Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01182

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,222,826	+		MPMX19_01181	0.55	-0.1
1,222,826	+		MPMX19_01181	0.55	+1.4
1,222,826	+		MPMX19_01181	0.55	-0.5
1,222,826	+		MPMX19_01181	0.55	+1.8
1,222,826	+		MPMX19_01181	0.55	-0.4
1,222,826	+		MPMX19_01181	0.55	+0.6
1,222,826	+		MPMX19_01181	0.55	+0.9
1,222,826	+		MPMX19_01181	0.55	+0.5
1,222,826	+		MPMX19_01181	0.55	-0.6
1,222,826	+		MPMX19_01181	0.55	+0.2
1,222,826	+		MPMX19_01181	0.55	+0.0
1,222,826	+		MPMX19_01181	0.55	-1.5
1,222,826	+		MPMX19_01181	0.55	+0.0
1,222,826	+		MPMX19_01181	0.55	+0.3
1,222,826	+		MPMX19_01181	0.55	-0.8
1,222,826	+		MPMX19_01181	0.55	+0.7
1,222,826	+		MPMX19_01181	0.55	-1.0
1,222,826	+		MPMX19_01181	0.55	+0.7
1,222,826	+		MPMX19_01181	0.55	+0.8
1,222,826	+		MPMX19_01181	0.55	-0.4
1,222,826	+		MPMX19_01181	0.55	+0.2
1,222,827	-		MPMX19_01181	0.55	-0.0
1,222,827	-		MPMX19_01181	0.55	-1.0
1,222,827	-		MPMX19_01181	0.55	+0.3
1,222,827	-		MPMX19_01181	0.55	+0.7
1,222,827	-		MPMX19_01181	0.55	+0.1
1,222,827	-		MPMX19_01181	0.55	+0.6
1,222,827	-		MPMX19_01181	0.55	-0.2
1,222,827	-		MPMX19_01181	0.55	+0.8
1,222,827	-		MPMX19_01181	0.55	-0.4
1,222,827	-		MPMX19_01181	0.55	-0.5
1,222,827	-		MPMX19_01181	0.55	+0.5
1,222,827	-		MPMX19_01181	0.55	+0.3
1,222,827	-		MPMX19_01181	0.55	+0.2
1,222,827	-		MPMX19_01181	0.55	+0.8
1,222,827	-		MPMX19_01181	0.55	-0.7
1,222,827	-		MPMX19_01181	0.55	-0.0
1,222,827	-		MPMX19_01181	0.55	+0.0
1,222,827	-		MPMX19_01181	0.55	-0.4
1,222,827	-		MPMX19_01181	0.55	-0.4
1,222,827	-		MPMX19_01181	0.55	-0.7
1,222,827	-		MPMX19_01181	0.55	-0.7
1,222,827	-		MPMX19_01181	0.55	+1.6
1,222,827	-		MPMX19_01181	0.55	+0.3
1,222,827	-		MPMX19_01181	0.55	-0.7
1,222,827	-		MPMX19_01181	0.55	-0.5
1,222,827	-		MPMX19_01181	0.55	-1.5
1,222,827	-		MPMX19_01181	0.55	+0.1
1,222,848	+		MPMX19_01181	0.57	-0.1
1,222,848	+		MPMX19_01181	0.57	-0.2
1,222,848	+		MPMX19_01181	0.57	+0.5
1,222,848	+		MPMX19_01181	0.57	-0.1
1,222,848	+		MPMX19_01181	0.57	-0.6
1,222,848	+		MPMX19_01181	0.57	-1.2
1,222,848	+		MPMX19_01181	0.57	-1.0
1,222,849	-		MPMX19_01181	0.57	-0.2
1,222,849	-		MPMX19_01181	0.57	+0.4
1,222,849	-		MPMX19_01181	0.57	-0.7
