Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01343

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,395,896	+		MPMX19_01341	0.65	+1.9
1,395,896	+		MPMX19_01341	0.65	+0.6
1,395,896	+		MPMX19_01341	0.65	-1.1
1,395,896	+		MPMX19_01341	0.65	-0.5
1,395,896	+		MPMX19_01341	0.65	+0.2
1,395,896	+		MPMX19_01341	0.65	-0.7
1,395,896	+		MPMX19_01341	0.65	+1.6
1,395,896	+		MPMX19_01341	0.65	-0.4
1,395,896	+		MPMX19_01341	0.65	+1.0
1,395,897	-		MPMX19_01341	0.65	-1.8
1,395,897	-		MPMX19_01341	0.65	-0.2
1,395,897	-		MPMX19_01341	0.65	-2.2
1,395,897	-		MPMX19_01341	0.65	-0.2
1,395,897	-		MPMX19_01341	0.65	-0.5
1,395,897	-		MPMX19_01341	0.65	+0.1
1,395,897	-		MPMX19_01341	0.65	-0.7
1,395,968	+		MPMX19_01341	0.76	+1.9
1,395,968	+		MPMX19_01341	0.76	-0.2
1,395,968	+		MPMX19_01341	0.76	-1.6
1,395,968	+		MPMX19_01341	0.76	+2.6
1,395,968	+		MPMX19_01341	0.76	-0.4
1,395,968	+		MPMX19_01341	0.76	+1.1
1,395,968	+		MPMX19_01341	0.76	-1.4
1,395,968	+		MPMX19_01341	0.76	+1.1
1,395,968	+		MPMX19_01341	0.76	+0.9
1,395,968	+		MPMX19_01341	0.76	+0.3
1,395,968	+		MPMX19_01341	0.76	-1.7
1,395,968	+		MPMX19_01341	0.76	-0.4
1,395,968	+		MPMX19_01341	0.76	-1.2
1,395,969	-		MPMX19_01341	0.76	+0.6
1,395,969	-		MPMX19_01341	0.76	-0.4
1,395,969	-		MPMX19_01341	0.76	+0.1
1,395,969	-		MPMX19_01341	0.76	+0.1
1,395,969	-		MPMX19_01341	0.76	-1.4
1,395,969	-		MPMX19_01341	0.76	-0.1
1,395,969	-		MPMX19_01341	0.76	+1.6
1,395,969	-		MPMX19_01341	0.76	+0.6
1,395,969	-		MPMX19_01341	0.76	-0.4
1,395,969	-		MPMX19_01341	0.76	-0.1
1,396,007	+		MPMX19_01341	0.82	+0.8
1,396,007	+		MPMX19_01341	0.82	-1.9
1,396,007	+		MPMX19_01341	0.82	-2.4
1,396,007	+		MPMX19_01341	0.82	-0.2
1,396,007	+		MPMX19_01341	0.82	-1.2
1,396,007	+		MPMX19_01341	0.82	-0.4
1,396,007	+		MPMX19_01341	0.82	+0.3
1,396,008	-		MPMX19_01341	0.82	+0.3
1,396,008	-		MPMX19_01341	0.82	+1.6
1,396,008	-		MPMX19_01341	0.82	-0.7
1,396,008	-		MPMX19_01341	0.82	-0.1
1,396,008	-		MPMX19_01341	0.82	+1.6
1,396,161	-				-0.4
1,396,238	+				+1.6
1,396,238	+				+0.3
1,396,238	+				-1.1
1,396,594	+		MPMX19_01342	0.64	-1.7
1,396,594	+		MPMX19_01342	0.64	-1.6
1,396,594	+		MPMX19_01342	0.64	+0.9
1,396,594	+		MPMX19_01342	0.64	+0.2
1,396,595	-		MPMX19_01342	0.64	-0.3
1,396,595	-		MPMX19_01342	0.64	-1.8
1,396,595	-		MPMX19_01342	0.64	-1.7
1,396,595	-		MPMX19_01342	0.64	-0.7
