Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02248

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,363,925	+				+1.9
2,363,926	-				-2.3
2,363,926	-				-1.9
2,363,926	-				-1.1
2,363,926	-				+0.1
2,363,926	-				-1.9
2,363,926	-				-1.2
2,364,010	+				-1.1
2,364,010	+				+0.3
2,364,010	+				-1.6
2,364,010	+				-0.2
2,364,010	+				-1.4
2,364,010	+				-0.9
2,364,010	+				+0.7
2,364,010	+				+0.3
2,364,010	+				+0.7
2,364,010	+				-0.3
2,364,010	+				-1.9
2,364,010	+				-1.1
2,364,010	+				-0.2
2,364,010	+				+0.0
2,364,010	+				+0.4
2,364,010	+				+0.3
2,364,010	+				+0.9
2,364,010	+				-1.1
2,364,010	+				-1.8
2,364,010	+				+0.2
2,364,010	+				-1.2
2,364,010	+				+0.5
2,364,010	+				-0.5
2,364,010	+				-1.5
2,364,010	+				+1.3
2,364,010	+				-1.0
2,364,010	+				-0.1
2,364,010	+				+0.7
2,364,010	+				+1.2
2,364,010	+				+0.5
2,364,010	+				-0.9
2,364,010	+				-2.0
2,364,010	+				+0.3
2,364,010	+				-0.1
2,364,010	+				+0.1
2,364,010	+				-2.1
2,364,010	+				-1.5
2,364,010	+				+0.9
2,364,010	+				-0.0
2,364,011	-				+0.1
2,364,011	-				-0.8
2,364,011	-				-2.0
2,364,011	-				-1.7
2,364,011	-				-0.2
2,364,011	-				-0.5
2,364,011	-				+0.9
2,364,011	-				+0.5
2,364,011	-				-0.5
2,364,011	-				+0.2
2,364,011	-				-0.1
2,364,011	-				-0.6
2,364,011	-				-0.3
2,364,011	-				-1.6
2,364,011	-				-1.2
2,364,011	-				-0.5
2,364,011	-				+1.0
2,364,011	-				+0.9
2,364,011	-				-1.5
2,364,011	-				-0.9
2,364,011	-				-0.0
2,364,011	-				+1.1
2,364,011	-				+0.1
2,364,011	-				+1.5
2,364,011	-				-0.8
2,364,011	-				-1.1
2,364,011	-				-0.5
2,364,011	-				+0.8
2,364,011	-				-1.5
2,364,011	-				-0.3
2,364,011	-				-0.8
2,364,011	-				+0.5
2,364,011	-				-0.3
2,364,011	-				-1.3
2,364,011	-				-0.3
2,364,011	-				-0.2
2,364,011	-				+1.0
2,364,011	-				+0.0
2,364,087	+				-0.1
2,364,087	+				+0.7
2,364,282	-		MPMX19_02247	0.36	-0.9
2,364,296	-		MPMX19_02247	0.38	+1.1
2,364,311	+		MPMX19_02247	0.40	-0.7
2,364,311	+		MPMX19_02247	0.40	-1.3
2,364,311	+		MPMX19_02247	0.40	-0.0
2,364,311	+		MPMX19_02247	0.40	-0.7
2,364,311	+		MPMX19_02247	0.40	+1.3
2,364,311	+		MPMX19_02247	0.40	-0.9
2,364,311	+		MPMX19_02247	0.40	-0.2
2,364,311	+		MPMX19_02247	0.40	+0.5
2,364,311	+		MPMX19_02247	0.40	-0.4
2,364,311	+		MPMX19_02247	0.40	-0.4
2,364,311	+		MPMX19_02247	0.40	-0.4
2,364,311	+		MPMX19_02247	0.40	+1.9
2,364,311	+		MPMX19_02247	0.40	-1.3