1,222,849	-		MPMX19_01181	0.57	+0.5
1,222,849	-		MPMX19_01181	0.57	-0.7
1,222,937	-		MPMX19_01181	0.62	-0.0
1,223,681	+				-1.7
1,223,682	-				-0.7
1,223,744	+				-0.4
1,223,744	+				-1.9
1,223,745	-				+0.4
1,223,745	-				+0.6
1,223,851	+		MPMX19_01182	0.11	-1.3
1,223,851	+		MPMX19_01182	0.11	+0.3
1,223,851	+		MPMX19_01182	0.11	-1.0
1,223,851	+		MPMX19_01182	0.11	-1.0
1,223,852	-		MPMX19_01182	0.12	-1.0
1,223,852	-		MPMX19_01182	0.12	-1.4
1,223,852	-		MPMX19_01182	0.12	-0.3
1,223,852	-		MPMX19_01182	0.12	-1.6
1,223,852	-		MPMX19_01182	0.12	-1.1
1,223,852	-		MPMX19_01182	0.12	-0.3
1,223,900	+		MPMX19_01182	0.20	-0.4
1,223,900	+		MPMX19_01182	0.20	-1.4
1,223,900	+		MPMX19_01182	0.20	-0.7
1,223,900	+		MPMX19_01182	0.20	-2.0
1,223,900	+		MPMX19_01182	0.20	+0.8
1,223,900	+		MPMX19_01182	0.20	+0.0
1,223,900	+		MPMX19_01182	0.20	-0.8
1,223,900	+		MPMX19_01182	0.20	-0.1
1,223,901	-		MPMX19_01182	0.20	-0.8
1,223,901	-		MPMX19_01182	0.20	-0.8
1,223,901	-		MPMX19_01182	0.20	-1.0
1,223,901	-		MPMX19_01182	0.20	-1.0
1,223,901	-		MPMX19_01182	0.20	-0.6
1,223,901	-		MPMX19_01182	0.20	-1.4
1,223,901	-		MPMX19_01182	0.20	-1.0
1,223,901	-		MPMX19_01182	0.20	-0.2
1,223,901	-		MPMX19_01182	0.20	+0.1
1,223,901	-		MPMX19_01182	0.20	+0.3
1,223,901	-		MPMX19_01182	0.20	-1.7
1,223,901	-		MPMX19_01182	0.20	-0.7
1,223,901	-		MPMX19_01182	0.20	+0.4
1,223,901	-		MPMX19_01182	0.20	-1.4
1,223,901	-		MPMX19_01182	0.20	-1.8
1,223,999	+		MPMX19_01182	0.37	-0.7
1,223,999	+		MPMX19_01182	0.37	-0.7
1,223,999	+		MPMX19_01182	0.37	-0.5
1,223,999	+		MPMX19_01182	0.37	-1.2
1,223,999	+		MPMX19_01182	0.37	+0.5
1,223,999	+		MPMX19_01182	0.37	+1.0
1,223,999	+		MPMX19_01182	0.37	+0.9
1,223,999	+		MPMX19_01182	0.37	-0.2
1,223,999	+		MPMX19_01182	0.37	-0.6
1,223,999	+		MPMX19_01182	0.37	+0.3
1,223,999	+		MPMX19_01182	0.37	-0.9
1,223,999	+		MPMX19_01182	0.37	+0.8
1,224,000	-		MPMX19_01182	0.38	+0.8
1,224,000	-		MPMX19_01182	0.38	-0.5
1,224,000	-		MPMX19_01182	0.38	-0.5
1,224,000	-		MPMX19_01182	0.38	-0.2
1,224,000	-		MPMX19_01182	0.38	-0.2
1,224,000	-		MPMX19_01182	0.38	-1.0
1,224,000	-		MPMX19_01182	0.38	-0.4
1,224,158	+		MPMX19_01182	0.65	-1.3
1,224,158	+		MPMX19_01182	0.65	-0.4