1,396,794	+				+0.0
1,396,794	+				-0.3
1,396,794	+				-0.7
1,396,794	+				-2.1
1,396,794	+				-1.7
1,396,794	+				+0.1
1,396,794	+				+0.3
1,396,794	+				+0.2
1,396,795	-				-0.2
1,396,795	-				-0.4
1,396,795	-				+0.8
1,396,795	-				-0.9
1,396,795	-				+0.1
1,396,795	-				-0.1
1,396,795	-				+0.1
1,396,810	+				+0.6
1,396,810	+				-0.2
1,396,810	+				-1.2
1,396,811	-				-0.0
1,396,856	+				+0.4
1,397,103	+		MPMX19_01343	0.15	-0.4
1,397,103	+		MPMX19_01343	0.15	-0.2
1,397,103	+		MPMX19_01343	0.15	+0.8
1,397,103	+		MPMX19_01343	0.15	-1.7
1,397,103	+		MPMX19_01343	0.15	+0.2
1,397,104	-		MPMX19_01343	0.15	-0.1
1,397,104	-		MPMX19_01343	0.15	-0.5
1,397,104	-		MPMX19_01343	0.15	+0.1
1,397,104	-		MPMX19_01343	0.15	-0.9
1,397,104	-		MPMX19_01343	0.15	-0.4
1,397,104	-		MPMX19_01343	0.15	-0.8
1,397,157	+		MPMX19_01343	0.19	-2.5
1,397,157	+		MPMX19_01343	0.19	-1.1
1,397,157	+		MPMX19_01343	0.19	+0.1
1,397,157	+		MPMX19_01343	0.19	+0.4
1,397,157	+		MPMX19_01343	0.19	-1.5
1,397,157	+		MPMX19_01343	0.19	-1.9
1,397,157	+		MPMX19_01343	0.19	+1.3
1,397,157	+		MPMX19_01343	0.19	+1.6
1,397,157	+		MPMX19_01343	0.19	+0.1
1,397,158	-		MPMX19_01343	0.19	-0.4
1,397,158	-		MPMX19_01343	0.19	-1.4
1,397,158	-		MPMX19_01343	0.19	-1.8
1,397,158	-		MPMX19_01343	0.19	-1.1
1,397,158	-		MPMX19_01343	0.19	+0.6
1,397,158	-		MPMX19_01343	0.19	-0.8
1,397,158	-		MPMX19_01343	0.19	-1.1
1,397,158	-		MPMX19_01343	0.19	-3.2
1,397,158	-		MPMX19_01343	0.19	+0.3
1,397,779	+		MPMX19_01343	0.60	-0.9
1,397,779	+		MPMX19_01343	0.60	+0.4
1,397,779	+		MPMX19_01343	0.60	-0.4
1,397,779	+		MPMX19_01343	0.60	-0.2
1,397,780	-		MPMX19_01343	0.60	-0.4
1,397,780	-		MPMX19_01343	0.60	+0.5
1,397,780	-		MPMX19_01343	0.60	-0.2
1,397,780	-		MPMX19_01343	0.60	+1.9
1,397,780	-		MPMX19_01343	0.60	+0.9
1,397,780	-		MPMX19_01343	0.60	-1.6
1,397,780	-		MPMX19_01343	0.60	+2.1
1,397,781	+		MPMX19_01343	0.60	+2.6
1,397,781	+		MPMX19_01343	0.60	-0.2
1,397,781	+		MPMX19_01343	0.60	+0.4
1,397,781	+		MPMX19_01343	0.60	-1.4
1,397,781	+		MPMX19_01343	0.60	-1.5
1,397,781	+		MPMX19_01343	0.60	-0.9
1,397,781	+		MPMX19_01343	0.60	-2.1
1,397,781	+		MPMX19_01343	0.60	-0.6
1,397,781	+		MPMX19_01343	0.60	-1.4
1,397,781	+		MPMX19_01343	0.60	+0.3
1,397,782	-		MPMX19_01343	0.60	-0.7
1,397,782	-		MPMX19_01343	0.60	+1.1
1,397,782	-		MPMX19_01343	0.60	-0.2
