Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11595

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
2,209,791	+				+0.2
2,209,791	+				-0.3
2,209,791	+				-0.4
2,209,791	+				-3.4
2,209,795	+				-1.2
2,209,931	+				-0.1
2,209,931	+				+0.5
2,209,932	-				-2.2
2,210,017	+				-0.7
2,210,792	-		LU632_RS11595	0.40	+0.4
2,210,824	+		LU632_RS11595	0.48	+0.3
2,210,937	+		LU632_RS11595	0.75	+0.0
2,211,318	-		LU632_RS11600	0.60	-0.2
2,211,342	-		LU632_RS11600	0.66	-0.6
2,211,433	+		LU632_RS11600	0.88	+0.3
2,211,453	-				-0.9
2,211,455	+				-0.5
2,211,456	-				-1.5
2,211,456	-				-1.0
2,211,588	+				-1.1
2,211,592	+				-3.1
2,211,592	+				+0.0
2,211,883	+		LU632_RS11605	0.52	-0.1
2,211,884	-		LU632_RS11605	0.52	+1.5
2,211,896	+		LU632_RS11605	0.54	-3.3
2,211,897	-		LU632_RS11605	0.54	+0.1
2,211,898	+		LU632_RS11605	0.55	+0.3
2,211,898	+		LU632_RS11605	0.55	+0.2
2,211,898	+		LU632_RS11605	0.55	+0.6
2,211,899	-		LU632_RS11605	0.55	-2.0
2,211,900	+		LU632_RS11605	0.55	-0.8
2,211,901	-		LU632_RS11605	0.55	-0.6
2,211,997	+		LU632_RS11605	0.73	-1.9
2,211,998	-		LU632_RS11605	0.73	-1.8