1,224,158	+		MPMX19_01182	0.65	-0.7
1,224,158	+		MPMX19_01182	0.65	+0.8
1,224,158	+		MPMX19_01182	0.65	-0.2
1,224,158	+		MPMX19_01182	0.65	+0.3
1,224,158	+		MPMX19_01182	0.65	+2.4
1,224,158	+		MPMX19_01182	0.65	-3.5
1,224,158	+		MPMX19_01182	0.65	-0.7
1,224,158	+		MPMX19_01182	0.65	-1.3
1,224,158	+		MPMX19_01182	0.65	-1.2
1,224,158	+		MPMX19_01182	0.65	-1.8
1,224,158	+		MPMX19_01182	0.65	-2.3
1,224,158	+		MPMX19_01182	0.65	-0.8
1,224,158	+		MPMX19_01182	0.65	-1.0
1,224,158	+		MPMX19_01182	0.65	-0.6
1,224,158	+		MPMX19_01182	0.65	+1.6
1,224,158	+		MPMX19_01182	0.65	-2.1
1,224,158	+		MPMX19_01182	0.65	+1.0
1,224,158	+		MPMX19_01182	0.65	-1.5
1,224,158	+		MPMX19_01182	0.65	-1.4
1,224,158	+		MPMX19_01182	0.65	+0.0
1,224,158	+		MPMX19_01182	0.65	-0.5
1,224,158	+		MPMX19_01182	0.65	-0.5
1,224,159	-		MPMX19_01182	0.65	+0.9
1,224,159	-		MPMX19_01182	0.65	-1.0
1,224,159	-		MPMX19_01182	0.65	-2.0
1,224,159	-		MPMX19_01182	0.65	+0.9
1,224,159	-		MPMX19_01182	0.65	-1.2
1,224,159	-		MPMX19_01182	0.65	-0.3
1,224,159	-		MPMX19_01182	0.65	-0.1
1,224,159	-		MPMX19_01182	0.65	+0.3
1,224,159	-		MPMX19_01182	0.65	-0.1
1,224,159	-		MPMX19_01182	0.65	+0.6
1,224,159	-		MPMX19_01182	0.65	-0.4
1,224,159	-		MPMX19_01182	0.65	-1.5
1,224,159	-		MPMX19_01182	0.65	-1.5
1,224,159	-		MPMX19_01182	0.65	-1.4
1,224,159	-		MPMX19_01182	0.65	+0.0
1,224,159	-		MPMX19_01182	0.65	-1.2
1,224,159	-		MPMX19_01182	0.65	-1.4
1,224,159	-		MPMX19_01182	0.65	-0.7
1,224,159	-		MPMX19_01182	0.65	-2.0
1,224,159	-		MPMX19_01182	0.65	-2.4
1,224,159	-		MPMX19_01182	0.65	+0.8
1,224,159	-		MPMX19_01182	0.65	-0.5
1,224,159	-		MPMX19_01182	0.65	-0.3
1,224,159	-		MPMX19_01182	0.65	+0.1
1,224,159	-		MPMX19_01182	0.65	-0.7
1,224,163	+		MPMX19_01182	0.66	-1.4
1,224,221	+		MPMX19_01182	0.76	-0.6
1,224,221	+		MPMX19_01182	0.76	+0.2
1,224,221	+		MPMX19_01182	0.76	+0.2
1,224,221	+		MPMX19_01182	0.76	+0.0
1,224,222	-		MPMX19_01182	0.76	-0.1
1,224,222	-		MPMX19_01182	0.76	+0.1
1,224,222	-		MPMX19_01182	0.76	-1.6
1,224,222	-		MPMX19_01182	0.76	-1.5
1,224,222	-		MPMX19_01182	0.76	-0.7
1,224,353	+				+0.1
1,224,353	+				-1.0
1,224,353	+				+0.6
1,224,353	+				-1.8
1,224,354	-				-0.7
1,224,354	-				+0.2
