Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02712 and OHPLBJKB_02713 are separated by 69 nucleotides OHPLBJKB_02713 and OHPLBJKB_02714 are separated by 255 nucleotides OHPLBJKB_02714 and OHPLBJKB_02715 overlap by 4 nucleotides
OHPLBJKB_02712: OHPLBJKB_02712 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, at 2,824,447 to 2,825,073
_02712
OHPLBJKB_02713: OHPLBJKB_02713 - Ribosome modulation factor, at 2,825,143 to 2,825,310
_02713
OHPLBJKB_02714: OHPLBJKB_02714 - hypothetical protein, at 2,825,566 to 2,826,129
_02714
OHPLBJKB_02715: OHPLBJKB_02715 - Paraquat-inducible protein B, at 2,826,126 to 2,827,766
_02715
Position (kb)
2825
2826
2827 Strain fitness (log2 ratio)
-1
0
1
2 at 2825.075 kb on + strand at 2825.153 kb on - strand at 2825.153 kb on - strand at 2825.153 kb on - strand at 2825.326 kb on + strand at 2825.380 kb on - strand at 2825.436 kb on - strand at 2825.466 kb on - strand at 2825.504 kb on - strand at 2825.547 kb on + strand at 2825.564 kb on - strand at 2825.582 kb on - strand at 2825.582 kb on - strand at 2825.596 kb on - strand at 2825.648 kb on + strand, within OHPLBJKB_02714 at 2825.918 kb on + strand, within OHPLBJKB_02714 at 2825.918 kb on + strand, within OHPLBJKB_02714 at 2825.963 kb on + strand, within OHPLBJKB_02714 at 2825.992 kb on + strand, within OHPLBJKB_02714 at 2826.046 kb on + strand, within OHPLBJKB_02714 at 2826.056 kb on + strand, within OHPLBJKB_02714 at 2826.056 kb on + strand, within OHPLBJKB_02714 at 2826.057 kb on - strand, within OHPLBJKB_02714 at 2826.177 kb on + strand at 2826.177 kb on + strand at 2826.255 kb on - strand at 2826.389 kb on + strand, within OHPLBJKB_02715 at 2826.564 kb on - strand, within OHPLBJKB_02715 at 2826.576 kb on - strand, within OHPLBJKB_02715 at 2826.594 kb on - strand, within OHPLBJKB_02715 at 2826.619 kb on + strand, within OHPLBJKB_02715 at 2826.619 kb on + strand, within OHPLBJKB_02715 at 2826.619 kb on + strand, within OHPLBJKB_02715 at 2826.620 kb on - strand, within OHPLBJKB_02715 at 2826.620 kb on - strand, within OHPLBJKB_02715 at 2826.620 kb on - strand, within OHPLBJKB_02715 at 2826.764 kb on + strand, within OHPLBJKB_02715 at 2826.780 kb on - strand, within OHPLBJKB_02715 at 2826.794 kb on + strand, within OHPLBJKB_02715 at 2826.840 kb on - strand, within OHPLBJKB_02715 at 2826.922 kb on + strand, within OHPLBJKB_02715
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,825,075 + -0.1 2,825,153 - -0.4 2,825,153 - -0.1 2,825,153 - +0.9 2,825,326 + -0.9 2,825,380 - +0.2 2,825,436 - +0.0 2,825,466 - -0.4 2,825,504 - -0.1 2,825,547 + -0.9 2,825,564 - -0.2 2,825,582 - +0.4 2,825,582 - -0.1 2,825,596 - +0.6 2,825,648 + OHPLBJKB_02714 0.15 -0.5 2,825,918 + OHPLBJKB_02714 0.62 -0.3 2,825,918 + OHPLBJKB_02714 0.62 +0.3 2,825,963 + OHPLBJKB_02714 0.70 +1.9 2,825,992 + OHPLBJKB_02714 0.76 -0.8 2,826,046 + OHPLBJKB_02714 0.85 -1.5 2,826,056 + OHPLBJKB_02714 0.87 +0.0 2,826,056 + OHPLBJKB_02714 0.87 -1.4 2,826,057 - OHPLBJKB_02714 0.87 +0.1 2,826,177 + -0.1 2,826,177 + -0.4 2,826,255 - +0.9 2,826,389 + OHPLBJKB_02715 0.16 +1.3 2,826,564 - OHPLBJKB_02715 0.27 -0.1 2,826,576 - OHPLBJKB_02715 0.27 +1.1 2,826,594 - OHPLBJKB_02715 0.29 -0.5 2,826,619 + OHPLBJKB_02715 0.30 -0.4 2,826,619 + OHPLBJKB_02715 0.30 +0.9 2,826,619 + OHPLBJKB_02715 0.30 -1.2 2,826,620 - OHPLBJKB_02715 0.30 -1.1 2,826,620 - OHPLBJKB_02715 0.30 +0.8 2,826,620 - OHPLBJKB_02715 0.30 -0.6 2,826,764 + OHPLBJKB_02715 0.39 -0.3 2,826,780 - OHPLBJKB_02715 0.40 -0.2 2,826,794 + OHPLBJKB_02715 0.41 +0.2 2,826,840 - OHPLBJKB_02715 0.44 -0.6 2,826,922 + OHPLBJKB_02715 0.49 +1.9
Or see this region's nucleotide sequence