Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23960

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
4,567,197	+		LU632_RS23950	0.42	-0.2
4,567,198	-		LU632_RS23950	0.42	-0.8
4,567,198	-		LU632_RS23950	0.42	+0.1
4,567,198	-		LU632_RS23950	0.42	-0.7
4,567,198	-		LU632_RS23950	0.42	+0.2
4,567,201	-		LU632_RS23950	0.42	+1.0
4,567,245	+		LU632_RS23950	0.47	+1.6
4,567,246	-		LU632_RS23950	0.47	+0.5
4,567,265	-		LU632_RS23950	0.49	-1.1
4,567,438	-		LU632_RS23950	0.66	+1.4
4,567,438	-		LU632_RS23950	0.66	-1.6
4,567,441	+		LU632_RS23950	0.67	-0.3
4,567,508	+		LU632_RS23950	0.73	+2.3
4,567,811	-	fadA	LU632_RS23955	0.12	+0.0
4,567,893	-	fadA	LU632_RS23955	0.37	-0.1
4,567,893	-	fadA	LU632_RS23955	0.37	+2.3
4,567,893	-	fadA	LU632_RS23955	0.37	-0.1
4,568,055	+	fadA	LU632_RS23955	0.86	-1.8
4,568,056	-	fadA	LU632_RS23955	0.86	+2.6
4,568,125	-				-0.6
4,568,167	+				+1.2