1,397,782	-		MPMX19_01343	0.60	+0.3
1,397,782	-		MPMX19_01343	0.60	-0.6
1,397,782	-		MPMX19_01343	0.60	+0.4
1,397,782	-		MPMX19_01343	0.60	+1.6
1,397,782	-		MPMX19_01343	0.60	+0.2
1,397,782	-		MPMX19_01343	0.60	+0.1
1,397,782	-		MPMX19_01343	0.60	+0.1
1,397,782	-		MPMX19_01343	0.60	+0.2
1,397,788	+		MPMX19_01343	0.61	-1.2
1,397,788	+		MPMX19_01343	0.61	-1.1
1,397,789	-		MPMX19_01343	0.61	-2.9
1,397,789	-		MPMX19_01343	0.61	-0.2
1,397,789	-		MPMX19_01343	0.61	+0.9
1,397,789	-		MPMX19_01343	0.61	+0.9
1,397,790	+		MPMX19_01343	0.61	+1.9
1,397,790	+		MPMX19_01343	0.61	-0.2
1,397,790	+		MPMX19_01343	0.61	-0.8
1,397,790	+		MPMX19_01343	0.61	+1.1
1,397,791	-		MPMX19_01343	0.61	+0.6
1,397,791	-		MPMX19_01343	0.61	-1.9
1,397,791	-		MPMX19_01343	0.61	-0.1
1,397,791	-		MPMX19_01343	0.61	+0.5
1,397,791	-		MPMX19_01343	0.61	-2.2
1,397,791	-		MPMX19_01343	0.61	+1.6
1,397,791	-		MPMX19_01343	0.61	+1.0
1,397,791	-		MPMX19_01343	0.61	+1.1
1,397,791	-		MPMX19_01343	0.61	-1.9
1,397,791	-		MPMX19_01343	0.61	-0.9
1,397,791	-		MPMX19_01343	0.61	+0.8
1,397,791	-		MPMX19_01343	0.61	-0.7
1,397,791	-		MPMX19_01343	0.61	-0.5
1,397,791	-		MPMX19_01343	0.61	-0.4
1,397,791	-		MPMX19_01343	0.61	+0.8
1,397,791	-		MPMX19_01343	0.61	-0.5
1,397,791	-		MPMX19_01343	0.61	+0.3
1,397,832	+		MPMX19_01343	0.64	-0.2
1,397,832	+		MPMX19_01343	0.64	+0.1
1,397,832	+		MPMX19_01343	0.64	-0.2
1,397,832	+		MPMX19_01343	0.64	-1.2
1,397,832	+		MPMX19_01343	0.64	+0.3
1,397,832	+		MPMX19_01343	0.64	+0.3
1,397,832	+		MPMX19_01343	0.64	+0.2
1,397,832	+		MPMX19_01343	0.64	+0.1
1,397,832	+		MPMX19_01343	0.64	+0.4
1,397,832	+		MPMX19_01343	0.64	+1.5
1,397,832	+		MPMX19_01343	0.64	-1.5
1,397,832	+		MPMX19_01343	0.64	+0.6
1,397,832	+		MPMX19_01343	0.64	-0.2
1,397,832	+		MPMX19_01343	0.64	+0.6
1,397,832	+		MPMX19_01343	0.64	-1.0
1,397,832	+		MPMX19_01343	0.64	-0.4
1,397,832	+		MPMX19_01343	0.64	-1.2
1,397,832	+		MPMX19_01343	0.64	+1.8
1,397,832	+		MPMX19_01343	0.64	+1.8
1,397,832	+		MPMX19_01343	0.64	-2.1
1,397,832	+		MPMX19_01343	0.64	+0.5
1,397,832	+		MPMX19_01343	0.64	-1.2
1,397,832	+		MPMX19_01343	0.64	+0.8
1,397,832	+		MPMX19_01343	0.64	-0.7
1,397,832	+		MPMX19_01343	0.64	-0.2
1,397,832	+		MPMX19_01343	0.64	-2.3
1,397,832	+		MPMX19_01343	0.64	-0.9
1,397,832	+		MPMX19_01343	0.64	-1.0
1,397,832	+		MPMX19_01343	0.64	-0.1
1,397,832	+		MPMX19_01343	0.64	-2.4
