Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02214

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,317,931	+		MPMX19_02213	0.45	+0.7
2,317,931	+		MPMX19_02213	0.45	-0.1
2,317,931	+		MPMX19_02213	0.45	-1.5
2,317,931	+		MPMX19_02213	0.45	-0.7
2,317,931	+		MPMX19_02213	0.45	+1.0
2,317,931	+		MPMX19_02213	0.45	-0.8
2,317,931	+		MPMX19_02213	0.45	+0.6
2,317,931	+		MPMX19_02213	0.45	+0.1
2,317,931	+		MPMX19_02213	0.45	-1.3
2,317,932	-		MPMX19_02213	0.45	+0.7
2,317,932	-		MPMX19_02213	0.45	-0.1
2,317,932	-		MPMX19_02213	0.45	+1.1
2,317,932	-		MPMX19_02213	0.45	+0.7
2,317,932	-		MPMX19_02213	0.45	+0.2
2,317,932	-		MPMX19_02213	0.45	-0.0
2,317,932	-		MPMX19_02213	0.45	-0.4
2,317,932	-		MPMX19_02213	0.45	-0.6
2,317,932	-		MPMX19_02213	0.45	-0.8
2,318,030	+		MPMX19_02213	0.53	-0.1
2,318,030	+		MPMX19_02213	0.53	-0.5
2,318,030	+		MPMX19_02213	0.53	+1.3
2,318,030	+		MPMX19_02213	0.53	+0.8
2,318,031	-		MPMX19_02213	0.53	+0.7
2,318,031	-		MPMX19_02213	0.53	-0.7
2,318,031	-		MPMX19_02213	0.53	-0.0
2,318,031	-		MPMX19_02213	0.53	+0.2
2,318,031	-		MPMX19_02213	0.53	+0.3
2,318,031	-		MPMX19_02213	0.53	-0.5
2,318,031	-		MPMX19_02213	0.53	+0.7
2,318,031	-		MPMX19_02213	0.53	+0.6
2,318,031	-		MPMX19_02213	0.53	+0.1
2,318,031	-		MPMX19_02213	0.53	-0.4
2,318,031	-		MPMX19_02213	0.53	-0.7
2,318,031	-		MPMX19_02213	0.53	+0.1
2,318,031	-		MPMX19_02213	0.53	-0.3
2,318,147	+		MPMX19_02213	0.63	+0.1
2,318,147	+		MPMX19_02213	0.63	+1.1
2,318,147	+		MPMX19_02213	0.63	+0.0
2,318,147	+		MPMX19_02213	0.63	+0.1
2,318,147	+		MPMX19_02213	0.63	+1.1
2,318,147	+		MPMX19_02213	0.63	-2.0
2,318,147	+		MPMX19_02213	0.63	-0.1
2,318,147	+		MPMX19_02213	0.63	+0.6
2,318,147	+		MPMX19_02213	0.63	-1.3
2,318,148	-		MPMX19_02213	0.63	-0.3
2,318,148	-		MPMX19_02213	0.63	-0.7
2,318,148	-		MPMX19_02213	0.63	-0.6
2,318,148	-		MPMX19_02213	0.63	+0.1
2,318,490	-				+1.3
2,318,490	-				-0.0
2,318,490	-				-0.1
2,318,490	-				-0.7
2,318,537	+				-0.5
2,318,537	+				-0.3
2,318,538	-				+0.7
2,318,538	-				+0.5
2,318,538	-				-0.7
2,318,538	-				-1.1
2,318,538	-				-0.8
2,318,547	+				-0.3
2,318,547	+				-0.3
2,318,547	+				-0.5
2,318,547	+				-1.1
2,318,547	+				+0.5
2,318,547	+				-1.7
2,318,547	+				-0.7
2,318,547	+				+0.2
2,318,548	-				+0.1