1,224,354	-				+0.9
1,224,354	-				+0.3
1,224,354	-				-0.3
1,224,354	-				-0.8
1,224,628	+				+0.5
1,224,629	-				-0.8
1,224,629	-				-0.3
1,224,648	+				-1.8
1,224,648	+				-0.5
1,224,648	+				-0.4
1,224,648	+				-0.2
1,224,648	+				+0.5
1,224,648	+				-0.2
1,224,648	+				+0.8
1,224,648	+				-1.1
1,224,648	+				-0.4
1,224,648	+				+0.5
1,224,648	+				+0.1
1,224,648	+				-1.8
1,224,648	+				-0.3
1,224,648	+				-0.7
1,224,648	+				-1.7
1,224,648	+				+1.2
1,224,648	+				+0.9
1,224,648	+				-0.0
1,224,648	+				+0.9
1,224,648	+				-0.8
1,224,648	+				-0.2
1,224,648	+				-0.6
1,224,648	+				-0.3
1,224,648	+				-0.8
1,224,648	+				+0.1
1,224,648	+				-1.5
1,224,648	+				-0.5
1,224,648	+				-0.9
1,224,648	+				-1.0
1,224,648	+				-0.1
1,224,648	+				-1.5
1,224,648	+				+1.5
1,224,648	+				+0.8
1,224,648	+				+0.0
1,224,648	+				-0.5
1,224,649	-				-0.5
1,224,649	-				-0.2
1,224,649	-				-1.2
1,224,649	-				-0.7
1,224,649	-				+0.0
1,224,649	-				-0.5
1,224,649	-				+1.2
1,224,649	-				-0.3
1,224,649	-				-0.6
1,224,649	-				-0.1
1,224,649	-				-0.4
1,224,649	-				-0.0
1,224,649	-				-0.5
1,224,649	-				-0.1
1,224,649	-				-0.1
1,224,649	-				+1.3
1,224,649	-				-0.2
1,224,649	-				-0.5
1,224,649	-				-0.8
1,224,649	-				-0.6
1,224,649	-				+1.0
1,224,649	-				-0.6
1,224,649	-				-0.2
1,224,649	-				-0.3
1,224,649	-				-1.1
1,224,649	-				-0.3
1,224,649	-				-1.5
1,224,649	-				+0.3
1,224,649	-				-1.1
1,224,649	-				-0.3
1,224,649	-				-0.9
1,224,669	+				-1.0
1,224,669	+				+0.4
1,224,669	+				+0.6
1,224,669	+				-0.1
1,224,669	+				+0.6
1,224,670	-				-1.0
1,224,670	-				+0.5
1,224,670	-				-0.3
1,224,670	-				-0.7
1,224,670	-				-0.2
1,224,670	-				+0.5
1,224,670	-				-1.1
1,224,670	-				-1.4
1,224,670	-				-0.2
1,224,670	-				+0.7
1,224,670	-				+0.6
1,224,708	+				+1.9
1,224,708	+				-0.0
1,224,708	+				+0.8
1,224,708	+				-0.6
1,224,708	+				+1.4
1,224,708	+				+0.5
1,224,708	+				+1.6
1,224,709	-		MPMX19_01183	0.10	-0.4
1,224,709	-		MPMX19_01183	0.10	-0.8
1,224,709	-		MPMX19_01183	0.10	-1.4
1,224,709	-		MPMX19_01183	0.10	-1.5
1,224,709	-		MPMX19_01183	0.10	+0.8
1,224,709	-		MPMX19_01183	0.10	-0.4
1,224,726	+		MPMX19_01183	0.11	+0.6
1,224,726	+		MPMX19_01183	0.11	-0.5
