Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23285

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
4,435,025	-		LU632_RS23280	0.26	+0.6
4,435,025	-		LU632_RS23280	0.26	+1.2
4,435,025	-		LU632_RS23280	0.26	-1.9
4,435,122	-		LU632_RS23280	0.36	-0.8
4,435,132	+		LU632_RS23280	0.38	-0.3
4,435,132	+		LU632_RS23280	0.38	-0.8
4,435,132	+		LU632_RS23280	0.38	-0.1
4,435,162	-		LU632_RS23280	0.41	-1.7
4,435,162	-		LU632_RS23280	0.41	-0.9
4,435,341	+		LU632_RS23280	0.61	-1.8
4,435,438	-		LU632_RS23280	0.72	+0.1
4,435,507	+		LU632_RS23280	0.80	+2.8
4,435,555	-		LU632_RS23280	0.85	+2.1
4,435,555	-		LU632_RS23280	0.85	+0.7
4,435,613	+				-2.6
4,435,613	+				+1.0
4,435,613	+				-0.6
4,435,614	-				+0.5
4,435,614	-				+1.8
4,435,614	-				+0.2
4,435,614	-				-0.5
4,435,614	-				-2.4
4,435,614	-				-0.3
4,435,614	-				-2.6
4,435,668	-				-0.5
4,435,689	+				+2.2
4,435,720	+				+0.6
4,435,724	-				+0.5
4,435,724	-				+0.2
4,435,724	-				+0.4
4,435,724	-				-0.4
4,435,757	+				-1.5
4,435,758	-				+0.5
4,435,766	+				+0.8
4,435,767	-				+1.3
4,435,767	-				+0.3
4,437,310	+				+0.7
4,437,573	+		LU632_RS23290	0.64	-2.3
4,437,705	+				-0.3
4,437,705	+				+0.4
4,437,706	-				-0.6
4,437,706	-				-1.1
4,437,706	-				+2.1
4,437,717	-				+0.4
4,437,746	+		LU632_RS23295	0.38	+0.4
4,437,746	+		LU632_RS23295	0.38	+2.4
4,437,747	-		LU632_RS23295	0.39	+0.7
4,437,807	-		LU632_RS23295	0.64	-0.6
4,437,822	+		LU632_RS23295	0.70	-0.1
4,437,822	+		LU632_RS23295	0.70	+1.8
4,437,823	-		LU632_RS23295	0.70	-3.8
4,437,823	-		LU632_RS23295	0.70	-0.7
4,437,823	-		LU632_RS23295	0.70	-2.3
4,437,824	+		LU632_RS23295	0.71	-1.2
4,437,825	-		LU632_RS23295	0.71	-0.5
4,437,825	-		LU632_RS23295	0.71	-1.3
4,437,936	+				+0.4
4,437,958	+				+1.6
4,437,958	+				+0.9
4,437,959	-				-2.8
4,437,959	-				-1.3
4,437,959	-				+1.4
4,437,962	+				+1.9
4,437,962	+				+0.8
4,437,962	+				-0.3
4,437,963	-				+1.5
4,437,963	-				-1.1
4,437,963	-				-1.6
4,437,963	-				+1.1
4,438,064	+				-0.5
4,438,064	+				-0.2
4,438,064	+				+0.3
4,438,082	-				-0.8
4,438,084	-				+0.1
4,438,084	-				-2.4
4,438,094	-				-1.6
4,438,135	+				-1.8
4,438,171	+				+1.8
4,438,172	-				-0.3
4,438,172	-				+3.2
4,438,187	-				-0.5