2,364,311	+		MPMX19_02247	0.40	-0.5
2,364,311	+		MPMX19_02247	0.40	-1.4
2,364,311	+		MPMX19_02247	0.40	+1.4
2,364,311	+		MPMX19_02247	0.40	-2.4
2,364,311	+		MPMX19_02247	0.40	+0.3
2,364,311	+		MPMX19_02247	0.40	+0.5
2,364,311	+		MPMX19_02247	0.40	+0.4
2,364,311	+		MPMX19_02247	0.40	-0.0
2,364,311	+		MPMX19_02247	0.40	-1.6
2,364,311	+		MPMX19_02247	0.40	-1.7
2,364,311	+		MPMX19_02247	0.40	+0.6
2,364,311	+		MPMX19_02247	0.40	-1.2
2,364,311	+		MPMX19_02247	0.40	+2.2
2,364,311	+		MPMX19_02247	0.40	-2.0
2,364,311	+		MPMX19_02247	0.40	+0.3
2,364,311	+		MPMX19_02247	0.40	+1.1
2,364,311	+		MPMX19_02247	0.40	-1.3
2,364,311	+		MPMX19_02247	0.40	-1.1
2,364,312	-		MPMX19_02247	0.40	+1.2
2,364,312	-		MPMX19_02247	0.40	-0.3
2,364,312	-		MPMX19_02247	0.40	+0.2
2,364,312	-		MPMX19_02247	0.40	+0.4
2,364,312	-		MPMX19_02247	0.40	+0.0
2,364,312	-		MPMX19_02247	0.40	+0.1
2,364,312	-		MPMX19_02247	0.40	+0.1
2,364,312	-		MPMX19_02247	0.40	-0.2
2,364,312	-		MPMX19_02247	0.40	-0.1
2,364,312	-		MPMX19_02247	0.40	+0.3
2,364,312	-		MPMX19_02247	0.40	+0.9
2,364,312	-		MPMX19_02247	0.40	+0.6
2,364,312	-		MPMX19_02247	0.40	-0.9
2,364,312	-		MPMX19_02247	0.40	-1.6
2,364,312	-		MPMX19_02247	0.40	-1.3
2,364,312	-		MPMX19_02247	0.40	-0.1
2,364,312	-		MPMX19_02247	0.40	+1.0
2,364,312	-		MPMX19_02247	0.40	+0.5
2,364,312	-		MPMX19_02247	0.40	-1.6
2,364,312	-		MPMX19_02247	0.40	-1.1
2,364,312	-		MPMX19_02247	0.40	-0.3
2,364,312	-		MPMX19_02247	0.40	-0.1
2,364,312	-		MPMX19_02247	0.40	-0.0
2,364,312	-		MPMX19_02247	0.40	+0.9
2,364,312	-		MPMX19_02247	0.40	+0.5
2,364,343	+		MPMX19_02247	0.45	-1.2
2,364,343	+		MPMX19_02247	0.45	-1.8
2,364,344	-		MPMX19_02247	0.45	-0.5
2,364,365	+		MPMX19_02247	0.49	-0.4
2,364,365	+		MPMX19_02247	0.49	-0.6
2,364,366	-		MPMX19_02247	0.49	+0.7
2,364,366	-		MPMX19_02247	0.49	-0.9
2,364,366	-		MPMX19_02247	0.49	-0.0
2,364,366	-		MPMX19_02247	0.49	-0.7
2,364,366	-		MPMX19_02247	0.49	+2.3
2,364,366	-		MPMX19_02247	0.49	-0.0
2,364,366	-		MPMX19_02247	0.49	-0.1
2,364,366	-		MPMX19_02247	0.49	+0.4
2,364,482	+		MPMX19_02247	0.67	+0.1
2,364,482	+		MPMX19_02247	0.67	-0.2
2,364,482	+		MPMX19_02247	0.67	-0.7
2,364,482	+		MPMX19_02247	0.67	-0.8
2,364,482	+		MPMX19_02247	0.67	-0.4
2,364,482	+		MPMX19_02247	0.67	-0.3
2,364,482	+		MPMX19_02247	0.67	+1.0
2,364,483	-		MPMX19_02247	0.67	-1.0
2,364,483	-		MPMX19_02247	0.67	-0.4
