Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17350

Experiment: Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)
3,261,415	-				-0.6
3,261,565	-				-0.5
3,261,565	-				+0.3
3,261,657	-				-0.2
3,261,705	-				-0.3
3,261,705	-				+0.2
3,261,705	-				+0.1
3,261,705	-				-0.4
3,261,705	-				-0.1
3,261,705	-				+1.1
3,261,727	-				+2.0
3,261,727	-				+0.5
3,261,787	-				+1.8
3,261,787	-				+1.1
3,261,794	-				-1.4
3,261,909	-		LU632_RS17350	0.19	-1.2
3,261,919	+		LU632_RS17350	0.20	-0.7
3,261,919	+		LU632_RS17350	0.20	-0.6
3,261,919	+		LU632_RS17350	0.20	+2.2
3,261,919	+		LU632_RS17350	0.20	-1.5
3,261,919	+		LU632_RS17350	0.20	+1.3
3,261,920	-		LU632_RS17350	0.20	-2.5
3,261,920	-		LU632_RS17350	0.20	+0.8
3,261,920	-		LU632_RS17350	0.20	+1.5
3,261,923	+		LU632_RS17350	0.21	-2.2
3,261,929	+		LU632_RS17350	0.22	+1.9
3,261,933	+		LU632_RS17350	0.22	-1.8
3,262,326	-		LU632_RS17350	0.86	+1.0
3,262,389	+				-0.7
3,262,394	+				-0.1
3,262,394	+				-0.8
3,262,412	-				+2.2