Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12900

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
2,458,892	+	adhE	LU632_RS12895	0.72	-0.2
2,458,893	-	adhE	LU632_RS12895	0.72	-0.9
2,458,893	-	adhE	LU632_RS12895	0.72	-3.0
2,458,893	-	adhE	LU632_RS12895	0.72	+0.6
2,458,899	-	adhE	LU632_RS12895	0.72	-1.2
2,458,953	+	adhE	LU632_RS12895	0.74	-0.6
2,458,954	-	adhE	LU632_RS12895	0.74	-3.6
2,458,977	+	adhE	LU632_RS12895	0.75	+0.5
2,458,996	+	adhE	LU632_RS12895	0.76	-0.6
2,459,081	+	adhE	LU632_RS12895	0.79	-2.1
2,459,081	+	adhE	LU632_RS12895	0.79	+0.6
2,459,093	+	adhE	LU632_RS12895	0.79	+1.2
2,459,131	+	adhE	LU632_RS12895	0.81	+1.0
2,459,131	+	adhE	LU632_RS12895	0.81	-0.4
2,459,131	+	adhE	LU632_RS12895	0.81	+1.4
2,459,132	-	adhE	LU632_RS12895	0.81	-0.2
2,459,132	-	adhE	LU632_RS12895	0.81	+1.1
2,459,259	-	adhE	LU632_RS12895	0.85	-0.6
2,459,302	+	adhE	LU632_RS12895	0.87	+0.3
2,459,303	-	adhE	LU632_RS12895	0.87	+2.6
2,459,325	-	adhE	LU632_RS12895	0.88	-0.3
2,459,363	-	adhE	LU632_RS12895	0.89	-1.4
2,459,363	-	adhE	LU632_RS12895	0.89	-0.3
2,459,460	-				+1.8
2,459,557	-				+0.1
2,459,701	-				-0.4
2,459,726	-				+0.4
2,459,752	-				+1.2
2,459,859	-				-0.7
2,459,925	-				+0.9
2,461,121	-	hns	LU632_RS12905	0.49	-1.4
2,461,169	+	hns	LU632_RS12905	0.60	-1.2
2,461,218	+	hns	LU632_RS12905	0.73	-3.0
2,461,218	+	hns	LU632_RS12905	0.73	+0.6
2,461,327	-				+0.1
2,461,327	-				-0.4
2,461,340	-				-1.4