Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19935

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
3,790,514	-	rseP	LU632_RS19930	0.46	-4.7
3,790,517	-	rseP	LU632_RS19930	0.46	-2.6
3,790,755	-	rseP	LU632_RS19930	0.63	-2.1
3,790,755	-	rseP	LU632_RS19930	0.63	-2.2
3,790,755	-	rseP	LU632_RS19930	0.63	-2.5
3,790,889	-	rseP	LU632_RS19930	0.73	-0.6
3,790,949	-	rseP	LU632_RS19930	0.78	-1.0
3,791,074	-	rseP	LU632_RS19930	0.87	-1.6
3,791,216	-				-2.5
3,791,244	-				-3.9
3,792,938	-				+3.1
3,792,938	-				+0.6
3,792,980	-				+0.3
3,793,027	-				+1.0
3,793,027	-				+1.7
3,793,029	-				-2.6
3,793,029	-				-2.3
3,793,035	+				-2.4
3,793,055	-				-0.9
3,793,084	-				+0.0
3,793,084	-				+1.5