Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01910

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,993,019	+		MPMX19_01907	0.66	-0.2
1,993,019	+		MPMX19_01907	0.66	-0.2
1,993,019	+		MPMX19_01907	0.66	+0.9
1,993,019	+		MPMX19_01907	0.66	-0.5
1,993,019	+		MPMX19_01907	0.66	+0.3
1,993,019	+		MPMX19_01907	0.66	+1.4
1,993,019	+		MPMX19_01907	0.66	-0.0
1,993,019	+		MPMX19_01907	0.66	+0.4
1,993,019	+		MPMX19_01907	0.66	+1.3
1,993,019	+		MPMX19_01907	0.66	+0.4
1,993,019	+		MPMX19_01907	0.66	+0.0
1,993,019	+		MPMX19_01907	0.66	-1.2
1,993,020	-		MPMX19_01907	0.67	+0.0
1,993,020	-		MPMX19_01907	0.67	+1.0
1,993,020	-		MPMX19_01907	0.67	-0.0
1,993,020	-		MPMX19_01907	0.67	-0.9
1,993,020	-		MPMX19_01907	0.67	-0.4
1,993,020	-		MPMX19_01907	0.67	-1.2
1,993,020	-		MPMX19_01907	0.67	-0.9
1,993,020	-		MPMX19_01907	0.67	+1.1
1,993,020	-		MPMX19_01907	0.67	+2.2
1,993,020	-		MPMX19_01907	0.67	-0.3
1,993,020	-		MPMX19_01907	0.67	-1.0
1,993,245	+				-1.5
1,993,245	+				+0.0
1,993,245	+				+2.1
1,993,636	+		MPMX19_01909	0.30	+0.3
1,993,762	+		MPMX19_01909	0.62	+0.3
1,993,762	+		MPMX19_01909	0.62	-1.1
1,993,762	+		MPMX19_01909	0.62	+0.2
1,993,762	+		MPMX19_01909	0.62	+0.1
1,993,762	+		MPMX19_01909	0.62	+0.0
1,993,762	+		MPMX19_01909	0.62	-0.9
1,993,762	+		MPMX19_01909	0.62	-0.4
1,993,762	+		MPMX19_01909	0.62	-0.1
1,993,762	+		MPMX19_01909	0.62	-0.2
1,993,762	+		MPMX19_01909	0.62	-0.5
1,993,762	+		MPMX19_01909	0.62	-0.9
1,993,762	+		MPMX19_01909	0.62	+0.5
1,993,762	+		MPMX19_01909	0.62	-0.4
1,993,762	+		MPMX19_01909	0.62	-1.4
1,993,762	+		MPMX19_01909	0.62	+0.0
1,993,763	-		MPMX19_01909	0.62	-1.3
1,993,763	-		MPMX19_01909	0.62	-0.2
1,993,763	-		MPMX19_01909	0.62	-1.1
1,993,763	-		MPMX19_01909	0.62	+0.3
1,993,819	+		MPMX19_01909	0.76	+0.6
1,993,819	+		MPMX19_01909	0.76	-1.7
1,993,819	+		MPMX19_01909	0.76	+0.3
1,993,819	+		MPMX19_01909	0.76	-1.3
1,993,819	+		MPMX19_01909	0.76	-0.5
1,993,819	+		MPMX19_01909	0.76	-0.6
1,993,819	+		MPMX19_01909	0.76	-0.8
1,993,819	+		MPMX19_01909	0.76	-1.2
1,993,819	+		MPMX19_01909	0.76	-0.0
1,993,819	+		MPMX19_01909	0.76	-0.4
1,993,819	+		MPMX19_01909	0.76	-1.0
1,993,819	+		MPMX19_01909	0.76	+0.8
1,993,820	-		MPMX19_01909	0.76	+0.5
1,993,820	-		MPMX19_01909	0.76	-2.4
1,993,820	-		MPMX19_01909	0.76	+0.3
1,993,820	-		MPMX19_01909	0.76	-0.3
1,993,820	-		MPMX19_01909	0.76	-0.3
1,993,820	-		MPMX19_01909	0.76	+1.0