2,318,548	-				-0.4
2,318,548	-				-0.1
2,318,548	-				-0.5
2,318,548	-				-0.5
2,318,548	-				-0.1
2,318,548	-				-0.0
2,318,635	+				-1.8
2,318,635	+				-0.8
2,318,635	+				-0.8
2,318,636	-				+0.9
2,318,636	-				-0.4
2,318,636	-				-0.5
2,318,636	-				+0.1
2,318,653	+				+1.1
2,318,653	+				-0.9
2,318,653	+				-0.3
2,318,653	+				-0.5
2,318,654	-				+1.6
2,318,659	+				-1.1
2,318,710	-				-0.5
2,318,745	+				+0.3
2,318,745	+				+0.3
2,318,745	+				-0.8
2,318,745	+				-0.1
2,318,746	-				-0.8
2,318,746	-				-0.3
2,318,746	-				-2.1
2,318,746	-				-2.3
2,318,755	+				-1.3
2,318,755	+				-1.4
2,318,756	-				-1.6
2,318,756	-				-0.8
2,318,758	+				-1.2
2,318,758	+				+1.3
2,318,758	+				+0.5
2,318,758	+				-0.3
2,318,759	-				+0.6
2,318,759	-				+0.2
2,318,773	+				+0.4
2,318,779	+				-1.1
2,318,780	-				+0.5
2,318,780	-				-0.5
2,318,780	-				-1.6
2,318,780	-				-1.7
2,318,780	-				+0.1
2,318,857	+				+0.9
2,318,857	+				-0.6
2,318,857	+				-0.0
2,318,857	+				+0.7
2,318,858	-				-0.7
2,318,858	-				-0.9
2,318,896	+				-0.3
2,318,897	-				-2.1
2,319,129	+				+0.0
2,319,129	+				-0.2
2,319,129	+				-0.7
2,319,129	+				-0.1
2,319,129	+				-0.6
2,319,129	+				+0.3
2,319,130	-				-1.4
2,319,130	-				-0.2
2,319,130	-				+0.1
2,319,130	-				-1.4
2,319,144	+				+0.3
2,319,396	+		MPMX19_02215	0.16	-1.1
2,319,396	+		MPMX19_02215	0.16	+1.3
2,319,396	+		MPMX19_02215	0.16	-0.5
2,319,396	+		MPMX19_02215	0.16	-0.9
2,319,396	+		MPMX19_02215	0.16	-0.1
2,319,396	+		MPMX19_02215	0.16	+0.6
2,319,396	+		MPMX19_02215	0.16	-0.3
2,319,397	-		MPMX19_02215	0.16	+1.7
2,319,397	-		MPMX19_02215	0.16	-1.0
2,319,397	-		MPMX19_02215	0.16	-2.1
2,319,397	-		MPMX19_02215	0.16	+0.3
2,319,397	-		MPMX19_02215	0.16	-0.7
2,319,397	-		MPMX19_02215	0.16	+0.1
2,319,397	-		MPMX19_02215	0.16	+0.4
2,319,397	-		MPMX19_02215	0.16	-0.3
2,319,447	+		MPMX19_02215	0.19	+1.9
2,319,447	+		MPMX19_02215	0.19	-1.0
2,319,447	+		MPMX19_02215	0.19	-0.5
2,319,447	+		MPMX19_02215	0.19	-0.5
2,319,447	+		MPMX19_02215	0.19	+0.1
2,319,448	-		MPMX19_02215	0.19	-1.1
2,319,448	-		MPMX19_02215	0.19	-0.0
2,319,448	-		MPMX19_02215	0.19	+0.2
2,319,448	-		MPMX19_02215	0.19	-0.5
2,319,448	-		MPMX19_02215	0.19	-1.4
2,319,456	+		MPMX19_02215	0.20	-1.6
2,319,456	+		MPMX19_02215	0.20	-0.2
