1.1
2,425,188	+		MPMX19_02302	0.69	-0.3
2,425,188	+		MPMX19_02302	0.69	+1.5
2,425,188	+		MPMX19_02302	0.69	+0.3
2,425,188	+		MPMX19_02302	0.69	-0.9
2,425,188	+		MPMX19_02302	0.69	-0.4
2,425,188	+		MPMX19_02302	0.69	+1.9
2,425,188	+		MPMX19_02302	0.69	-0.4
2,425,188	+		MPMX19_02302	0.69	+0.3
2,425,188	+		MPMX19_02302	0.69	-1.6
2,425,188	+		MPMX19_02302	0.69	+0.1
2,425,188	+		MPMX19_02302	0.69	-0.9
2,425,188	+		MPMX19_02302	0.69	+0.1
2,425,189	-		MPMX19_02302	0.69	+0.6
2,425,189	-		MPMX19_02302	0.69	-3.4
2,425,189	-		MPMX19_02302	0.69	-0.6
2,425,189	-		MPMX19_02302	0.69	+0.1
2,425,189	-		MPMX19_02302	0.69	+1.3
2,425,189	-		MPMX19_02302	0.69	-0.0
2,425,189	-		MPMX19_02302	0.69	-1.6
2,425,189	-		MPMX19_02302	0.69	-0.9
2,425,189	-		MPMX19_02302	0.69	-1.1
2,425,189	-		MPMX19_02302	0.69	+0.6
2,425,189	-		MPMX19_02302	0.69	+0.5
2,425,189	-		MPMX19_02302	0.69	-1.5
2,425,189	-		MPMX19_02302	0.69	+0.7
2,425,189	-		MPMX19_02302	0.69	-1.7
2,425,189	-		MPMX19_02302	0.69	-0.7
2,425,189	-		MPMX19_02302	0.69	+1.5
2,425,189	-		MPMX19_02302	0.69	+0.3
2,425,189	-		MPMX19_02302	0.69	-0.3
2,425,189	-		MPMX19_02302	0.69	+0.1
2,425,189	-		MPMX19_02302	0.69	+1.5
2,425,189	-		MPMX19_02302	0.69	-0.4
2,425,189	-		MPMX19_02302	0.69	+0.9
2,425,189	-		MPMX19_02302	0.69	+0.4
2,425,189	-		MPMX19_02302	0.69	-1.6
2,425,189	-		MPMX19_02302	0.69	-1.3
2,425,189	-		MPMX19_02302	0.69	-1.0
2,425,272	+		MPMX19_02302	0.75	-0.0
2,425,272	+		MPMX19_02302	0.75	-2.0
2,425,272	+		MPMX19_02302	0.75	+0.6
2,425,272	+		MPMX19_02302	0.75	-2.0
2,425,272	+		MPMX19_02302	0.75	-0.8
2,425,272	+		MPMX19_02302	0.75	-2.2
2,425,272	+		MPMX19_02302	0.75	+0.3
2,425,272	+		MPMX19_02302	0.75	-0.5
2,425,272	+		MPMX19_02302	0.75	+1.5
2,425,272	+		MPMX19_02302	0.75	+1.1
2,425,272	+		MPMX19_02302	0.75	+2.4
2,425,272	+		MPMX19_02302	0.75	-0.7
2,425,272	+		MPMX19_02302	0.75	-0.8
2,425,272	+		MPMX19_02302	0.75	-0.1
2,425,272	+		MPMX19_02302	0.75	-1.1
2,425,272	+		MPMX19_02302	0.75	-1.1
2,425,272	+		MPMX19_02302	0.75	-0.3
2,425,272	+		MPMX19_02302	0.75	+0.7
2,425,272	+		MPMX19_02302	0.75	-1.4
2,425,272	+		MPMX19_02302	0.75	-0.1
2,425,272	+		MPMX19_02302	0.75	-0.4
2,425,272	+		MPMX19_02302	0.75	-0.3
2,425,272	+		MPMX19_02302	0.75	-0.8
2,425,272	+		MPMX19_02302	0.75	+0.1
2,425,272	+		MPMX19_02302	0.75	-0.5
2,425,272	+		MPMX19_02302	0.75	-1.4
2,425,272	+		MPMX19_02302	0.75	+1.1
2,425,272	+		MPMX19_02302	0.75	-0.6
2,425,273	-		MPMX19_02302	0.76	-0.8
2,425,273	-		MPMX19_02302	0.76	+0.0
2,425,273	-		MPMX19_02302	0.76	-1.3
2,425,273	-		MPMX19_02302	0.76	+0.7
2,425,273	-		MPMX19_02302	0.76	-0.1
2,425,273	-		MPMX19_02302	0.76	+0.5
2,425,273	-		MPMX19_02302	0.76	+0.0
2,425,273	-		MPMX19_02302	0.76	-0.8
2,425,273	-		MPMX19_02302	0.76	-0.4
2,425,273	-		MPMX19_02302	0.76	-1.0
2,425,273	-		MPMX19_02302	0.76	+1.0
2,425,273	-		MPMX19_02302	0.76	-0.9
2,425,273	-		MPMX19_02302	0.76	+0.0
2,425,273	-		MPMX19_02302	0.76	-1.4
2,425,273	-		MPMX19_02302	0.76	+0.3
2,425,273	-		MPMX19_02302	0.76	+0.0
