Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01339

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,392,275	+		MPMX19_01338	0.46	+0.8
1,392,275	+		MPMX19_01338	0.46	+0.6
1,392,275	+		MPMX19_01338	0.46	+0.5
1,392,275	+		MPMX19_01338	0.46	-0.7
1,392,275	+		MPMX19_01338	0.46	+0.7
1,392,275	+		MPMX19_01338	0.46	+0.0
1,392,276	-		MPMX19_01338	0.46	-2.0
1,392,276	-		MPMX19_01338	0.46	-0.0
1,392,276	-		MPMX19_01338	0.46	+0.1
1,392,276	-		MPMX19_01338	0.46	+0.4
1,392,276	-		MPMX19_01338	0.46	+0.3
1,392,276	-		MPMX19_01338	0.46	-0.5
1,392,276	-		MPMX19_01338	0.46	-1.2
1,392,320	+		MPMX19_01338	0.50	-0.8
1,392,320	+		MPMX19_01338	0.50	+0.2
1,392,320	+		MPMX19_01338	0.50	+0.1
1,392,320	+		MPMX19_01338	0.50	-2.5
1,392,320	+		MPMX19_01338	0.50	-0.2
1,392,320	+		MPMX19_01338	0.50	-0.3
1,392,320	+		MPMX19_01338	0.50	-0.2
1,392,320	+		MPMX19_01338	0.50	-0.2
1,392,320	+		MPMX19_01338	0.50	-1.4
1,392,320	+		MPMX19_01338	0.50	+0.8
1,392,320	+		MPMX19_01338	0.50	-1.4
1,392,320	+		MPMX19_01338	0.50	-0.5
1,392,320	+		MPMX19_01338	0.50	+0.0
1,392,320	+		MPMX19_01338	0.50	-1.2
1,392,320	+		MPMX19_01338	0.50	-0.4
1,392,320	+		MPMX19_01338	0.50	-1.2
1,392,320	+		MPMX19_01338	0.50	+0.3
1,392,320	+		MPMX19_01338	0.50	-0.6
1,392,320	+		MPMX19_01338	0.50	+0.4
1,392,320	+		MPMX19_01338	0.50	-1.2
1,392,320	+		MPMX19_01338	0.50	-1.0
1,392,320	+		MPMX19_01338	0.50	-0.5
1,392,320	+		MPMX19_01338	0.50	-1.6
1,392,320	+		MPMX19_01338	0.50	-0.2
1,392,320	+		MPMX19_01338	0.50	-0.0
1,392,320	+		MPMX19_01338	0.50	+0.1
1,392,320	+		MPMX19_01338	0.50	-0.6
1,392,320	+		MPMX19_01338	0.50	-1.2
1,392,320	+		MPMX19_01338	0.50	+0.0
1,392,320	+		MPMX19_01338	0.50	+0.4
1,392,321	-		MPMX19_01338	0.50	+0.0
1,392,321	-		MPMX19_01338	0.50	+0.3
1,392,321	-		MPMX19_01338	0.50	-1.4
1,392,321	-		MPMX19_01338	0.50	-1.4
1,392,321	-		MPMX19_01338	0.50	-0.4
1,392,321	-		MPMX19_01338	0.50	+0.4
1,392,321	-		MPMX19_01338	0.50	-0.4
1,392,321	-		MPMX19_01338	0.50	-0.8
1,392,321	-		MPMX19_01338	0.50	-0.1
1,392,321	-		MPMX19_01338	0.50	+0.5
1,392,321	-		MPMX19_01338	0.50	-1.5
1,392,321	-		MPMX19_01338	0.50	-0.2
1,392,321	-		MPMX19_01338	0.50	-1.5
1,392,321	-		MPMX19_01338	0.50	-1.9
1,392,321	-		MPMX19_01338	0.50	-0.6
1,392,321	-		MPMX19_01338	0.50	-0.1
1,392,321	-		MPMX19_01338	0.50	-3.9
1,392,321	-		MPMX19_01338	0.50	+1.3
1,392,321	-		MPMX19_01338	0.50	-0.4
