Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08380

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
1,574,959	+				+0.4
1,574,959	+				+0.6
1,574,959	+				+1.0
1,574,960	-				+1.1
1,574,984	+				-0.7
1,574,984	+				+0.2
1,574,985	-				+0.1
1,574,985	-				-0.2
1,574,986	+				-1.1
1,575,042	+				+1.0
1,575,042	+				-1.3
1,575,043	-				-0.5
1,575,043	-				+1.6
1,575,044	+				+0.4
1,575,044	+				+0.4
1,575,044	+				+0.1
1,575,095	-				-1.2
1,575,106	+				+0.5
1,575,107	-				+2.6
1,575,144	-				-0.9
1,575,146	+				+0.8
1,575,168	-				+0.9
1,575,973	-				+0.7
1,575,986	-				+1.8
1,576,016	+				+0.1
1,576,017	-				-1.0
1,576,018	+				-0.1
1,576,018	+				-1.5
1,576,033	-		LU632_RS08385	0.13	-0.1
1,576,127	+		LU632_RS08385	0.58	+1.0
1,576,128	-		LU632_RS08385	0.58	+0.8
1,576,340	+		LU632_RS08390	0.70	-1.0
1,576,353	+		LU632_RS08390	0.77	-0.5
1,576,353	+		LU632_RS08390	0.77	-0.1
1,576,353	+		LU632_RS08390	0.77	-0.2
1,576,353	+		LU632_RS08390	0.77	+0.4
1,576,353	+		LU632_RS08390	0.77	+0.8
1,576,354	-		LU632_RS08390	0.77	+0.7
1,576,354	-		LU632_RS08390	0.77	+0.8
1,576,354	-		LU632_RS08390	0.77	-0.2
1,576,366	+		LU632_RS08390	0.83	+1.0
1,576,435	+				-2.1
1,576,436	-				+2.3
1,576,477	+				-0.7
1,576,504	+				+0.1
1,576,622	-		LU632_RS08395	0.85	-0.3
1,576,652	-				+1.0
1,576,744	+				-1.3
1,576,744	+				-0.0
1,576,744	+				+0.4
1,576,744	+				-1.2