2,364,483	-		MPMX19_02247	0.67	+0.7
2,364,483	-		MPMX19_02247	0.67	-0.0
2,364,483	-		MPMX19_02247	0.67	+0.3
2,364,483	-		MPMX19_02247	0.67	-0.5
2,364,483	-		MPMX19_02247	0.67	-0.7
2,364,483	-		MPMX19_02247	0.67	+0.7
2,364,533	+		MPMX19_02247	0.75	+1.0
2,364,533	+		MPMX19_02247	0.75	-2.0
2,364,533	+		MPMX19_02247	0.75	+0.4
2,364,533	+		MPMX19_02247	0.75	-1.0
2,364,533	+		MPMX19_02247	0.75	+0.4
2,364,533	+		MPMX19_02247	0.75	+0.1
2,364,533	+		MPMX19_02247	0.75	+0.3
2,364,534	-		MPMX19_02247	0.75	+0.1
2,364,534	-		MPMX19_02247	0.75	-0.9
2,364,560	+		MPMX19_02247	0.79	-1.2
2,364,561	-		MPMX19_02247	0.79	-1.6
2,364,568	+		MPMX19_02247	0.80	-0.9
2,364,568	+		MPMX19_02247	0.80	-0.9
2,364,568	+		MPMX19_02247	0.80	-1.9
2,364,568	+		MPMX19_02247	0.80	-1.3
2,364,568	+		MPMX19_02247	0.80	-1.2
2,364,568	+		MPMX19_02247	0.80	-0.7
2,364,568	+		MPMX19_02247	0.80	+0.4
2,364,569	-		MPMX19_02247	0.80	-0.1
2,364,569	-		MPMX19_02247	0.80	+0.2
2,364,569	-		MPMX19_02247	0.80	-0.3
2,364,569	-		MPMX19_02247	0.80	+0.3
2,364,602	+		MPMX19_02247	0.86	-0.0
2,364,602	+		MPMX19_02247	0.86	-1.0
2,364,602	+		MPMX19_02247	0.86	-2.0
2,364,602	+		MPMX19_02247	0.86	-1.4
2,364,602	+		MPMX19_02247	0.86	-0.1
2,364,602	+		MPMX19_02247	0.86	-1.2
2,364,602	+		MPMX19_02247	0.86	-1.5
2,364,602	+		MPMX19_02247	0.86	-1.1
2,364,603	-		MPMX19_02247	0.86	-0.1
2,364,603	-		MPMX19_02247	0.86	-0.5
2,364,603	-		MPMX19_02247	0.86	-1.3
2,364,603	-		MPMX19_02247	0.86	-0.6
2,364,603	-		MPMX19_02247	0.86	-1.7
2,364,603	-		MPMX19_02247	0.86	+0.5
2,364,603	-		MPMX19_02247	0.86	-0.9
2,364,603	-		MPMX19_02247	0.86	-0.1
2,364,603	-		MPMX19_02247	0.86	-1.1
2,364,603	-		MPMX19_02247	0.86	+0.1
2,364,603	-		MPMX19_02247	0.86	+0.3
2,364,603	-		MPMX19_02247	0.86	+0.1
2,364,618	-		MPMX19_02247	0.88	+1.2
2,364,629	+		MPMX19_02247	0.90	-2.4
2,364,629	+		MPMX19_02247	0.90	-0.7
2,364,629	+		MPMX19_02247	0.90	-2.3
2,364,629	+		MPMX19_02247	0.90	-0.6
2,364,629	+		MPMX19_02247	0.90	+0.3
2,364,629	+		MPMX19_02247	0.90	-1.4
2,364,629	+		MPMX19_02247	0.90	+0.0
2,364,629	+		MPMX19_02247	0.90	-0.3
2,364,629	+		MPMX19_02247	0.90	-1.7
2,364,629	+		MPMX19_02247	0.90	-0.4
2,364,629	+		MPMX19_02247	0.90	-0.8
2,364,629	+		MPMX19_02247	0.90	-0.4
2,364,629	+		MPMX19_02247	0.90	-0.6
2,364,629	+		MPMX19_02247	0.90	-0.9
2,364,629	+		MPMX19_02247	0.90	-2.1
2,364,630	-				-0.0
2,364,630	-				-1.1