1,392,321	-		MPMX19_01338	0.50	+0.8
1,392,321	-		MPMX19_01338	0.50	-1.8
1,392,321	-		MPMX19_01338	0.50	-2.2
1,392,321	-		MPMX19_01338	0.50	-1.2
1,392,321	-		MPMX19_01338	0.50	+0.5
1,392,321	-		MPMX19_01338	0.50	-0.1
1,392,321	-		MPMX19_01338	0.50	-1.3
1,392,321	-		MPMX19_01338	0.50	-0.8
1,392,321	-		MPMX19_01338	0.50	+0.1
1,392,321	-		MPMX19_01338	0.50	-0.3
1,392,321	-		MPMX19_01338	0.50	-2.6
1,392,321	-		MPMX19_01338	0.50	-0.5
1,392,321	-		MPMX19_01338	0.50	-2.0
1,392,321	-		MPMX19_01338	0.50	-1.4
1,392,344	+		MPMX19_01338	0.52	-0.8
1,392,344	+		MPMX19_01338	0.52	-0.3
1,392,345	-		MPMX19_01338	0.53	+0.8
1,392,345	-		MPMX19_01338	0.53	+0.2
1,392,345	-		MPMX19_01338	0.53	-0.1
1,392,345	-		MPMX19_01338	0.53	-0.2
1,392,345	-		MPMX19_01338	0.53	+1.0
1,392,461	+		MPMX19_01338	0.64	+0.2
1,392,461	+		MPMX19_01338	0.64	+0.2
1,392,461	+		MPMX19_01338	0.64	-0.3
1,392,461	+		MPMX19_01338	0.64	-1.2
1,392,461	+		MPMX19_01338	0.64	+0.0
1,392,461	+		MPMX19_01338	0.64	-1.3
1,392,462	-		MPMX19_01338	0.64	-1.8
1,392,462	-		MPMX19_01338	0.64	-1.8
1,392,462	-		MPMX19_01338	0.64	+0.0
1,392,462	-		MPMX19_01338	0.64	+0.3
1,392,462	-		MPMX19_01338	0.64	-1.8
1,392,462	-		MPMX19_01338	0.64	+0.0
1,392,462	-		MPMX19_01338	0.64	-1.0
1,392,462	-		MPMX19_01338	0.64	-0.4
1,392,462	-		MPMX19_01338	0.64	-0.1
1,392,464	+		MPMX19_01338	0.64	-0.1
1,392,464	+		MPMX19_01338	0.64	+0.4
1,392,464	+		MPMX19_01338	0.64	-1.0
1,392,464	+		MPMX19_01338	0.64	-0.2
1,392,464	+		MPMX19_01338	0.64	-1.7
1,392,464	+		MPMX19_01338	0.64	-0.2
1,392,464	+		MPMX19_01338	0.64	-0.8
1,392,464	+		MPMX19_01338	0.64	-0.7
1,392,464	+		MPMX19_01338	0.64	+0.1
1,392,464	+		MPMX19_01338	0.64	-1.5
1,392,464	+		MPMX19_01338	0.64	+0.4
1,392,464	+		MPMX19_01338	0.64	+0.5
1,392,464	+		MPMX19_01338	0.64	+0.2
1,392,464	+		MPMX19_01338	0.64	-1.4
1,392,464	+		MPMX19_01338	0.64	-1.0
1,392,464	+		MPMX19_01338	0.64	+0.0
1,392,464	+		MPMX19_01338	0.64	+0.6
1,392,464	+		MPMX19_01338	0.64	-0.4
1,392,465	-		MPMX19_01338	0.64	-0.7
1,392,465	-		MPMX19_01338	0.64	+1.1
1,392,465	-		MPMX19_01338	0.64	+0.5
1,392,465	-		MPMX19_01338	0.64	+0.9
1,392,465	-		MPMX19_01338	0.64	-0.7
1,392,465	-		MPMX19_01338	0.64	-2.0
1,392,465	-		MPMX19_01338	0.64	-0.6
1,392,465	-		MPMX19_01338	0.64	-1.8
1,392,465	-		MPMX19_01338	0.64	-1.2
1,392,465	-		MPMX19_01338	0.64	-1.7
1,392,465	-		MPMX19_01338	0.64	-2.1
