Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11985

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
2,274,241	+				-0.2
2,274,304	+				+0.2
2,274,328	+				-0.3
2,274,329	-				+0.7
2,274,329	-				-0.1
2,274,332	-				-1.2
2,274,336	-				-1.0
2,274,345	-				-0.2
2,274,351	-				-1.4
2,274,351	-				+2.4
2,274,359	+				+0.1
2,274,435	+				+0.1
2,274,444	+				-2.4
2,274,463	+				+1.4
2,274,506	-		LU632_RS11980	0.10	+1.5
2,274,506	-		LU632_RS11980	0.10	-1.3
2,274,579	+		LU632_RS11980	0.63	+0.1
2,276,422	+				+1.0
2,276,490	+				-1.0
2,276,491	-				-0.3
2,276,492	+				-0.5
2,276,573	+				+2.0
2,276,574	-				-2.8
2,276,574	-				-0.1
2,276,578	-				-1.4
2,276,581	-				-0.0
2,276,593	+				-2.6
2,276,699	-				+0.1