Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22665

Experiment: Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)
4,316,944	-				-2.1
4,317,003	+		LU632_RS22665	0.13	-3.0
4,317,014	+		LU632_RS22665	0.15	-1.9
4,317,066	+		LU632_RS22665	0.28	+1.6
4,317,241	+		LU632_RS22665	0.70	-0.7
4,317,241	+		LU632_RS22665	0.70	-1.6
4,317,241	+		LU632_RS22665	0.70	-0.6
4,317,242	-		LU632_RS22665	0.71	-1.6
4,317,242	-		LU632_RS22665	0.71	+0.1
4,317,292	-		LU632_RS22665	0.83	+0.9
4,317,293	+		LU632_RS22665	0.83	+1.4
4,317,369	-				-0.3
4,317,370	+				+1.8
4,317,370	+				+0.7
4,317,443	+		LU632_RS22670	0.14	-0.3
4,317,525	+		LU632_RS22670	0.27	-0.0
4,317,526	-		LU632_RS22670	0.28	-0.6
4,317,534	+		LU632_RS22670	0.29	-1.9
4,317,609	+		LU632_RS22670	0.41	-0.3
4,317,622	+		LU632_RS22670	0.43	+0.0
4,317,671	+		LU632_RS22670	0.52	-2.4
4,317,786	+		LU632_RS22670	0.71	+2.6
4,317,786	+		LU632_RS22670	0.71	+0.4
4,317,829	-		LU632_RS22670	0.78	-0.8
4,317,829	-		LU632_RS22670	0.78	+1.4
4,317,830	+		LU632_RS22670	0.78	-0.6
4,317,851	+		LU632_RS22670	0.81	-1.5
4,317,851	+		LU632_RS22670	0.81	+0.6
4,317,852	-		LU632_RS22670	0.82	+0.7
4,317,852	-		LU632_RS22670	0.82	-0.9
4,317,852	-		LU632_RS22670	0.82	-2.1
4,317,852	-		LU632_RS22670	0.82	+0.5
4,317,883	-		LU632_RS22670	0.87	+2.1
4,317,895	+		LU632_RS22670	0.89	-0.6
4,317,895	+		LU632_RS22670	0.89	+0.9
4,317,895	+		LU632_RS22670	0.89	-0.4
4,317,917	+				-2.2
4,318,015	-				-0.3
4,318,078	+				+0.2
4,318,079	-				+0.4