Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04710

Experiment: Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)
923,083	+				+0.7
923,084	-				-1.2
923,085	+				-1.8
923,086	-				+1.0
923,087	+				+1.2
923,088	-				+0.7
923,088	-				+1.7
923,088	-				-2.0
923,088	-				-2.3
923,088	-				+2.3
923,117	-				+2.4
923,907	-		LU632_RS04710	0.55	-1.9
924,491	-				-0.4
924,491	-				-1.9
924,491	-				+0.2
924,516	-				+0.2
924,516	-				+0.1
924,568	+				-0.1
924,569	-				+1.7
924,590	+				+1.3
924,591	-				-0.4
924,591	-				+1.6
924,597	+				+0.6
924,598	-				+1.9
924,599	+				+0.3
924,600	-				-0.8
924,601	+				-1.2
924,602	-				-0.8
924,629	+				-1.2
924,630	-				+0.1
924,665	+				-3.6
924,666	-				-2.0
924,666	-				+0.4
924,672	+				-2.2
924,673	-				+0.6
924,674	+				+0.8
924,674	+				-1.2
924,675	-				-0.7
924,675	-				-1.7
924,689	+				-0.6
924,708	+				+0.1
924,728	+				-0.1
924,752	-				-1.0
924,854	-		LU632_RS04715	0.19	+0.2
924,854	-		LU632_RS04715	0.19	-0.3
924,958	+		LU632_RS04715	0.32	-0.3
924,959	-		LU632_RS04715	0.32	-0.8
924,963	-		LU632_RS04715	0.33	+0.3
925,119	+		LU632_RS04715	0.53	+2.6
925,119	-		LU632_RS04715	0.53	-0.2
925,120	-		LU632_RS04715	0.53	+1.5
925,142	-		LU632_RS04715	0.56	+0.2
925,338	-		LU632_RS04715	0.82	-0.1