1,993,820	-		MPMX19_01909	0.76	+0.3
1,993,820	-		MPMX19_01909	0.76	+0.0
1,993,820	-		MPMX19_01909	0.76	+0.3
1,993,820	-		MPMX19_01909	0.76	-2.5
1,993,820	-		MPMX19_01909	0.76	-0.6
1,993,820	-		MPMX19_01909	0.76	+0.1
1,993,820	-		MPMX19_01909	0.76	-0.5
1,993,820	-		MPMX19_01909	0.76	-1.3
1,993,825	+		MPMX19_01909	0.77	+0.4
1,993,825	+		MPMX19_01909	0.77	-1.5
1,993,826	-		MPMX19_01909	0.78	+0.1
1,993,826	-		MPMX19_01909	0.78	+0.1
1,993,826	-		MPMX19_01909	0.78	-1.0
1,993,826	-		MPMX19_01909	0.78	-1.1
1,993,864	+		MPMX19_01909	0.87	-2.6
1,993,864	+		MPMX19_01909	0.87	-0.1
1,993,864	+		MPMX19_01909	0.87	+0.2
1,993,864	+		MPMX19_01909	0.87	-0.7
1,993,864	+		MPMX19_01909	0.87	-0.9
1,993,864	+		MPMX19_01909	0.87	-0.7
1,993,865	-		MPMX19_01909	0.87	-0.9
1,993,865	-		MPMX19_01909	0.87	-0.9
1,993,865	-		MPMX19_01909	0.87	-1.3
1,993,893	+				-1.3
1,993,893	+				-0.2
1,995,513	-				+0.4
1,995,611	+				+0.1
1,995,611	+				+1.3
1,995,612	-				-2.6
1,995,612	-				+0.2
1,995,612	-				-1.3
1,995,668	+				-0.3
1,995,670	+				-1.1
1,995,670	+				+1.0
1,995,670	+				-0.7
1,995,670	+				+0.3
1,995,670	+				+0.0
1,995,670	+				+0.4
1,995,670	+				-0.2
1,995,670	+				-0.7
1,995,670	+				-1.6
1,995,670	+				-0.4
1,995,670	+				-0.6
1,995,670	+				-0.9
1,995,670	+				+0.1
1,995,670	+				-1.3
1,995,670	+				-1.7
1,995,670	+				+0.9
1,995,670	+				+0.7
1,995,670	+				-0.7
1,995,670	+				-1.0
1,995,670	+				-1.3
1,995,670	+				-1.0
1,995,670	+				-0.7
1,995,670	+				+0.2
1,995,670	+				+0.1
1,995,670	+				-1.5
1,995,670	+				-1.5
1,995,670	+				-0.3
1,995,670	+				+1.1
1,995,670	+				-0.2
1,995,670	+				+0.6
1,995,670	+				-0.7
1,995,670	+				-0.1
1,995,670	+				+1.1
1,995,670	+				-0.9
1,995,670	+				-0.1
1,995,670	+				-0.3
1,995,670	+				-2.1
1,995,670	+				-1.7
1,995,670	+				-0.0
1,995,670	+				-1.4
1,995,670	+				+0.4
1,995,670	+				-0.3
1,995,670	+				-0.7
1,995,670	+				-0.8
1,995,670	+				-0.9
1,995,670	+				-0.3
1,995,670	+				-1.6
1,995,671	-				-0.1
1,995,671	-				-0.9
1,995,671	-				-0.5
1,995,671	-				+0.6
1,995,671	-				-1.3
1,995,671	-				-0.5
1,995,671	-				+0.4
1,995,671	-				+0.1
1,995,671	-				-1.5
1,995,671	-				-0.9
1,995,671	-				-1.0
1,995,671	-				-0.5
1,995,671	-				-0.3
1,995,671	-				-1.5
1,995,671	-				+1.7
1,995,671	-				-2.0
1,995,671	-				-1.3
1,995,671	-				+0.5
1,995,671	-				-0.5
1,995,671	-				+0.9
1,995,671	-				-2.5
1,995,671	-				+0.4