1,392,465	-		MPMX19_01338	0.64	-1.1
1,392,465	-		MPMX19_01338	0.64	-0.1
1,392,465	-		MPMX19_01338	0.64	+0.0
1,392,465	-		MPMX19_01338	0.64	-0.4
1,392,465	-		MPMX19_01338	0.64	-1.3
1,392,465	-		MPMX19_01338	0.64	+0.9
1,392,465	-		MPMX19_01338	0.64	+1.0
1,392,465	-		MPMX19_01338	0.64	+1.4
1,392,465	-		MPMX19_01338	0.64	-1.3
1,392,465	-		MPMX19_01338	0.64	+0.4
1,392,465	-		MPMX19_01338	0.64	+0.2
1,392,465	-		MPMX19_01338	0.64	-0.2
1,392,465	-		MPMX19_01338	0.64	-0.3
1,392,465	-		MPMX19_01338	0.64	-0.1
1,392,465	-		MPMX19_01338	0.64	-0.6
1,392,465	-		MPMX19_01338	0.64	-0.1
1,392,465	-		MPMX19_01338	0.64	-0.0
1,392,465	-		MPMX19_01338	0.64	-0.4
1,392,644	+		MPMX19_01338	0.82	-0.5
1,392,644	+		MPMX19_01338	0.82	+0.0
1,392,644	+		MPMX19_01338	0.82	-2.4
1,392,644	+		MPMX19_01338	0.82	+0.3
1,392,644	+		MPMX19_01338	0.82	-0.6
1,392,644	+		MPMX19_01338	0.82	-0.4
1,392,644	+		MPMX19_01338	0.82	+1.1
1,392,644	+		MPMX19_01338	0.82	-1.5
1,392,644	+		MPMX19_01338	0.82	-0.1
1,392,645	-		MPMX19_01338	0.82	-1.1
1,392,645	-		MPMX19_01338	0.82	+0.0
1,392,645	-		MPMX19_01338	0.82	+1.1
1,392,645	-		MPMX19_01338	0.82	+0.6
1,392,645	-		MPMX19_01338	0.82	-1.9
1,392,828	+				-0.3
1,392,828	+				-0.4
1,392,828	+				-0.5
1,392,828	+				-0.0
1,392,828	+				-0.6
1,392,828	+				-1.5
1,392,828	+				+0.3
1,392,828	+				-0.2
1,392,828	+				+0.3
1,392,828	+				+1.6
1,392,828	+				-1.4
1,392,828	+				-0.1
1,392,828	+				-0.5
1,392,828	+				-0.2
1,392,828	+				-2.0
1,392,828	+				-1.0
1,392,828	+				-0.8
1,392,828	+				-0.7
1,392,828	+				-1.4
1,392,828	+				-1.0
1,392,828	+				-0.6
1,392,828	+				+0.2
1,392,828	+				+0.3
1,392,828	+				-0.7
1,392,828	+				-0.5
1,392,829	-				+0.0
1,392,829	-				-0.7
1,392,829	-				-0.1
1,392,829	-				-0.3
1,392,829	-				+0.5
1,392,829	-				+0.2
1,392,829	-				-1.1
1,392,829	-				-0.8
1,392,829	-				+0.3
1,392,829	-				-0.2
1,392,829	-				+1.0
1,392,829	-				-1.5
1,392,829	-				-1.2
1,392,829	-				-0.7
1,392,831	+				-0.7
1,392,831	+				-1.0
1,392,831	+				-0.7
1,392,831	+				-0.7
1,392,831	+				-1.6
1,392,831	+				-0.1
1,392,831	+				-0.2
1,392,831	+				-1.4
1,392,831	+				+0.2
1,392,831	+				+0.6
1,392,831	+				+0.6
1,392,831	+				+0.5
1,392,831	+				-1.3
1,392,831	+				+0.6
1,392,832	-				-0.1
1,392,832	-				+0.0
1,392,832	-				+0.5
1,392,832	-				-0.1
1,392,832	-				-1.0
1,392,832	-				-1.1
1,392,832	-				-1.3
