Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04035

Experiment: Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS)
805,782	+		LU632_RS04030	0.50	-0.1
805,796	+		LU632_RS04030	0.55	+0.3
805,797	-		LU632_RS04030	0.55	-0.6
805,808	+		LU632_RS04030	0.59	+1.5
805,813	-		LU632_RS04030	0.61	+1.9
805,813	-		LU632_RS04030	0.61	-0.2
805,813	-		LU632_RS04030	0.61	-3.4
805,815	-		LU632_RS04030	0.61	-0.3
805,894	+		LU632_RS04030	0.89	+2.6
805,970	+				-1.1
805,970	+				-1.8
805,970	+				-1.1
805,971	-				+2.6
806,196	-				-1.3
806,239	-				-0.3
806,239	-				-1.5
806,273	-				-0.1
806,276	-				-0.5
806,280	+				-0.7
806,291	+				+1.7
806,345	+				+0.6
806,346	-				-1.1
806,372	-				+1.0
806,382	-				-0.1
806,382	-				-0.0
806,400	+				-2.7
806,472	-				-1.2
806,492	+				+0.5
806,493	-				-1.8
806,604	-				-0.9
806,630	-				-1.5
806,635	+				+0.4
806,692	+				+1.9
806,693	-				+1.1
806,693	-				-0.6
806,731	+				-1.6
806,731	+				-0.3
806,732	-				+2.1
806,732	-				-1.1
806,732	-				+0.8
806,760	+				-1.4
806,776	+				-0.3
806,809	+		LU632_RS04035	0.14	-2.2
806,810	-		LU632_RS04035	0.15	+0.5
806,810	-		LU632_RS04035	0.15	-2.8
806,818	-		LU632_RS04035	0.17	+0.3
806,849	+		LU632_RS04035	0.27	+1.5
806,887	+		LU632_RS04035	0.39	+0.0
806,887	+		LU632_RS04035	0.39	+0.7
806,887	+		LU632_RS04035	0.39	-0.8
806,888	-		LU632_RS04035	0.40	-4.0
807,073	+				+0.9
807,110	+				-0.5
807,111	-				+0.1
807,113	+				-1.7
807,114	-				-0.3
807,131	-				-1.8