Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03155 and OHPLBJKB_03156 are separated by 173 nucleotides OHPLBJKB_03156 and OHPLBJKB_03157 are separated by 2 nucleotides OHPLBJKB_03157 and OHPLBJKB_03158 are separated by 117 nucleotides OHPLBJKB_03158 and OHPLBJKB_03159 overlap by 4 nucleotides
OHPLBJKB_03155: OHPLBJKB_03155 - Cysteine--tRNA ligase, at 3,287,121 to 3,288,506
_03155
OHPLBJKB_03156: OHPLBJKB_03156 - Peptidyl-prolyl cis-trans isomerase B, at 3,288,680 to 3,289,174
_03156
OHPLBJKB_03157: OHPLBJKB_03157 - UDP-2,3-diacylglucosamine hydrolase, at 3,289,177 to 3,289,899
_03157
OHPLBJKB_03158: OHPLBJKB_03158 - N5-carboxyaminoimidazole ribonucleotide mutase, at 3,290,017 to 3,290,526
_03158
OHPLBJKB_03159: OHPLBJKB_03159 - N5-carboxyaminoimidazole ribonucleotide synthase, at 3,290,523 to 3,291,590
_03159
Position (kb)
3289
3290 Strain fitness (log2 ratio)
-2
-1
0
1 at 3288.548 kb on - strand at 3288.548 kb on - strand at 3288.548 kb on - strand at 3288.550 kb on - strand at 3288.550 kb on - strand at 3288.550 kb on - strand at 3288.550 kb on - strand at 3288.553 kb on - strand at 3288.553 kb on - strand at 3288.579 kb on + strand at 3288.579 kb on + strand at 3288.579 kb on + strand at 3288.580 kb on - strand at 3288.580 kb on - strand at 3288.580 kb on - strand at 3288.580 kb on - strand at 3288.613 kb on + strand at 3288.613 kb on + strand at 3288.613 kb on + strand at 3288.613 kb on + strand at 3288.615 kb on + strand at 3288.615 kb on + strand at 3288.626 kb on + strand at 3288.626 kb on + strand at 3288.626 kb on + strand at 3288.626 kb on + strand at 3288.626 kb on + strand at 3288.626 kb on + strand at 3288.626 kb on + strand at 3288.626 kb on + strand at 3288.626 kb on + strand at 3288.626 kb on + strand at 3288.626 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.628 kb on + strand at 3288.630 kb on + strand at 3288.630 kb on + strand at 3288.630 kb on + strand at 3288.630 kb on + strand at 3288.630 kb on + strand at 3288.630 kb on + strand at 3288.630 kb on + strand at 3289.962 kb on + strand at 3289.963 kb on - strand at 3290.009 kb on + strand at 3290.009 kb on + strand at 3290.079 kb on + strand, within OHPLBJKB_03158 at 3290.080 kb on - strand, within OHPLBJKB_03158 at 3290.214 kb on + strand, within OHPLBJKB_03158 at 3290.214 kb on + strand, within OHPLBJKB_03158 at 3290.330 kb on - strand, within OHPLBJKB_03158 at 3290.330 kb on - strand, within OHPLBJKB_03158 at 3290.340 kb on - strand, within OHPLBJKB_03158 at 3290.367 kb on + strand, within OHPLBJKB_03158 at 3290.382 kb on + strand, within OHPLBJKB_03158 at 3290.557 kb on + strand at 3290.565 kb on - strand at 3290.672 kb on - strand, within OHPLBJKB_03159 at 3290.672 kb on - strand, within OHPLBJKB_03159 at 3290.672 kb on - strand, within OHPLBJKB_03159 at 3290.672 kb on - strand, within OHPLBJKB_03159 at 3290.818 kb on + strand, within OHPLBJKB_03159 at 3290.819 kb on - strand, within OHPLBJKB_03159 at 3290.899 kb on - strand, within OHPLBJKB_03159
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 3,288,548 - -0.8 3,288,548 - +0.7 3,288,548 - +0.7 3,288,550 - -0.0 3,288,550 - +0.5 3,288,550 - -1.6 3,288,550 - +0.5 3,288,553 - +0.5 3,288,553 - -0.5 3,288,579 + +0.1 3,288,579 + +1.4 3,288,579 + -0.7 3,288,580 - -0.5 3,288,580 - +0.2 3,288,580 - -0.0 3,288,580 - +0.2 3,288,613 + +0.5 3,288,613 + +0.3 3,288,613 + -0.5 3,288,613 + +0.4 3,288,615 + +0.1 3,288,615 + +0.6 3,288,626 + +0.6 3,288,626 + +1.4 3,288,626 + -0.3 3,288,626 + -1.0 3,288,626 + -0.2 3,288,626 + -0.1 3,288,626 + -0.1 3,288,626 + +0.4 3,288,626 + -0.5 3,288,626 + +0.8 3,288,626 + -0.1 3,288,628 + +0.6 3,288,628 + +0.1 3,288,628 + +0.2 3,288,628 + -1.0 3,288,628 + -0.1 3,288,628 + -1.6 3,288,628 + +0.7 3,288,628 + +0.1 3,288,628 + +0.6 3,288,628 + +0.4 3,288,628 + -0.4 3,288,628 + -0.0 3,288,628 + -0.9 3,288,628 + -0.1 3,288,628 + -0.1 3,288,630 + -0.1 3,288,630 + +0.3 3,288,630 + +0.1 3,288,630 + +0.2 3,288,630 + -1.1 3,288,630 + +0.5 3,288,630 + -0.7 3,289,962 + +0.4 3,289,963 - -1.9 3,290,009 + +0.2 3,290,009 + -0.7 3,290,079 + OHPLBJKB_03158 0.12 -0.9 3,290,080 - OHPLBJKB_03158 0.12 +0.4 3,290,214 + OHPLBJKB_03158 0.39 -1.8 3,290,214 + OHPLBJKB_03158 0.39 +0.2 3,290,330 - OHPLBJKB_03158 0.61 -0.5 3,290,330 - OHPLBJKB_03158 0.61 -0.4 3,290,340 - OHPLBJKB_03158 0.63 +0.2 3,290,367 + OHPLBJKB_03158 0.69 -1.0 3,290,382 + OHPLBJKB_03158 0.72 -0.5 3,290,557 + -0.4 3,290,565 - -0.2 3,290,672 - OHPLBJKB_03159 0.14 -0.6 3,290,672 - OHPLBJKB_03159 0.14 -0.3 3,290,672 - OHPLBJKB_03159 0.14 -0.3 3,290,672 - OHPLBJKB_03159 0.14 -1.5 3,290,818 + OHPLBJKB_03159 0.28 -0.6 3,290,819 - OHPLBJKB_03159 0.28 -0.2 3,290,899 - OHPLBJKB_03159 0.35 -0.2
Or see this region's nucleotide sequence