Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11800

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
2,240,977	+		LU632_RS11795	0.29	-1.0
2,240,978	-		LU632_RS11795	0.29	+1.3
2,241,177	+		LU632_RS11795	0.43	+1.0
2,241,178	-		LU632_RS11795	0.44	+0.5
2,241,178	-		LU632_RS11795	0.44	+0.5
2,241,178	-		LU632_RS11795	0.44	+0.5
2,241,573	+		LU632_RS11795	0.71	+0.8
2,241,663	+		LU632_RS11795	0.78	+1.2
2,241,663	+		LU632_RS11795	0.78	+0.7
2,241,666	-		LU632_RS11795	0.78	-1.1
2,241,685	-		LU632_RS11795	0.79	+0.0
2,241,920	+				+0.7
2,241,921	-				+0.5
2,242,047	+		LU632_RS11800	0.13	-3.4
2,242,047	+		LU632_RS11800	0.13	+1.0
2,242,047	+		LU632_RS11800	0.13	-1.3
2,242,047	+		LU632_RS11800	0.13	+0.5
2,242,047	+		LU632_RS11800	0.13	-0.2
2,242,048	-		LU632_RS11800	0.13	-1.0
2,242,051	+		LU632_RS11800	0.14	+0.0
2,242,051	+		LU632_RS11800	0.14	+1.2
2,242,125	+		LU632_RS11800	0.23	+1.3
2,242,126	-		LU632_RS11800	0.23	+0.7
2,242,126	-		LU632_RS11800	0.23	-2.2
2,242,190	-		LU632_RS11800	0.31	+0.2
2,242,387	+		LU632_RS11800	0.55	+1.7
2,242,387	+		LU632_RS11800	0.55	-0.7
2,242,519	+		LU632_RS11800	0.71	+0.2
2,242,627	-		LU632_RS11800	0.84	+0.4
2,242,912	+				-2.2
2,242,913	-				-0.2
2,242,961	+	terL	LU632_RS11805	0.12	+2.3
2,242,961	+	terL	LU632_RS11805	0.12	+1.1
2,242,961	+	terL	LU632_RS11805	0.12	+0.4
2,242,962	-	terL	LU632_RS11805	0.12	+1.3
2,243,127	-	terL	LU632_RS11805	0.22	+0.6
2,243,265	-	terL	LU632_RS11805	0.30	+0.3
2,243,703	+	terL	LU632_RS11805	0.56	-0.3
2,243,704	-	terL	LU632_RS11805	0.56	+0.1