Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08350

Experiment: Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)
1,571,121	-		LU632_RS08345	0.74	-0.4
1,571,170	-		LU632_RS08345	0.76	-0.6
1,571,419	+		LU632_RS08345	0.89	+1.4
1,571,419	+		LU632_RS08345	0.89	-0.8
1,571,419	+		LU632_RS08345	0.89	+0.2
1,571,419	+		LU632_RS08345	0.89	-2.4
1,571,420	-		LU632_RS08345	0.89	+1.4
1,571,491	+				-2.8
1,571,492	-				-2.0
1,571,526	+				+0.1
1,571,623	+				+0.7
1,571,692	-				+1.8
1,571,701	-				+0.8
1,571,722	+				+0.3
1,571,813	-				+1.5
1,571,866	-				-0.8
1,571,913	-				-1.5
1,571,939	-				+0.2
1,572,058	+		LU632_RS08350	0.45	-0.5
1,572,059	-		LU632_RS08350	0.46	+0.9
1,572,090	-		LU632_RS08350	0.62	-1.8
1,572,091	+		LU632_RS08350	0.62	+0.1
1,572,092	-		LU632_RS08350	0.63	-3.0
1,572,161	+				+1.4