Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24560

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
4,681,093	+				+0.1
4,681,093	+				+2.1
4,681,113	-				+1.2
4,682,544	+		LU632_RS24565	0.30	-0.9
4,682,657	+				-0.7
4,682,657	+				-1.8
4,682,658	-				-0.4
4,682,677	+				-0.7
4,682,678	-				+2.4
4,682,678	-				+1.0
4,682,678	-				+0.3
4,682,678	-				-2.2
4,682,689	-				+3.7
4,682,745	+				-1.6
4,682,746	-				-0.4
4,682,760	+				+0.2
4,682,873	-				-0.5
4,682,918	-		LU632_RS24570	0.12	+0.5
4,682,992	+		LU632_RS24570	0.18	-1.3
4,682,992	+		LU632_RS24570	0.18	-0.3
4,683,155	+		LU632_RS24570	0.31	+0.7