2,319,457	-		MPMX19_02215	0.20	+0.5
2,319,459	+		MPMX19_02215	0.20	-0.5
2,319,459	+		MPMX19_02215	0.20	-0.8
2,319,459	+		MPMX19_02215	0.20	+0.0
2,319,459	+		MPMX19_02215	0.20	+1.3
2,319,459	+		MPMX19_02215	0.20	+0.1
2,319,459	+		MPMX19_02215	0.20	-0.9
2,319,459	+		MPMX19_02215	0.20	+1.0
2,319,459	+		MPMX19_02215	0.20	-0.5
2,319,459	+		MPMX19_02215	0.20	-0.5
2,319,459	+		MPMX19_02215	0.20	-0.3
2,319,459	+		MPMX19_02215	0.20	+2.4
2,319,460	-		MPMX19_02215	0.20	-0.8
2,319,460	-		MPMX19_02215	0.20	-1.3
2,319,460	-		MPMX19_02215	0.20	-1.5
2,319,460	-		MPMX19_02215	0.20	-1.1
2,319,460	-		MPMX19_02215	0.20	-1.2
2,319,460	-		MPMX19_02215	0.20	+0.1
2,319,460	-		MPMX19_02215	0.20	-1.0
2,319,460	-		MPMX19_02215	0.20	-0.2
2,319,460	-		MPMX19_02215	0.20	-1.1
2,319,460	-		MPMX19_02215	0.20	-1.2
2,319,460	-		MPMX19_02215	0.20	+0.9
2,319,460	-		MPMX19_02215	0.20	+0.2
2,319,460	-		MPMX19_02215	0.20	-1.2
2,319,460	-		MPMX19_02215	0.20	+1.6
2,319,460	-		MPMX19_02215	0.20	-1.7
2,319,460	-		MPMX19_02215	0.20	-2.2
2,319,460	-		MPMX19_02215	0.20	-0.6
2,319,492	+		MPMX19_02215	0.22	+0.5
2,319,492	+		MPMX19_02215	0.22	-0.7
2,319,492	+		MPMX19_02215	0.22	-0.6
2,319,492	+		MPMX19_02215	0.22	+0.0
2,319,492	+		MPMX19_02215	0.22	+0.3
2,319,492	+		MPMX19_02215	0.22	-0.7
2,319,492	+		MPMX19_02215	0.22	+0.4
2,319,492	+		MPMX19_02215	0.22	-2.0
2,319,492	+		MPMX19_02215	0.22	-0.2
2,319,492	+		MPMX19_02215	0.22	+0.3
2,319,492	+		MPMX19_02215	0.22	+0.3
2,319,492	+		MPMX19_02215	0.22	-1.5
2,319,492	+		MPMX19_02215	0.22	-1.2
2,319,492	+		MPMX19_02215	0.22	-1.3
2,319,492	+		MPMX19_02215	0.22	-0.9
2,319,492	+		MPMX19_02215	0.22	-0.7
2,319,492	+		MPMX19_02215	0.22	-1.7
2,319,493	-		MPMX19_02215	0.22	+1.0
2,319,493	-		MPMX19_02215	0.22	-0.0
2,319,493	-		MPMX19_02215	0.22	-0.3
2,319,493	-		MPMX19_02215	0.22	-0.5
2,319,493	-		MPMX19_02215	0.22	-1.2
2,319,493	-		MPMX19_02215	0.22	-0.5
2,319,493	-		MPMX19_02215	0.22	-0.5
2,319,493	-		MPMX19_02215	0.22	+0.9
2,319,493	-		MPMX19_02215	0.22	-0.1
2,319,493	-		MPMX19_02215	0.22	-0.4
2,319,493	-		MPMX19_02215	0.22	+1.5
2,319,493	-		MPMX19_02215	0.22	-1.0
2,319,493	-		MPMX19_02215	0.22	+0.1
2,319,493	-		MPMX19_02215	0.22	-0.1
2,319,493	-		MPMX19_02215	0.22	+0.3
2,319,493	-		MPMX19_02215	0.22	-0.9