2,425,273	-		MPMX19_02302	0.76	+0.1
2,425,273	-		MPMX19_02302	0.76	+0.1
2,425,273	-		MPMX19_02302	0.76	-1.1
2,425,273	-		MPMX19_02302	0.76	-1.3
2,425,273	-		MPMX19_02302	0.76	+0.2
2,425,273	-		MPMX19_02302	0.76	-1.4
2,425,273	-		MPMX19_02302	0.76	+0.6
2,425,273	-		MPMX19_02302	0.76	-0.3
2,425,320	+		MPMX19_02302	0.79	+0.1
2,425,320	+		MPMX19_02302	0.79	+1.1
2,425,320	+		MPMX19_02302	0.79	+0.6
2,425,320	+		MPMX19_02302	0.79	+1.3
2,425,321	-		MPMX19_02302	0.79	+0.3
2,425,321	-		MPMX19_02302	0.79	-0.5
2,425,321	-		MPMX19_02302	0.79	+0.7
2,425,321	-		MPMX19_02302	0.79	-0.2
2,425,321	-		MPMX19_02302	0.79	+1.1
2,425,321	-		MPMX19_02302	0.79	+0.4
2,425,321	-		MPMX19_02302	0.79	+0.7
2,425,413	+		MPMX19_02302	0.86	-0.1
2,425,413	+		MPMX19_02302	0.86	+0.3
2,425,413	+		MPMX19_02302	0.86	+0.3
2,425,413	+		MPMX19_02302	0.86	-1.9
2,425,413	+		MPMX19_02302	0.86	-0.9
2,425,413	+		MPMX19_02302	0.86	+0.0
2,425,413	+		MPMX19_02302	0.86	-1.7
2,425,413	+		MPMX19_02302	0.86	+0.9
2,425,414	-		MPMX19_02302	0.86	+0.5
2,425,414	-		MPMX19_02302	0.86	+1.3
2,425,414	-		MPMX19_02302	0.86	+0.7
2,425,414	-		MPMX19_02302	0.86	+0.0
2,425,414	-		MPMX19_02302	0.86	-1.1
2,425,414	-		MPMX19_02302	0.86	-1.3
2,425,414	-		MPMX19_02302	0.86	+0.3
2,425,414	-		MPMX19_02302	0.86	-0.5
2,425,414	-		MPMX19_02302	0.86	-0.8
2,425,451	+		MPMX19_02302	0.89	-0.3
2,425,451	+		MPMX19_02302	0.89	+1.3
2,425,452	-		MPMX19_02302	0.89	+0.9
2,425,452	-		MPMX19_02302	0.89	+0.1
2,425,452	-		MPMX19_02302	0.89	-0.3
2,425,452	-		MPMX19_02302	0.89	-0.4
2,425,452	-		MPMX19_02302	0.89	+0.6
2,425,452	-		MPMX19_02302	0.89	-1.0
2,425,452	-		MPMX19_02302	0.89	-0.5
2,425,452	-		MPMX19_02302	0.89	+1.9
2,425,452	-		MPMX19_02302	0.89	+0.9
2,425,452	-		MPMX19_02302	0.89	+1.2
2,425,452	-		MPMX19_02302	0.89	+0.1
2,425,500	+				-0.4
2,425,500	+				-0.2
2,425,500	+				+0.9
2,425,500	+				-1.6
2,425,500	+				-2.1
2,425,500	+				+0.3
2,425,500	+				-0.9
2,425,501	-				-0.4
2,425,501	-				-0.1
2,425,501	-				-1.4
2,425,501	-				-0.7
2,425,501	-				-1.2
2,425,593	+				+0.2
2,425,593	+				-2.1
2,425,593	+				+0.3
2,425,593	+				-0.7
2,425,593	+				+0.2
2,425,594	-				-0.7
2,425,594	-				+0.1
2,425,594	-				-0.6
2,425,594	-				-0.9
2,425,594	-				-0.1
2,425,594	-				-1.1
2,425,594	-				-0.1
2,425,594	-				+0.2
2,425,594	-				-0.2
2,425,594	-				-0.3
2,425,672	+				-1.2
2,425,672	+				-0.2
2,425,672	+				-0.3
2,425,672	+				-0.2
2,425,672	+				-1.4
2,425,673	-				+0.9
2,425,673	-				+0.1
2,425,673	-				-0.3
2,425,673	-				-0.7
2,425,746	-		MPMX19_02303	0.21	-1.1
2,425,746	-		MPMX19_02303	0.21	+0.9
2,425,831	+		MPMX19_02303	0.36	-1.3
2,425,832	-		MPMX19_02303	0.36	+0.1
2,425,832	-		MPMX19_02303	0.36	-0.9
2,425,873	+		MPMX19_02303	0.44	+1.3
2,425,873	+		MPMX19_02303	0.44	-1.1
2,425,873	+		MPMX19_02303	0.44	-1.1
2,425,874	-		MPMX19_02303	0.44	-0.7
2,425,874	-		MPMX19_02303	0.44	-0.4
2,425,942	-		MPMX19_02303	0.56	-1.6
2,426,235	+				+0.3
2,426,252	+				-0.1
2,426,252	+				-1.1