Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17755

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
3,339,880	-				-3.1
3,339,978	+	guaB	LU632_RS17755	0.15	+0.6
3,340,080	+	guaB	LU632_RS17755	0.22	+0.6
3,340,828	-	guaB	LU632_RS17755	0.73	-1.2
3,340,856	-	guaB	LU632_RS17755	0.75	-1.7
3,341,260	+				-2.3
3,341,282	-				-2.9
3,341,349	+				-2.6
3,341,353	-				+0.2
3,341,363	+				+0.4
3,341,440	+				-0.2
3,341,537	+	xseA	LU632_RS17760	0.10	+0.3
3,341,698	+	xseA	LU632_RS17760	0.21	+0.5
3,341,698	+	xseA	LU632_RS17760	0.21	-0.8
3,341,752	+	xseA	LU632_RS17760	0.25	+0.3
3,341,909	+	xseA	LU632_RS17760	0.36	-1.0
3,341,994	+	xseA	LU632_RS17760	0.42	-0.0
3,341,994	+	xseA	LU632_RS17760	0.42	-0.9
3,341,995	-	xseA	LU632_RS17760	0.42	-1.4
3,341,995	-	xseA	LU632_RS17760	0.42	+0.8
3,341,995	-	xseA	LU632_RS17760	0.42	-0.9
3,342,068	-	xseA	LU632_RS17760	0.48	-0.1
3,342,068	-	xseA	LU632_RS17760	0.48	-1.1
3,342,092	-	xseA	LU632_RS17760	0.49	-0.3
3,342,125	-	xseA	LU632_RS17760	0.52	-2.5