2,319,567	+		MPMX19_02215	0.27	-0.3
2,319,567	+		MPMX19_02215	0.27	-0.7
2,319,567	+		MPMX19_02215	0.27	-1.3
2,319,567	+		MPMX19_02215	0.27	-1.1
2,319,567	+		MPMX19_02215	0.27	+0.1
2,319,567	+		MPMX19_02215	0.27	-0.1
2,319,567	+		MPMX19_02215	0.27	-1.6
2,319,567	+		MPMX19_02215	0.27	-0.1
2,319,567	+		MPMX19_02215	0.27	+0.1
2,319,567	+		MPMX19_02215	0.27	-0.7
2,319,568	-		MPMX19_02215	0.27	-1.6
2,319,568	-		MPMX19_02215	0.27	-0.1
2,319,568	-		MPMX19_02215	0.27	+0.6
2,319,568	-		MPMX19_02215	0.27	-1.2
2,319,568	-		MPMX19_02215	0.27	-1.1
2,319,568	-		MPMX19_02215	0.27	-1.4
2,319,568	-		MPMX19_02215	0.27	+0.2
2,319,778	+		MPMX19_02215	0.40	+1.3
2,319,783	+		MPMX19_02215	0.40	+1.5
2,319,783	+		MPMX19_02215	0.40	-0.3
2,319,783	+		MPMX19_02215	0.40	-1.3
2,319,783	+		MPMX19_02215	0.40	-2.3
2,319,783	+		MPMX19_02215	0.40	-2.2
2,319,783	+		MPMX19_02215	0.40	+0.5
2,319,783	+		MPMX19_02215	0.40	+0.4
2,319,783	+		MPMX19_02215	0.40	-1.1
2,319,783	+		MPMX19_02215	0.40	-0.8
2,319,783	+		MPMX19_02215	0.40	-0.7
2,319,783	+		MPMX19_02215	0.40	+0.6
2,319,783	+		MPMX19_02215	0.40	-2.4
2,319,783	+		MPMX19_02215	0.40	-0.9
2,319,784	-		MPMX19_02215	0.40	-0.3
2,319,784	-		MPMX19_02215	0.40	+0.5
2,319,784	-		MPMX19_02215	0.40	-0.7
2,319,784	-		MPMX19_02215	0.40	-1.8
2,319,784	-		MPMX19_02215	0.40	-2.0
2,319,784	-		MPMX19_02215	0.40	-0.3
2,319,784	-		MPMX19_02215	0.40	+0.5
2,319,784	-		MPMX19_02215	0.40	-2.3
2,319,784	-		MPMX19_02215	0.40	-0.9
2,319,784	-		MPMX19_02215	0.40	+0.5
2,319,784	-		MPMX19_02215	0.40	-0.7
2,319,784	-		MPMX19_02215	0.40	+0.3
2,319,981	+		MPMX19_02215	0.53	-0.5
2,319,981	+		MPMX19_02215	0.53	-1.8
2,319,981	+		MPMX19_02215	0.53	-0.1
2,319,981	+		MPMX19_02215	0.53	+1.2
2,319,981	+		MPMX19_02215	0.53	-1.8
2,319,981	+		MPMX19_02215	0.53	+0.3
2,319,981	+		MPMX19_02215	0.53	-1.7
2,319,982	-		MPMX19_02215	0.53	+1.1
2,319,982	-		MPMX19_02215	0.53	+0.6
2,319,982	-		MPMX19_02215	0.53	-2.7
2,319,982	-		MPMX19_02215	0.53	+1.1
2,319,982	-		MPMX19_02215	0.53	-2.1
2,319,982	-		MPMX19_02215	0.53	-1.9
2,319,982	-		MPMX19_02215	0.53	+0.7
2,320,050	+		MPMX19_02215	0.57	+1.5
2,320,050	+		MPMX19_02215	0.57	-0.7
2,320,050	+		MPMX19_02215	0.57	-0.1
2,320,050	+		MPMX19_02215	0.57	-1.2
2,320,051	-		MPMX19_02215	0.57	-0.6