1,397,832	+		MPMX19_01343	0.64	-1.8
1,397,832	+		MPMX19_01343	0.64	-0.0
1,397,832	+		MPMX19_01343	0.64	-1.8
1,397,832	+		MPMX19_01343	0.64	+0.1
1,397,832	+		MPMX19_01343	0.64	+0.2
1,397,832	+		MPMX19_01343	0.64	-0.9
1,397,832	+		MPMX19_01343	0.64	-1.7
1,397,832	+		MPMX19_01343	0.64	-0.7
1,397,832	+		MPMX19_01343	0.64	+0.0
1,397,832	+		MPMX19_01343	0.64	-0.1
1,397,832	+		MPMX19_01343	0.64	-1.5
1,397,832	+		MPMX19_01343	0.64	-1.3
1,397,832	+		MPMX19_01343	0.64	-1.2
1,397,832	+		MPMX19_01343	0.64	-0.7
1,397,832	+		MPMX19_01343	0.64	+0.3
1,397,833	-		MPMX19_01343	0.64	-0.4
1,397,833	-		MPMX19_01343	0.64	-0.6
1,397,833	-		MPMX19_01343	0.64	-0.5
1,397,833	-		MPMX19_01343	0.64	-0.5
1,397,833	-		MPMX19_01343	0.64	+0.2
1,397,833	-		MPMX19_01343	0.64	+0.4
1,397,833	-		MPMX19_01343	0.64	+1.4
1,397,833	-		MPMX19_01343	0.64	-0.3
1,397,833	-		MPMX19_01343	0.64	-0.4
1,397,833	-		MPMX19_01343	0.64	-0.6
1,397,833	-		MPMX19_01343	0.64	-0.2
1,397,833	-		MPMX19_01343	0.64	+0.9
1,397,833	-		MPMX19_01343	0.64	-0.2
1,397,833	-		MPMX19_01343	0.64	+1.4
1,397,833	-		MPMX19_01343	0.64	-1.9
1,397,833	-		MPMX19_01343	0.64	-0.5
1,397,833	-		MPMX19_01343	0.64	+0.1
1,397,833	-		MPMX19_01343	0.64	-1.5
1,397,833	-		MPMX19_01343	0.64	+0.3
1,397,833	-		MPMX19_01343	0.64	-0.1
1,397,833	-		MPMX19_01343	0.64	-1.1
1,397,833	-		MPMX19_01343	0.64	-0.7
1,397,833	-		MPMX19_01343	0.64	-0.7
1,397,833	-		MPMX19_01343	0.64	-0.7
1,397,833	-		MPMX19_01343	0.64	+0.1
1,397,833	-		MPMX19_01343	0.64	+0.8
1,397,833	-		MPMX19_01343	0.64	-0.5
1,397,833	-		MPMX19_01343	0.64	+0.8
1,397,833	-		MPMX19_01343	0.64	+1.3
1,397,833	-		MPMX19_01343	0.64	+2.1
1,397,833	-		MPMX19_01343	0.64	-0.9
1,397,833	-		MPMX19_01343	0.64	-0.7
1,397,833	-		MPMX19_01343	0.64	-0.9
1,397,833	-		MPMX19_01343	0.64	-0.7
1,397,833	-		MPMX19_01343	0.64	-0.7
1,397,833	-		MPMX19_01343	0.64	-0.1
1,397,833	-		MPMX19_01343	0.64	-0.4
1,397,833	-		MPMX19_01343	0.64	-1.3
1,397,833	-		MPMX19_01343	0.64	-1.4
1,397,833	-		MPMX19_01343	0.64	-1.8
1,397,833	-		MPMX19_01343	0.64	-0.8
1,397,833	-		MPMX19_01343	0.64	+0.6
1,397,833	-		MPMX19_01343	0.64	+0.6
1,397,953	-		MPMX19_01343	0.72	-1.8
1,397,953	-		MPMX19_01343	0.72	+0.1
1,397,953	-		MPMX19_01343	0.72	-0.9
1,397,953	-		MPMX19_01343	0.72	+0.5
1,397,953	-		MPMX19_01343	0.72	-1.2
1,397,953	-		MPMX19_01343	0.72	-1.5