1,392,832	-				-0.3
1,392,832	-				+0.4
1,392,832	-				+0.0
1,392,832	-				-0.2
1,392,832	-				-1.5
1,392,832	-				-1.8
1,392,832	-				-0.2
1,392,832	-				+0.1
1,392,832	-				-1.1
1,392,903	+				-0.3
1,392,903	+				-0.2
1,392,903	+				-1.5
1,392,903	+				-0.3
1,392,903	+				+0.2
1,392,903	+				+1.5
1,392,903	+				+0.6
1,392,904	-				+1.4
1,392,904	-				-0.4
1,392,904	-				-0.3
1,392,904	-				-1.3
1,392,904	-				+0.6
1,392,904	-				-1.5
1,392,904	-				-0.8
1,392,904	-				-1.4
1,393,017	+				-0.7
1,393,017	+				-0.5
1,393,017	+				-1.8
1,393,017	+				-0.5
1,393,018	-				+1.4
1,393,018	-				-1.0
1,393,018	-				-1.2
1,393,018	-				-0.2
1,393,018	-				+0.3
1,393,018	-				-1.5
1,393,018	-				-0.7
1,393,018	-				-1.1
1,393,064	-				-2.0
1,393,180	+				-2.0
1,393,181	-				-0.5
1,393,315	+				-0.0
1,393,315	+				-1.0
1,393,315	+				+0.5
1,393,315	+				+0.4
1,393,315	+				-1.0
1,393,315	+				-2.5
1,393,315	+				+0.1
1,393,315	+				-0.6
1,393,315	+				+1.6
1,393,315	+				-1.2
1,393,315	+				-1.4
1,393,315	+				+1.9
1,393,315	+				-1.2
1,393,315	+				-1.2
1,393,315	+				-1.2
1,393,315	+				+0.8
1,393,315	+				-1.1
1,393,315	+				+0.6
1,393,315	+				+0.5
1,393,316	-				-2.0
1,393,316	-				+0.3
1,393,316	-				-0.8
1,393,316	-				-1.5
1,393,316	-				+1.2
1,393,316	-				-0.9
1,393,316	-				-0.7
1,393,316	-				-0.2
1,393,316	-				+0.6
1,393,393	+		MPMX19_01339	0.14	-0.5
1,393,393	+		MPMX19_01339	0.14	+0.6
1,393,393	+		MPMX19_01339	0.14	+0.0
1,393,393	+		MPMX19_01339	0.14	-1.7
1,393,393	+		MPMX19_01339	0.14	-1.4
1,393,393	+		MPMX19_01339	0.14	-1.3
1,393,393	+		MPMX19_01339	0.14	-0.4
1,393,393	+		MPMX19_01339	0.14	-0.7
1,393,393	+		MPMX19_01339	0.14	-0.0
1,393,393	+		MPMX19_01339	0.14	-0.8
1,393,393	+		MPMX19_01339	0.14	-1.2
1,393,393	+		MPMX19_01339	0.14	+0.6
1,393,393	+		MPMX19_01339	0.14	-0.6
1,393,393	+		MPMX19_01339	0.14	-0.1
1,393,393	+		MPMX19_01339	0.14	-1.5
1,393,393	+		MPMX19_01339	0.14	-1.6
1,393,393	+		MPMX19_01339	0.14	-1.0
1,393,393	+		MPMX19_01339	0.14	-0.8
1,393,394	-		MPMX19_01339	0.14	-3.0
1,393,394	-		MPMX19_01339	0.14	-0.2
1,393,394	-		MPMX19_01339	0.14	+0.6
1,393,394	-		MPMX19_01339	0.14	-1.8
1,393,394	-		MPMX19_01339	0.14	+0.5
1,393,394	-		MPMX19_01339	0.14	+0.6
1,393,394	-		MPMX19_01339	0.14	+0.2
1,393,394	-		MPMX19_01339	0.14	-2.5
1,393,394	-		MPMX19_01339	0.14	+0.4
1,393,394	-		MPMX19_01339	0.14	-0.2
