Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00572 and OHPLBJKB_00573 are separated by 54 nucleotides OHPLBJKB_00573 and OHPLBJKB_00574 overlap by 1 nucleotides OHPLBJKB_00574 and OHPLBJKB_00575 are separated by 148 nucleotides
OHPLBJKB_00572: OHPLBJKB_00572 - Glucitol operon repressor, at 583,616 to 584,425
_00572
OHPLBJKB_00573: OHPLBJKB_00573 - Ribonuclease toxin YhaV, at 584,480 to 584,944
_00573
OHPLBJKB_00574: OHPLBJKB_00574 - Antitoxin PrlF, at 584,944 to 585,279
_00574
OHPLBJKB_00575: OHPLBJKB_00575 - Galactarate dehydratase (L-threo-forming), at 585,428 to 586,999
_00575
Position (kb) 584
585 Strain fitness (log2 ratio) -2
-1
0
1 at 583.518 kb on - strand at 583.518 kb on - strand at 583.518 kb on - strand at 583.558 kb on + strand at 583.559 kb on - strand at 583.613 kb on - strand at 583.613 kb on - strand at 583.613 kb on - strand at 583.615 kb on + strand at 583.615 kb on + strand at 583.616 kb on - strand at 583.622 kb on - strand at 583.736 kb on + strand, within OHPLBJKB_00572 at 583.736 kb on + strand, within OHPLBJKB_00572 at 583.737 kb on - strand, within OHPLBJKB_00572 at 583.737 kb on - strand, within OHPLBJKB_00572 at 583.737 kb on - strand, within OHPLBJKB_00572 at 583.743 kb on + strand, within OHPLBJKB_00572 at 583.744 kb on - strand, within OHPLBJKB_00572 at 583.747 kb on + strand, within OHPLBJKB_00572 at 583.747 kb on + strand, within OHPLBJKB_00572 at 583.748 kb on - strand, within OHPLBJKB_00572 at 583.748 kb on - strand, within OHPLBJKB_00572 at 583.748 kb on - strand, within OHPLBJKB_00572 at 583.748 kb on - strand, within OHPLBJKB_00572 at 583.808 kb on + strand, within OHPLBJKB_00572 at 583.809 kb on - strand, within OHPLBJKB_00572 at 583.867 kb on + strand, within OHPLBJKB_00572 at 584.007 kb on + strand, within OHPLBJKB_00572 at 584.008 kb on - strand, within OHPLBJKB_00572 at 584.008 kb on - strand, within OHPLBJKB_00572 at 584.115 kb on - strand, within OHPLBJKB_00572 at 584.175 kb on + strand, within OHPLBJKB_00572 at 584.176 kb on - strand, within OHPLBJKB_00572 at 584.213 kb on - strand, within OHPLBJKB_00572 at 584.287 kb on + strand, within OHPLBJKB_00572 at 584.307 kb on + strand, within OHPLBJKB_00572 at 584.307 kb on + strand, within OHPLBJKB_00572 at 584.308 kb on - strand, within OHPLBJKB_00572 at 584.311 kb on + strand, within OHPLBJKB_00572 at 584.311 kb on + strand, within OHPLBJKB_00572 at 584.311 kb on + strand, within OHPLBJKB_00572 at 584.454 kb on - strand at 584.454 kb on - strand at 584.551 kb on + strand, within OHPLBJKB_00573 at 584.558 kb on + strand, within OHPLBJKB_00573 at 584.559 kb on - strand, within OHPLBJKB_00573 at 584.565 kb on + strand, within OHPLBJKB_00573 at 584.565 kb on + strand, within OHPLBJKB_00573 at 584.565 kb on + strand, within OHPLBJKB_00573 at 584.565 kb on + strand, within OHPLBJKB_00573 at 584.565 kb on + strand, within OHPLBJKB_00573 at 584.566 kb on - strand, within OHPLBJKB_00573 at 584.582 kb on - strand, within OHPLBJKB_00573 at 584.586 kb on + strand, within OHPLBJKB_00573 at 584.587 kb on - strand, within OHPLBJKB_00573 at 584.649 kb on + strand, within OHPLBJKB_00573 at 584.704 kb on + strand, within OHPLBJKB_00573 at 584.768 kb on - strand, within OHPLBJKB_00573 