1,397,959	-		MPMX19_01343	0.72	+0.1
1,397,959	-		MPMX19_01343	0.72	-0.6
1,397,959	-		MPMX19_01343	0.72	+0.8
1,397,959	-		MPMX19_01343	0.72	-0.2
1,397,959	-		MPMX19_01343	0.72	-1.9
1,397,959	-		MPMX19_01343	0.72	-1.0
1,398,060	+		MPMX19_01343	0.79	-0.4
1,398,060	+		MPMX19_01343	0.79	+1.3
1,398,060	+		MPMX19_01343	0.79	-0.8
1,398,060	+		MPMX19_01343	0.79	-1.2
1,398,060	+		MPMX19_01343	0.79	-0.2
1,398,060	+		MPMX19_01343	0.79	-0.1
1,398,060	+		MPMX19_01343	0.79	-1.4
1,398,060	+		MPMX19_01343	0.79	-2.1
1,398,061	-		MPMX19_01343	0.79	+0.2
1,398,061	-		MPMX19_01343	0.79	-1.6
1,398,061	-		MPMX19_01343	0.79	-0.1
1,398,061	-		MPMX19_01343	0.79	-1.4
1,398,061	-		MPMX19_01343	0.79	-0.4
1,398,061	-		MPMX19_01343	0.79	+0.1
1,398,061	-		MPMX19_01343	0.79	+0.7
1,398,061	-		MPMX19_01343	0.79	-0.7
1,398,358	+				-1.1
1,398,358	+				+0.3
1,398,358	+				-0.5
1,398,359	-				+0.9
1,398,368	+				-0.4
1,398,369	-				-0.9
1,398,377	+				+0.4
1,398,377	+				+1.1
1,398,377	+				+0.2
1,398,377	+				+0.5
1,398,377	+				-1.5
1,398,377	+				-1.4
1,398,377	+				+0.3
1,398,378	-				+1.0
1,398,378	-				-1.0
1,398,378	-				-0.6
1,398,378	-				+0.3
1,398,378	-				+0.1
1,398,378	-				-1.8
1,398,378	-				+1.2
1,398,378	-				-1.7
1,398,378	-				-0.7
1,398,378	-				-0.9
1,398,378	-				+0.2
1,398,378	-				+0.3
1,398,378	-				-0.9
1,398,378	-				+0.9
1,398,402	+				-0.3
1,398,402	+				+0.2
1,398,402	+				-0.4
1,398,402	+				+0.3
1,398,402	+				+0.3
1,398,402	+				+2.2
1,398,402	+				-1.4
1,398,402	+				+0.1
1,398,402	+				+0.5
1,398,402	+				-0.0
1,398,403	-				-0.7
1,398,403	-				-1.4
1,398,403	-				+0.1
1,398,403	-				-0.4
1,398,403	-				-1.4
1,398,403	-				-0.4
1,398,403	-				+0.4
1,398,403	-				-1.0
1,398,403	-				-0.4
1,398,403	-				-0.6
1,398,715	+		MPMX19_01344	0.58	-1.4
1,398,715	+		MPMX19_01344	0.58	-0.9
1,398,715	+		MPMX19_01344	0.58	-0.7
1,398,715	+		MPMX19_01344	0.58	-0.5
1,398,716	-		MPMX19_01344	0.58	-0.7
1,398,716	-		MPMX19_01344	0.58	-1.2
1,398,716	-		MPMX19_01344	0.58	-0.5
1,398,716	-		MPMX19_01344	0.58	+0.6
1,398,716	-		MPMX19_01344	0.58	-1.8
1,398,736	+		MPMX19_01344	0.62	+0.3
1,398,736	+		MPMX19_01344	0.62	+1.2
1,398,736	+		MPMX19_01344	0.62	-0.4
1,398,736	+		MPMX19_01344	0.62	-0.4
1,398,736	+		MPMX19_01344	0.62	-0.4
1,398,736	+		MPMX19_01344	0.62	+0.7
1,398,737	-		MPMX19_01344	0.62	-0.2
1,398,737	-		MPMX19_01344	0.62	-0.8