1,995,671	-				-1.5
1,995,671	-				-0.4
1,995,671	-				+0.5
1,995,671	-				+0.4
1,995,671	-				+0.1
1,995,671	-				-0.1
1,995,671	-				+0.1
1,995,671	-				-1.7
1,995,671	-				+1.5
1,995,671	-				+0.5
1,995,671	-				-2.2
1,995,671	-				+0.1
1,995,671	-				-0.1
1,995,671	-				-1.7
1,995,671	-				-1.3
1,995,671	-				-1.1
1,995,671	-				-1.7
1,995,671	-				-2.4
1,995,671	-				-0.5
1,995,671	-				-0.6
1,995,671	-				-2.8
1,995,671	-				-0.2
1,995,671	-				+0.7
1,995,671	-				-3.4
1,995,671	-				-0.2
1,995,671	-				+1.0
1,995,671	-				+0.0
1,995,671	-				-0.2
1,995,671	-				+0.0
1,995,671	-				-1.7
1,995,671	-				-1.3
1,995,671	-				-1.1
1,995,739	+		MPMX19_01911	0.10	-0.2
1,995,739	+		MPMX19_01911	0.10	+0.5
1,995,739	+		MPMX19_01911	0.10	-1.3
1,995,739	+		MPMX19_01911	0.10	+0.7
1,995,739	+		MPMX19_01911	0.10	+0.1
1,995,739	+		MPMX19_01911	0.10	+0.9
1,995,739	+		MPMX19_01911	0.10	-0.6
1,995,739	+		MPMX19_01911	0.10	-0.3
1,995,739	+		MPMX19_01911	0.10	-0.8
1,995,739	+		MPMX19_01911	0.10	-0.5
1,995,739	+		MPMX19_01911	0.10	-0.1
1,995,739	+		MPMX19_01911	0.10	+1.3
1,995,740	-		MPMX19_01911	0.10	-1.1
1,995,740	-		MPMX19_01911	0.10	-2.0
1,995,740	-		MPMX19_01911	0.10	-1.3
1,995,740	-		MPMX19_01911	0.10	-0.3
1,995,740	-		MPMX19_01911	0.10	-0.9
1,995,740	-		MPMX19_01911	0.10	+0.6
1,995,740	-		MPMX19_01911	0.10	+0.7
1,995,740	-		MPMX19_01911	0.10	-0.8
1,995,853	+		MPMX19_01911	0.26	-1.5
1,995,853	+		MPMX19_01911	0.26	-0.8
1,995,853	+		MPMX19_01911	0.26	-0.5
1,995,853	+		MPMX19_01911	0.26	+1.7
1,995,854	-		MPMX19_01911	0.26	+0.3
1,995,854	-		MPMX19_01911	0.26	-2.0
1,995,854	-		MPMX19_01911	0.26	+0.6
1,995,854	-		MPMX19_01911	0.26	-1.7
1,995,854	-		MPMX19_01911	0.26	-1.0
1,995,854	-		MPMX19_01911	0.26	-1.9
1,995,949	+		MPMX19_01911	0.39	+0.8
1,995,949	+		MPMX19_01911	0.39	+0.7
1,995,949	+		MPMX19_01911	0.39	-1.6
1,995,949	+		MPMX19_01911	0.39	-1.5
1,995,949	+		MPMX19_01911	0.39	-1.7
1,995,949	+		MPMX19_01911	0.39	-0.5
1,995,949	+		MPMX19_01911	0.39	+1.7
1,995,950	-		MPMX19_01911	0.39	+0.3
1,995,950	-		MPMX19_01911	0.39	+0.7
1,995,950	-		MPMX19_01911	0.39	-1.5
1,995,950	-		MPMX19_01911	0.39	+0.2
1,995,950	-		MPMX19_01911	0.39	-1.6
1,995,964	+		MPMX19_01911	0.41	-2.3
1,995,965	-		MPMX19_01911	0.41	+0.9
1,995,965	-		MPMX19_01911	0.41	-0.5
1,995,965	-		MPMX19_01911	0.41	+1.4
1,996,102	+		MPMX19_01911	0.60	+0.4
1,996,102	+		MPMX19_01911	0.60	-1.0