2,364,630	-				+0.5
2,364,630	-				-0.1
2,364,630	-				+0.9
2,364,630	-				-2.0
2,364,630	-				+1.2
2,364,630	-				-0.2
2,364,630	-				-1.8
2,364,630	-				-1.0
2,364,630	-				-3.2
2,364,630	-				-1.8
2,364,653	+				-0.2
2,364,653	+				+0.9
2,364,653	+				+0.7
2,364,706	+				+0.1
2,364,706	+				-1.3
2,364,706	+				-1.4
2,364,706	+				-0.9
2,364,706	+				+0.9
2,364,706	+				-0.3
2,364,738	+				-0.7
2,364,738	+				-0.6
2,364,738	+				+0.6
2,364,738	+				+0.7
2,364,738	+				-0.8
2,364,739	-				+0.6
2,364,739	-				+0.1
2,364,739	-				-0.3
2,364,739	-				-0.1
2,364,739	-				+0.3
2,364,739	-				+0.6
2,364,739	-				+0.9
2,364,739	-				+0.2
2,364,739	-				+0.2
2,364,739	-				+0.3
2,364,774	+				+0.5
2,364,881	+				-1.5
2,364,881	+				-0.9
2,364,882	-				-0.7
2,364,882	-				-1.1
2,365,031	+		MPMX19_02248	0.34	-1.4
2,365,031	+		MPMX19_02248	0.34	-1.1
2,365,031	+		MPMX19_02248	0.34	-1.8
2,365,031	+		MPMX19_02248	0.34	-0.5
2,365,031	+		MPMX19_02248	0.34	+0.3
2,365,031	+		MPMX19_02248	0.34	-1.7
2,365,031	+		MPMX19_02248	0.34	-0.9
2,365,037	+		MPMX19_02248	0.35	-0.7
2,365,037	+		MPMX19_02248	0.35	-0.0
2,365,037	+		MPMX19_02248	0.35	-0.2
2,365,037	+		MPMX19_02248	0.35	+0.5
2,365,037	+		MPMX19_02248	0.35	+0.5
2,365,037	+		MPMX19_02248	0.35	-0.7
2,365,038	-		MPMX19_02248	0.35	+0.3
2,365,038	-		MPMX19_02248	0.35	+1.6
2,365,038	-		MPMX19_02248	0.35	-1.6
2,365,040	+		MPMX19_02248	0.35	-0.5
2,365,040	+		MPMX19_02248	0.35	-0.1
2,365,040	+		MPMX19_02248	0.35	-1.7
2,365,040	+		MPMX19_02248	0.35	+0.5
2,365,277	+		MPMX19_02248	0.79	+0.9
2,365,401	+				-0.8
2,365,401	+				-1.0
2,365,401	+				+0.1
2,365,401	+				-0.9
2,365,401	+				+0.0
2,365,402	-				+1.6
2,365,576	+				+1.9
2,365,576	+				-0.5
2,365,651	+		MPMX19_02249	0.14	-0.4
2,365,651	+		MPMX19_02249	0.14	-0.5
2,365,651	+		MPMX19_02249	0.14	-0.8
2,365,651	+		MPMX19_02249	0.14	+0.9
2,365,651	+		MPMX19_02249	0.14	-1.1
2,365,651	+		MPMX19_02249	0.14	-0.5
2,365,652	-		MPMX19_02249	0.14	-0.8
2,365,652	-		MPMX19_02249	0.14	-1.5
2,365,652	-		MPMX19_02249	0.14	+0.1
2,365,652	-		MPMX19_02249	0.14	-1.8
2,365,652	-		MPMX19_02249	0.14	-0.5
2,365,798	+		MPMX19_02249	0.21	+0.3
2,365,798	+		MPMX19_02249	0.21	-0.9
2,365,798	+		MPMX19_02249	0.21	-0.2
2,365,798	+		MPMX19_02249	0.21	-1.8
2,365,799	-		MPMX19_02249	0.21	-0.6
2,365,799	-		MPMX19_02249	0.21	-0.1
2,365,799	-		MPMX19_02249	0.21	+1.5
2,365,810	+		MPMX19_02249	0.22	-0.3