1,398,737	-		MPMX19_01344	0.62	-0.5
1,398,737	-		MPMX19_01344	0.62	+0.1
1,398,737	-		MPMX19_01344	0.62	-0.4
1,398,737	-		MPMX19_01344	0.62	+0.1
1,398,737	-		MPMX19_01344	0.62	-1.2
1,398,737	-		MPMX19_01344	0.62	+1.1
1,398,774	+		MPMX19_01344	0.69	+1.1
1,398,774	+		MPMX19_01344	0.69	+1.3
1,398,774	+		MPMX19_01344	0.69	-2.6
1,398,774	+		MPMX19_01344	0.69	-0.2
1,398,774	+		MPMX19_01344	0.69	-0.7
1,398,774	+		MPMX19_01344	0.69	-1.3
1,398,775	-		MPMX19_01344	0.69	-0.6
1,398,775	-		MPMX19_01344	0.69	+0.2
1,398,775	-		MPMX19_01344	0.69	+0.5
1,398,775	-		MPMX19_01344	0.69	-0.7
1,398,775	-		MPMX19_01344	0.69	-1.9
1,398,775	-		MPMX19_01344	0.69	+1.2
1,398,775	-		MPMX19_01344	0.69	-0.8
1,398,775	-		MPMX19_01344	0.69	-0.9
1,398,775	-		MPMX19_01344	0.69	-0.2
1,398,819	+		MPMX19_01344	0.77	-0.5
1,398,819	+		MPMX19_01344	0.77	-1.2
1,398,920	+				+0.4
1,398,920	+				+0.4
1,398,920	+				+1.2
1,398,921	-				-1.9
1,398,921	-				-0.3
1,399,007	+				+0.4
1,399,008	-				-1.2
1,399,045	+				-0.0
1,399,045	+				-0.7
1,399,045	+				+0.1
1,399,045	+				+0.6
1,399,045	+				-0.4
1,399,046	-				-0.4
1,399,046	-				-0.1
1,399,046	-				-0.3
1,399,046	-				-0.8
1,399,046	-				+0.3
1,399,046	-				-0.5
1,399,047	+				-0.4
1,399,048	-				-2.1
1,399,048	-				-0.7
1,399,048	-				-0.8
1,399,057	+				-0.7
1,399,058	-				+1.6
1,399,058	-				-1.9
1,399,058	-				-1.8
1,399,058	-				-0.2
1,399,073	+				+0.4
1,399,073	+				-0.3
1,399,073	+				-1.3
1,399,073	+				-0.5
1,399,073	+				-0.5
1,399,073	+				-0.6
1,399,073	+				-0.3
1,399,074	-				-0.5
1,399,074	-				+0.1
1,399,074	-				-0.5
1,399,074	-				-0.2
1,399,074	-				+0.6
1,399,074	-				-1.7
1,399,104	+				+0.6
1,399,104	+				-0.8
1,399,104	+				+0.3
1,399,105	-				-0.2
1,399,105	-				-0.9
1,399,105	-				-0.9
1,399,105	-				-0.2
1,399,105	-				-0.1
1,399,105	-				+0.1
1,399,115	+				-0.7
1,399,116	-				+0.3
1,399,116	-				+1.2
1,399,119	+				+0.2
1,399,119	+				-1.2
1,399,120	-				-1.5
1,399,120	-				-0.8
1,399,120	-				+0.2
1,399,120	-				-0.9
1,399,120	-				+0.1
1,399,120	-				-1.4
1,399,210	-				-0.2
1,399,210	-				-0.1
1,399,261	+				-0.4
1,399,262	-				-1.1
1,399,262	-				-0.2
1,399,262	-				-0.4
1,399,267	-				-0.1
1,399,267	-				-0.1
1,399,282	+				-0.9
1,399,311	-				-1.3
1,399,311	-				-0.6
1,399,311	-				-0.7
1,399,368	-				-0.2
1,399,368	-				-0.7