Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16060

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
3,032,483	-	ybgC	LU632_RS16050	0.28	-3.4
3,032,487	-	ybgC	LU632_RS16050	0.29	-2.6
3,032,489	-	ybgC	LU632_RS16050	0.30	+2.1
3,032,489	-	ybgC	LU632_RS16050	0.30	+1.9
3,032,525	-	ybgC	LU632_RS16050	0.39	-1.0
3,032,525	-	ybgC	LU632_RS16050	0.39	-0.0
3,032,525	-	ybgC	LU632_RS16050	0.39	-0.7
3,032,666	-	ybgC	LU632_RS16050	0.73	-2.3
3,032,692	-	ybgC	LU632_RS16050	0.80	-1.8
3,032,692	-	ybgC	LU632_RS16050	0.80	-0.6
3,032,737	-				-1.5
3,032,777	-				+0.4
3,032,777	-				-0.5
3,032,806	-				-2.2
3,032,855	+				-0.6
3,032,985	+				+0.8
3,033,016	-				+0.4
3,033,055	+				+0.9
3,033,055	+				+2.1
3,033,164	+				-0.6
3,033,164	+				-0.2
3,033,165	-				+2.3
3,033,165	-				-2.4
3,033,221	-				-1.0