1,996,102	+		MPMX19_01911	0.60	-0.2
1,996,102	+		MPMX19_01911	0.60	+0.4
1,996,102	+		MPMX19_01911	0.60	-0.3
1,996,102	+		MPMX19_01911	0.60	-1.5
1,996,102	+		MPMX19_01911	0.60	-1.3
1,996,102	+		MPMX19_01911	0.60	-0.8
1,996,102	+		MPMX19_01911	0.60	-1.3
1,996,102	+		MPMX19_01911	0.60	-1.6
1,996,102	+		MPMX19_01911	0.60	-0.6
1,996,102	+		MPMX19_01911	0.60	+0.4
1,996,103	-		MPMX19_01911	0.60	-1.5
1,996,103	-		MPMX19_01911	0.60	-0.9
1,996,103	-		MPMX19_01911	0.60	-2.5
1,996,103	-		MPMX19_01911	0.60	-0.9
1,996,103	-		MPMX19_01911	0.60	+0.1
1,996,103	-		MPMX19_01911	0.60	-0.2
1,996,103	-		MPMX19_01911	0.60	-1.1
1,996,234	+		MPMX19_01911	0.79	+0.4
1,996,234	+		MPMX19_01911	0.79	+0.1
1,996,234	+		MPMX19_01911	0.79	-0.5
1,996,234	+		MPMX19_01911	0.79	-0.2
1,996,234	+		MPMX19_01911	0.79	-1.3
1,996,234	+		MPMX19_01911	0.79	+0.2
1,996,234	+		MPMX19_01911	0.79	-1.9
1,996,234	+		MPMX19_01911	0.79	-1.7
1,996,235	-		MPMX19_01911	0.79	-0.8
1,996,235	-		MPMX19_01911	0.79	-0.2
1,996,235	-		MPMX19_01911	0.79	-0.6
1,996,235	-		MPMX19_01911	0.79	+0.9
1,996,235	-		MPMX19_01911	0.79	-0.3
1,996,235	-		MPMX19_01911	0.79	-2.1
1,996,291	+		MPMX19_01911	0.86	-2.2
1,996,291	+		MPMX19_01911	0.86	+0.8
1,996,291	+		MPMX19_01911	0.86	-2.7
1,996,291	+		MPMX19_01911	0.86	+0.0
1,996,291	+		MPMX19_01911	0.86	+0.9
1,996,291	+		MPMX19_01911	0.86	+0.3
1,996,291	+		MPMX19_01911	0.86	-1.5
1,996,291	+		MPMX19_01911	0.86	-0.9
1,996,291	+		MPMX19_01911	0.86	+0.1
1,996,291	+		MPMX19_01911	0.86	-0.9
1,996,292	-		MPMX19_01911	0.87	-0.6
1,996,292	-		MPMX19_01911	0.87	-0.4
1,996,292	-		MPMX19_01911	0.87	-0.2
1,996,292	-		MPMX19_01911	0.87	-1.3
1,996,309	+		MPMX19_01911	0.89	-0.9
1,996,309	+		MPMX19_01911	0.89	-0.3
1,996,309	+		MPMX19_01911	0.89	-0.1
1,996,309	+		MPMX19_01911	0.89	-1.1
1,996,309	+		MPMX19_01911	0.89	-0.2
1,996,309	+		MPMX19_01911	0.89	-0.9
1,996,309	+		MPMX19_01911	0.89	-0.4
1,996,309	+		MPMX19_01911	0.89	-1.5
1,996,310	-		MPMX19_01911	0.89	-0.3
1,996,310	-		MPMX19_01911	0.89	-0.6
1,996,310	-		MPMX19_01911	0.89	+0.5
1,996,358	+				+0.1
1,996,359	-				-1.7
1,996,388	+				-0.7
1,996,388	+				-0.8
1,996,388	+				-0.8
1,996,388	+				-0.0
1,996,388	+				-0.8
1,996,388	+				-0.9
1,996,389	-				-1.6
1,996,389	-				-0.9
1,996,389	-				-0.6
1,996,389	-				+0.7
1,996,389	-				-0.3
1,996,389	-				-1.3
1,996,389	-				+0.4
1,996,407	+				-1.6
1,996,407	+				+1.2
1,996,407	+				+1.4
1,996,407	+				-0.5