1,224,726	+		MPMX19_01183	0.11	-0.1
1,224,726	+		MPMX19_01183	0.11	+0.3
1,224,727	-		MPMX19_01183	0.11	-0.8
1,224,727	-		MPMX19_01183	0.11	-0.5
1,224,727	-		MPMX19_01183	0.11	-0.5
1,224,727	-		MPMX19_01183	0.11	-0.3
1,224,954	+		MPMX19_01183	0.19	+0.6
1,224,954	+		MPMX19_01183	0.19	-1.2
1,224,954	+		MPMX19_01183	0.19	+1.2
1,224,954	+		MPMX19_01183	0.19	+0.0
1,224,954	+		MPMX19_01183	0.19	-0.1
1,224,954	+		MPMX19_01183	0.19	-0.8
1,224,954	+		MPMX19_01183	0.19	+0.6
1,224,954	+		MPMX19_01183	0.19	-0.2
1,224,954	+		MPMX19_01183	0.19	+0.4
1,224,954	+		MPMX19_01183	0.19	+0.2
1,224,954	+		MPMX19_01183	0.19	+0.2
1,224,954	+		MPMX19_01183	0.19	+0.6
1,224,955	-		MPMX19_01183	0.19	+0.9
1,224,955	-		MPMX19_01183	0.19	+1.0
1,224,955	-		MPMX19_01183	0.19	-1.0
1,224,955	-		MPMX19_01183	0.19	-0.9
1,224,955	-		MPMX19_01183	0.19	+0.8
1,224,955	-		MPMX19_01183	0.19	+0.6
1,224,955	-		MPMX19_01183	0.19	+0.2
1,224,955	-		MPMX19_01183	0.19	-0.1
1,224,955	-		MPMX19_01183	0.19	-0.2
1,224,955	-		MPMX19_01183	0.19	-0.7
1,224,955	-		MPMX19_01183	0.19	-0.2
1,224,955	-		MPMX19_01183	0.19	-0.9
1,224,955	-		MPMX19_01183	0.19	+1.6
1,224,955	-		MPMX19_01183	0.19	+0.0
1,224,955	-		MPMX19_01183	0.19	+0.0
1,224,996	+		MPMX19_01183	0.21	-1.5
1,224,996	+		MPMX19_01183	0.21	+1.3
1,224,996	+		MPMX19_01183	0.21	-1.0
1,224,996	+		MPMX19_01183	0.21	-1.4
1,224,996	+		MPMX19_01183	0.21	-0.5
1,224,997	-		MPMX19_01183	0.21	+0.4
1,224,997	-		MPMX19_01183	0.21	-0.6
1,224,997	-		MPMX19_01183	0.21	-1.1
1,224,997	-		MPMX19_01183	0.21	-2.1
1,224,997	-		MPMX19_01183	0.21	-0.4
1,224,997	-		MPMX19_01183	0.21	+0.1
1,224,997	-		MPMX19_01183	0.21	-0.5
1,224,997	-		MPMX19_01183	0.21	+1.2
1,224,997	-		MPMX19_01183	0.21	+0.6
1,224,997	-		MPMX19_01183	0.21	-1.1
1,224,997	-		MPMX19_01183	0.21	-0.1
1,225,182	+		MPMX19_01183	0.28	+0.5
1,225,182	+		MPMX19_01183	0.28	-1.7
1,225,182	+		MPMX19_01183	0.28	+0.4
1,225,182	+		MPMX19_01183	0.28	+0.5
1,225,185	+		MPMX19_01183	0.28	-1.5
1,225,185	+		MPMX19_01183	0.28	+0.1
1,225,185	+		MPMX19_01183	0.28	-1.0
1,225,185	+		MPMX19_01183	0.28	+1.0
1,225,185	+		MPMX19_01183	0.28	+0.1
1,225,185	+		MPMX19_01183	0.28	+0.3
1,225,185	+		MPMX19_01183	0.28	+1.3