1,393,394	-		MPMX19_01339	0.14	-2.0
1,393,394	-		MPMX19_01339	0.14	-0.2
1,393,394	-		MPMX19_01339	0.14	-1.2
1,393,394	-		MPMX19_01339	0.14	-1.5
1,393,394	-		MPMX19_01339	0.14	-0.4
1,393,394	-		MPMX19_01339	0.14	+0.2
1,393,394	-		MPMX19_01339	0.14	+0.3
1,393,459	+		MPMX19_01339	0.19	-1.0
1,393,460	-		MPMX19_01339	0.19	-0.4
1,393,558	+		MPMX19_01339	0.28	+0.0
1,393,558	+		MPMX19_01339	0.28	-1.0
1,393,600	+		MPMX19_01339	0.31	-0.7
1,393,601	-		MPMX19_01339	0.31	-1.2
1,393,621	+		MPMX19_01339	0.33	+0.0
1,393,621	+		MPMX19_01339	0.33	+1.0
1,393,621	+		MPMX19_01339	0.33	-0.0
1,393,621	+		MPMX19_01339	0.33	-1.9
1,393,621	+		MPMX19_01339	0.33	+1.1
1,393,621	+		MPMX19_01339	0.33	-0.2
1,393,621	+		MPMX19_01339	0.33	-1.0
1,393,621	+		MPMX19_01339	0.33	+0.4
1,393,621	+		MPMX19_01339	0.33	-0.5
1,393,621	+		MPMX19_01339	0.33	+0.6
1,393,621	+		MPMX19_01339	0.33	-2.1
1,393,621	+		MPMX19_01339	0.33	-0.2
1,393,621	+		MPMX19_01339	0.33	+0.1
1,393,621	+		MPMX19_01339	0.33	-0.6
1,393,621	+		MPMX19_01339	0.33	-1.8
1,393,621	+		MPMX19_01339	0.33	-1.8
1,393,621	+		MPMX19_01339	0.33	+0.5
1,393,622	-		MPMX19_01339	0.33	-1.5
1,393,622	-		MPMX19_01339	0.33	-1.8
1,393,622	-		MPMX19_01339	0.33	-0.5
1,393,622	-		MPMX19_01339	0.33	-1.8
1,393,622	-		MPMX19_01339	0.33	+0.5
1,393,622	-		MPMX19_01339	0.33	-0.4
1,393,622	-		MPMX19_01339	0.33	-1.9
1,393,622	-		MPMX19_01339	0.33	+0.9
1,393,624	-		MPMX19_01339	0.33	-1.0
1,393,724	+		MPMX19_01339	0.42	+1.4
1,393,724	+		MPMX19_01339	0.42	+0.8
1,393,724	+		MPMX19_01339	0.42	-1.5
1,393,725	-		MPMX19_01339	0.42	-1.0
1,393,725	-		MPMX19_01339	0.42	+0.6
1,393,725	-		MPMX19_01339	0.42	-1.4
1,393,796	+		MPMX19_01339	0.48	+0.3
1,393,796	+		MPMX19_01339	0.48	+0.2
1,393,852	+		MPMX19_01339	0.53	-2.0
1,393,852	+		MPMX19_01339	0.53	-1.8
1,393,852	+		MPMX19_01339	0.53	+0.6
1,393,852	+		MPMX19_01339	0.53	-1.5
1,393,852	+		MPMX19_01339	0.53	+2.0
1,393,852	+		MPMX19_01339	0.53	+0.4
1,393,852	+		MPMX19_01339	0.53	+1.6
1,393,852	+		MPMX19_01339	0.53	-1.5
1,393,852	+		MPMX19_01339	0.53	-2.0
1,393,852	+		MPMX19_01339	0.53	+0.4
1,393,852	+		MPMX19_01339	0.53	-0.4
1,393,852	+		MPMX19_01339	0.53	-0.6
1,393,852	+		MPMX19_01339	0.53	-2.4
1,393,852	+		MPMX19_01339	0.53	-0.6
1,393,852	+		MPMX19_01339	0.53	-2.1
1,393,852	+		MPMX19_01339	0.53	-0.8
1,393,852	+		MPMX19_01339	0.53	-0.5
1,393,852	+		MPMX19_01339	0.53	-0.5
