Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11095

Experiment: Experiment:TE, Cucumber 5 Main Stem Xylem (TE-S-C5-SX)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Main Stem Xylem (TE-S-C5-SX)
2,123,655	+				+2.6
2,123,658	-				+1.5
2,123,658	-				-0.5
2,123,658	-				+1.9
2,123,658	-				+0.5
2,123,697	+				-1.8
2,123,764	+				+0.6
2,123,764	+				+0.2
2,123,764	+				-0.2
2,123,764	+				+0.2
2,123,765	-				-2.2
2,123,767	-				-1.2
2,123,767	-				-0.4
2,123,799	-				+0.2
2,123,869	-				+2.1
2,123,879	-				+0.6
2,124,173	-				-0.0
2,124,222	+				-1.0
2,124,223	-				+1.5
2,124,226	+				-0.4
2,124,226	+				-0.8
2,124,226	+				+0.3
2,124,226	+				+0.0
2,124,227	-				+0.7
2,124,266	-				-0.7
2,124,267	+				+0.9
2,124,268	-				+0.2
2,124,268	-				+0.2
2,124,268	-				-0.9
2,124,268	-				-1.0
2,124,268	-				-0.0
2,124,268	-				-0.7
2,124,306	+				-1.4
2,124,306	+				+0.6
2,124,307	-				+1.9
2,124,307	-				-3.5
2,124,417	-		LU632_RS11095	0.51	-2.2
2,124,417	-		LU632_RS11095	0.51	-1.2
2,124,503	+				-1.4
2,124,539	+				+1.7
2,124,540	-				+0.0
2,124,900	+		LU632_RS11100	0.39	+1.0
2,125,444	+				+1.1
2,125,487	-				+1.6
2,125,497	+				-0.7