at 584.786 kb on - strand, within OHPLBJKB_00573 at 584.786 kb on - strand, within OHPLBJKB_00573 at 584.826 kb on + strand, within OHPLBJKB_00573 at 584.870 kb on + strand, within OHPLBJKB_00573 at 584.871 kb on - strand, within OHPLBJKB_00573 at 584.880 kb on + strand, within OHPLBJKB_00573 at 584.881 kb on - strand, within OHPLBJKB_00573 at 584.907 kb on + strand at 584.907 kb on + strand at 584.907 kb on + strand at 584.908 kb on - strand at 584.908 kb on - strand at 584.908 kb on - strand at 584.908 kb on - strand at 584.908 kb on - strand at 584.909 kb on + strand at 584.909 kb on + strand at 584.909 kb on + strand at 584.910 kb on - strand at 585.084 kb on + strand, within OHPLBJKB_00574 at 585.084 kb on + strand, within OHPLBJKB_00574 at 585.084 kb on + strand, within OHPLBJKB_00574 at 585.084 kb on + strand, within OHPLBJKB_00574 at 585.084 kb on + strand, within OHPLBJKB_00574 at 585.084 kb on + strand, within OHPLBJKB_00574 at 585.084 kb on + strand, within OHPLBJKB_00574 at 585.084 kb on + strand, within OHPLBJKB_00574 at 585.084 kb on + strand, within OHPLBJKB_00574 at 585.085 kb on - strand, within OHPLBJKB_00574 at 585.085 kb on - strand, within OHPLBJKB_00574 at 585.085 kb on - strand, within OHPLBJKB_00574 at 585.085 kb on - strand, within OHPLBJKB_00574 at 585.085 kb on - strand, within OHPLBJKB_00574 at 585.087 kb on + strand, within OHPLBJKB_00574 at 585.087 kb on + strand, within OHPLBJKB_00574 at 585.087 kb on + strand, within OHPLBJKB_00574 at 585.088 kb on - strand, within OHPLBJKB_00574 at 585.120 kb on + strand, within OHPLBJKB_00574 at 585.120 kb on + strand, within OHPLBJKB_00574 at 585.121 kb on - strand, within OHPLBJKB_00574 at 585.121 kb on - strand, within OHPLBJKB_00574 at 585.208 kb on - strand, within OHPLBJKB_00574 at 585.208 kb on - strand, within OHPLBJKB_00574 at 585.250 kb on + strand at 585.251 kb on - strand at 585.296 kb on - strand at 585.371 kb on + strand at 585.392 kb on + strand at 585.557 kb on - strand at 585.557 kb on - strand at 585.589 kb on + strand, within OHPLBJKB_00575 at 585.644 kb on - strand, within OHPLBJKB_00575 at 585.766 kb on - strand, within OHPLBJKB_00575 at 585.782 kb on - strand, within OHPLBJKB_00575 at 585.836 kb on - strand, within OHPLBJKB_00575 at 585.836 kb on - strand, within OHPLBJKB_00575 at 585.937 kb on - strand, within OHPLBJKB_00575 at 585.937 kb on - strand, within OHPLBJKB_00575 at 585.937 kb on - strand, within OHPLBJKB_00575 at 585.937 kb on - strand, within OHPLBJKB_00575 at 585.937 kb on - strand, within OHPLBJKB_00575 at 585.937 kb on - strand, within OHPLBJKB_00575 at 585.940 kb on + strand, within OHPLBJKB_00575 at 585.941 kb on - strand, within OHPLBJKB_00575
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 583,518 - -0.8 583,518 - +0.1 583,518 - -0.7 583,558 + +0.3 583,559 - -2.0 583,613 - -0.2 583,613 - -1.1 583,613 - -1.1 583,615 + -0.5 583,615 + +0.1 583,616 - -0.5 583,622 - -0.2 583,736 + OHPLBJKB_00572 0.15 -0.0 583,736 + OHPLBJKB_00572 0.15 +0.3 583,737 - OHPLBJKB_00572 0.15 +0.1 583,737 - OHPLBJKB_00572 0.15 -0.1 583,737 - OHPLBJKB_00572 0.15 -0.1 583,743 + OHPLBJKB_00572 0.16 -1.2 583,744 - OHPLBJKB_00572 0.16 -1.2 583,747 + OHPLBJKB_00572 0.16 -0.4 583,747 + OHPLBJKB_00572 0.16 -1.2 583,748 - OHPLBJKB_00572 0.16 -0.4 583,748 - OHPLBJKB_00572 0.16 -1.1 583,748 - OHPLBJKB_00572 0.16 -1.6 583,748 - OHPLBJKB_00572 0.16 -0.6 583,808 + OHPLBJKB_00572 0.24 -0.2 583,809 - OHPLBJKB_00572 0.24 -0.2 583,867 + OHPLBJKB_00572 0.31 -0.3 584,007 + OHPLBJKB_00572 0.48 -1.3 584,008 - OHPLBJKB_00572 0.48 -1.8 584,008 - OHPLBJKB_00572 0.48 -0.4 584,115 - OHPLBJKB_00572 0.62 -0.1 584,175 + OHPLBJKB_00572 0.69 -0.5 584,176 - OHPLBJKB_00572 0.69 -0.9 584,213 - OHPLBJKB_00572 0.74 +0.4 584,287 + OHPLBJKB_00572 0.83 -0.2 584,307 + OHPLBJKB_00572 0.85 -1.4 584,307 + OHPLBJKB_00572 0.85 -0.2 584,308 - OHPLBJKB_00572 0.85 +0.5 584,311 + OHPLBJKB_00572 0.86 +0.4 584,311 + OHPLBJKB_00572 0.86 -0.4 584,311 + OHPLBJKB_00572 0.86 -0.9 584,454 - -0.7 584,454 - +0.1 584,551 + OHPLBJKB_00573 0.15 +0.3 584,558 + OHPLBJKB_00573 0.17 -0.7 584,559 - OHPLBJKB_00573 0.17 +0.1 584,565 + OHPLBJKB_00573 0.18 -1.0 584,565 + OHPLBJKB_00573 0.18 +1.0 584,565 + OHPLBJKB_00573 0.18 +0.6 584,565 + OHPLBJKB_00573 0.18 -0.3 584,565 + OHPLBJKB_00573 0.18 -0.3 584,566 - OHPLBJKB_00573 0.18 -1.1 584,582 - OHPLBJKB_00573 0.22 +0.7 584,586 + OHPLBJKB_00573 0.23 -0.6 584,587 - OHPLBJKB_00573 0.23 +0.4 584,649 + OHPLBJKB_00573 0.36 +0.3 584,704 + OHPLBJKB_00573 0.48 -0.4 584,768 - OHPLBJKB_00573 0.62 -0.7 584,786 - OHPLBJKB_00573 0.66 -0.3 584,786 - OHPLBJKB_00573 0.66 -0.7 584,826 + OHPLBJKB_00573 0.74 -0.6 584,870 + OHPLBJKB_00573 0.84 -0.5 584,871 - OHPLBJKB_00573 0.84 -1.8 584,880 + OHPLBJKB_00573 0.86 +0.7 584,881 - OHPLBJKB_00573 0.86 +0.8 584,907 + +0.2 584,907 + -0.7 584,907 + -0.5 584,908 - -0.7 584,908 - +0.4 584,908 - +0.5 584,908 - +0.1 584,908 - -0.7 584,909 + -1.0 584,909 + +0.4 584,909 + -1.9 584,910 - -0.3 585,084 + OHPLBJKB_00574 0.42 -0.1 585,084 + OHPLBJKB_00574 0.42 -1.1 585,084 + OHPLBJKB_00574 0.42 +0.1 585,084 + OHPLBJKB_00574 0.42 -0.2 585,084 + OHPLBJKB_00574 0.42 +0.0 585,084 + OHPLBJKB_00574 0.42 -0.4 585,084 + OHPLBJKB_00574 0.42 -0.8 585,084 + OHPLBJKB_00574 0.42 -1.6 585,084 + OHPLBJKB_00574 0.42 +1.1 585,085 - OHPLBJKB_00574 0.42 -1.2 585,085 - OHPLBJKB_00574 0.42 -1.9 585,085 - OHPLBJKB_00574 0.42 -0.5 585,085 - OHPLBJKB_00574 0.42 +0.7 585,085 - OHPLBJKB_00574 0.42 -1.0 585,087 + OHPLBJKB_00574 0.43 +0.2 585,087 + OHPLBJKB_00574 0.43 -0.1 585,087 + OHPLBJKB_00574 0.43 -0.1 585,088 - OHPLBJKB_00574 0.43 -1.5 585,120 + OHPLBJKB_00574 0.52 -1.1 585,120 + OHPLBJKB_00574 0.52 -0.2 585,121 - OHPLBJKB_00574 0.53 -0.3 585,121 - OHPLBJKB_00574 0.53 +0.2 585,208 - OHPLBJKB_00574 0.79 -0.6 585,208 - OHPLBJKB_00574 0.79 -0.6 585,250 + -1.5 585,251 - +1.2 585,296 - -0.5 585,371 + -0.1 585,392 + -1.1 585,557 - +0.4 585,557 - -0.3 585,589 + OHPLBJKB_00575 0.10 -0.9 585,644 - OHPLBJKB_00575 0.14 +0.5 585,766 - OHPLBJKB_00575 0.22 -1.0 585,782 - OHPLBJKB_00575 0.23 -1.1 585,836 - OHPLBJKB_00575 0.26 +0.2 585,836 - OHPLBJKB_00575 0.26 -0.2 585,937 - OHPLBJKB_00575 0.32 -0.4 585,937 - OHPLBJKB_00575 0.32 -0.2 585,937 - OHPLBJKB_00575 0.32 -1.3 585,937 - OHPLBJKB_00575 0.32 -0.6 585,937 - OHPLBJKB_00575 0.32 -0.6 585,937 - OHPLBJKB_00575 0.32 +0.3 585,940 + OHPLBJKB_00575 0.33 -0.8 585,941 - OHPLBJKB_00575 0.33 -0.5
Or see this region's nucleotide sequence