1,393,852	+		MPMX19_01339	0.53	+0.3
1,393,852	+		MPMX19_01339	0.53	-1.4
1,393,852	+		MPMX19_01339	0.53	+1.0
1,393,852	+		MPMX19_01339	0.53	-0.0
1,393,852	+		MPMX19_01339	0.53	-0.5
1,393,852	+		MPMX19_01339	0.53	-0.7
1,393,852	+		MPMX19_01339	0.53	-0.4
1,393,852	+		MPMX19_01339	0.53	-2.8
1,393,852	+		MPMX19_01339	0.53	-1.2
1,393,852	+		MPMX19_01339	0.53	+0.3
1,393,852	+		MPMX19_01339	0.53	-1.8
1,393,852	+		MPMX19_01339	0.53	+0.6
1,393,972	+		MPMX19_01339	0.63	-1.0
1,393,972	+		MPMX19_01339	0.63	-1.0
1,393,972	+		MPMX19_01339	0.63	-1.1
1,393,972	+		MPMX19_01339	0.63	-0.2
1,393,972	+		MPMX19_01339	0.63	-2.5
1,393,972	+		MPMX19_01339	0.63	+0.7
1,393,972	+		MPMX19_01339	0.63	-3.0
1,393,972	+		MPMX19_01339	0.63	-0.2
1,393,972	+		MPMX19_01339	0.63	-1.1
1,393,972	+		MPMX19_01339	0.63	-0.7
1,393,972	+		MPMX19_01339	0.63	+0.4
1,393,972	+		MPMX19_01339	0.63	-0.5
1,393,973	-		MPMX19_01339	0.63	-1.4
1,393,973	-		MPMX19_01339	0.63	-1.2
1,393,973	-		MPMX19_01339	0.63	-1.7
1,394,233	+		MPMX19_01339	0.85	+1.0
1,394,233	+		MPMX19_01339	0.85	-0.5
1,394,233	+		MPMX19_01339	0.85	+0.2
1,394,233	+		MPMX19_01339	0.85	-0.2
1,394,233	+		MPMX19_01339	0.85	-0.2
1,394,233	+		MPMX19_01339	0.85	-0.7
1,394,234	-		MPMX19_01339	0.85	-0.6
1,394,234	-		MPMX19_01339	0.85	-2.5
1,394,845	+				-1.2
1,394,846	-				-0.9
1,394,846	-				+0.1
1,394,846	-				-0.7
1,394,969	-				-0.1
1,394,970	+				+0.6
1,394,970	+				-0.6
1,394,970	+				-0.1
1,394,970	+				+0.0
1,394,971	-				+0.1
1,394,971	-				-0.4
1,394,971	-				+2.2
1,394,989	-				-0.5
1,395,000	+				-0.6
1,395,000	+				-0.6
1,395,000	+				-1.2
1,395,000	+				-0.4
1,395,001	-				-0.1
1,395,001	-				-0.9
1,395,001	-				+0.1
1,395,001	-				-1.2
1,395,001	-				-0.2
1,395,001	-				-2.8
1,395,001	-				-0.9
1,395,001	-				-0.7
1,395,001	-				+2.1
1,395,001	-				-1.7
1,395,002	+				+0.5
1,395,002	+				-0.5
1,395,003	-				-0.2
1,395,003	-				+0.8
1,395,003	-				-0.9
1,395,003	-				-1.8
1,395,003	-				-0.9
1,395,003	-				-1.4
1,395,003	-				+1.6
1,395,038	-				-1.6
1,395,147	+				-0.9
1,395,219	+				-0.5
1,395,219	+				-0.6
1,395,220	-				-1.1
1,395,324	+				-0.7
1,395,354	+				-3.1
1,395,354	+				-1.2
1,395,354	+				-0.2
1,395,355	-				-0.6
1,395,355	-				-0.2
1,395,355	-				-0.5
1,395,355	-				+1.2
1,395,365	+				+0.1
1,395,365	+				-0.6
1,395,396	+				-1.9
1,395,397	-				-0.2
1,395,397	-				-0.9
1,395,408	-				-1.1