1,225,185	+		MPMX19_01183	0.28	+0.6
1,225,185	+		MPMX19_01183	0.28	+1.9
1,225,185	+		MPMX19_01183	0.28	-1.7
1,225,185	+		MPMX19_01183	0.28	+1.1
1,225,185	+		MPMX19_01183	0.28	-1.0
1,225,185	+		MPMX19_01183	0.28	-0.4
1,225,186	-		MPMX19_01183	0.28	+0.2
1,225,186	-		MPMX19_01183	0.28	-0.2
1,225,186	-		MPMX19_01183	0.28	-2.0
1,225,186	-		MPMX19_01183	0.28	-0.2
1,225,186	-		MPMX19_01183	0.28	+1.0
1,225,233	+		MPMX19_01183	0.30	+0.3
1,225,233	+		MPMX19_01183	0.30	+0.8
1,225,233	+		MPMX19_01183	0.30	-0.9
1,225,233	+		MPMX19_01183	0.30	+0.5
1,225,233	+		MPMX19_01183	0.30	-1.5
1,225,233	+		MPMX19_01183	0.30	+0.3
1,225,233	+		MPMX19_01183	0.30	-0.4
1,225,233	+		MPMX19_01183	0.30	-0.4
1,225,233	+		MPMX19_01183	0.30	-0.3
1,225,233	+		MPMX19_01183	0.30	-0.2
1,225,233	+		MPMX19_01183	0.30	+0.6
1,225,233	+		MPMX19_01183	0.30	-1.8
1,225,233	+		MPMX19_01183	0.30	-0.3
1,225,233	+		MPMX19_01183	0.30	+0.0
1,225,234	-		MPMX19_01183	0.30	-1.3
1,225,234	-		MPMX19_01183	0.30	-0.5
1,225,234	-		MPMX19_01183	0.30	-0.1
1,225,234	-		MPMX19_01183	0.30	-0.7
1,225,234	-		MPMX19_01183	0.30	-1.0
1,225,234	-		MPMX19_01183	0.30	+0.4
1,225,234	-		MPMX19_01183	0.30	+0.0
1,225,234	-		MPMX19_01183	0.30	-0.7
1,225,234	-		MPMX19_01183	0.30	-0.6
1,225,234	-		MPMX19_01183	0.30	+0.4
1,225,234	-		MPMX19_01183	0.30	-1.5
1,225,234	-		MPMX19_01183	0.30	-0.7
1,225,234	-		MPMX19_01183	0.30	+0.9
1,225,234	-		MPMX19_01183	0.30	-2.0
1,225,234	-		MPMX19_01183	0.30	+0.6
1,225,234	-		MPMX19_01183	0.30	-0.0
1,225,234	-		MPMX19_01183	0.30	+0.6
1,225,234	-		MPMX19_01183	0.30	+0.3
1,225,234	-		MPMX19_01183	0.30	+0.8
1,225,234	-		MPMX19_01183	0.30	-0.6
1,225,234	-		MPMX19_01183	0.30	-1.4
1,225,234	-		MPMX19_01183	0.30	+0.4
1,225,234	-		MPMX19_01183	0.30	+0.0
1,225,234	-		MPMX19_01183	0.30	-0.5
1,225,234	-		MPMX19_01183	0.30	-0.7
1,225,234	-		MPMX19_01183	0.30	-0.5
1,225,234	-		MPMX19_01183	0.30	-1.3
1,225,234	-		MPMX19_01183	0.30	-1.0
1,225,278	+		MPMX19_01183	0.31	+0.8
1,225,278	+		MPMX19_01183	0.31	-1.5
1,225,279	-		MPMX19_01183	0.31	-0.1
1,225,279	-		MPMX19_01183	0.31	+0.4
1,225,279	-		MPMX19_01183	0.31	+2.1
1,225,279	-		MPMX19_01183	0.31	-1.4
1,225,279	-		MPMX19_01183	0.31	-0.4
1,225,279	-		MPMX19_01183	0.31	-0.2