Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08880

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
1,676,260	-		LU632_RS08875	0.41	-1.7
1,676,318	-		LU632_RS08875	0.45	-0.7
1,676,347	-		LU632_RS08875	0.47	-0.8
1,676,347	-		LU632_RS08875	0.47	-1.1
1,676,370	+		LU632_RS08875	0.49	-1.5
1,676,773	-		LU632_RS08875	0.80	-2.2
1,677,166	-				-3.5
1,677,291	+		LU632_RS08880	0.26	-4.6
1,677,599	-		LU632_RS08880	0.68	-2.3
1,677,657	-		LU632_RS08880	0.76	-2.7
1,677,737	-		LU632_RS08880	0.87	-4.9
1,678,060	-		LU632_RS08885	0.29	-4.5
1,678,060	-		LU632_RS08885	0.29	-3.3
1,678,182	-		LU632_RS08885	0.45	-2.9
1,678,292	+		LU632_RS08885	0.60	-5.2
1,678,357	-		LU632_RS08885	0.68	-4.7
1,678,428	+		LU632_RS08885	0.77	-2.9
1,678,428	+		LU632_RS08885	0.77	-3.2
1,678,582	+				+0.2
1,678,783	+				-1.0
1,678,811	-				-0.5