Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04380

Experiment: Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)
865,942	-		LU632_RS04380	0.23	-2.5
866,075	-		LU632_RS04380	0.47	+0.0
866,075	-		LU632_RS04380	0.47	+0.6
866,075	-		LU632_RS04380	0.47	-0.8
866,134	+		LU632_RS04380	0.57	-0.6
866,210	+		LU632_RS04380	0.71	-1.5
866,211	-		LU632_RS04380	0.71	-2.9
866,392	-				-2.3
866,425	+				-2.0
866,427	+				-2.3
866,473	-				-1.2
866,473	-				-0.1
866,478	-				+0.1
866,478	-				+0.8
866,480	-				-2.5
866,517	+				+1.9
866,517	+				+0.7
866,517	+				+1.3
866,519	+				-1.1
866,519	+				+0.3
866,519	+				+0.6
866,575	+				+0.6
866,576	-				+1.3
866,582	+				-2.6
866,582	+				-3.3
866,834	+				+0.2
866,935	+				-0.8
866,935	+				-0.4
866,960	+				+0.8
866,961	-				-1.4
866,961	-				-1.9
866,965	-				-0.1
866,970	+				+0.4
866,994	-				-0.6
867,046	-				+1.9
867,115	+				+1.0
867,115	+				+0.3
867,116	-				+1.2
867,154	-				+0.4
867,173	-				-0.6
867,202	+				+0.6
867,203	-				+0.6
867,203	-				+0.9
867,206	+				-1.0
867,207	-				-0.9
867,252	+		LU632_RS04385	0.18	+1.2
867,252	+		LU632_RS04385	0.18	-0.8
867,253	-		LU632_RS04385	0.18	+0.1
867,318	-		LU632_RS04385	0.32	+1.1