2,365,810	+		MPMX19_02249	0.22	+0.6
2,365,810	+		MPMX19_02249	0.22	+1.6
2,365,810	+		MPMX19_02249	0.22	-0.6
2,365,810	+		MPMX19_02249	0.22	-0.4
2,365,810	+		MPMX19_02249	0.22	-0.9
2,365,810	+		MPMX19_02249	0.22	+0.3
2,365,810	+		MPMX19_02249	0.22	-0.9
2,365,810	+		MPMX19_02249	0.22	-1.3
2,365,810	+		MPMX19_02249	0.22	-0.4
2,365,810	+		MPMX19_02249	0.22	-0.8
2,365,810	+		MPMX19_02249	0.22	-0.1
2,365,810	+		MPMX19_02249	0.22	+0.2
2,365,810	+		MPMX19_02249	0.22	-0.0
2,365,810	+		MPMX19_02249	0.22	+0.7
2,365,810	+		MPMX19_02249	0.22	+1.2
2,365,810	+		MPMX19_02249	0.22	+0.3
2,365,810	+		MPMX19_02249	0.22	-1.4
2,365,810	+		MPMX19_02249	0.22	+0.3
2,365,810	+		MPMX19_02249	0.22	-0.9
2,365,810	+		MPMX19_02249	0.22	-0.0
2,365,810	+		MPMX19_02249	0.22	-0.2
2,365,810	+		MPMX19_02249	0.22	-0.0
2,365,810	+		MPMX19_02249	0.22	-0.4
2,365,811	-		MPMX19_02249	0.22	-0.7
2,365,811	-		MPMX19_02249	0.22	+0.2
2,365,811	-		MPMX19_02249	0.22	+0.3
2,365,811	-		MPMX19_02249	0.22	-0.9
2,365,811	-		MPMX19_02249	0.22	-0.9
2,365,811	-		MPMX19_02249	0.22	+0.9
2,365,811	-		MPMX19_02249	0.22	+0.4
2,365,811	-		MPMX19_02249	0.22	+0.9
2,365,811	-		MPMX19_02249	0.22	-0.1
2,365,811	-		MPMX19_02249	0.22	-0.4
2,365,811	-		MPMX19_02249	0.22	-1.4
2,365,811	-		MPMX19_02249	0.22	-0.4
2,365,811	-		MPMX19_02249	0.22	-1.6
2,365,811	-		MPMX19_02249	0.22	+1.5
2,365,811	-		MPMX19_02249	0.22	+0.3
2,365,811	-		MPMX19_02249	0.22	+0.1
2,365,811	-		MPMX19_02249	0.22	-0.2
2,365,811	-		MPMX19_02249	0.22	-1.7
2,365,811	-		MPMX19_02249	0.22	-0.0
2,365,811	-		MPMX19_02249	0.22	+0.9
2,365,979	-		MPMX19_02249	0.30	+0.5
2,365,979	-		MPMX19_02249	0.30	-0.1
2,365,979	-		MPMX19_02249	0.30	+1.1
2,366,137	+		MPMX19_02249	0.39	-1.4
2,366,137	+		MPMX19_02249	0.39	+0.4
2,366,137	+		MPMX19_02249	0.39	+0.5
2,366,137	+		MPMX19_02249	0.39	+0.9
2,366,137	+		MPMX19_02249	0.39	+0.7
2,366,137	+		MPMX19_02249	0.39	-1.8
2,366,137	+		MPMX19_02249	0.39	+0.1
2,366,137	+		MPMX19_02249	0.39	-1.9
2,366,138	-		MPMX19_02249	0.39	-0.0
2,366,138	-		MPMX19_02249	0.39	-0.4
2,366,138	-		MPMX19_02249	0.39	+0.3
2,366,138	-		MPMX19_02249	0.39	-0.1
2,366,138	-		MPMX19_02249	0.39	+0.9
2,366,392	+		MPMX19_02249	0.52	-0.2
2,366,392	+		MPMX19_02249	0.52	+0.9
2,366,392	+		MPMX19_02249	0.52	+0.6
2,366,392	+		MPMX19_02249	0.52	-1.2
2,366,392	+		MPMX19_02249	0.52	+0.3
2,366,392	+		MPMX19_02249	0.52	-1.4