Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07910

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
1,479,013	+				+2.4
1,479,087	+		LU632_RS07915	0.21	-0.9
1,479,163	-		LU632_RS07915	0.46	-0.5
1,479,166	+		LU632_RS07915	0.47	+0.3
1,479,167	-		LU632_RS07915	0.47	+1.9
1,479,182	+		LU632_RS07915	0.52	+0.5
1,479,182	+		LU632_RS07915	0.52	-0.1
1,479,182	+		LU632_RS07915	0.52	+0.2
1,479,182	+		LU632_RS07915	0.52	-3.1
1,479,182	+		LU632_RS07915	0.52	-0.3
1,479,183	-		LU632_RS07915	0.52	-0.4
1,479,183	-		LU632_RS07915	0.52	+4.2
1,479,183	-		LU632_RS07915	0.52	-2.4
1,479,183	-		LU632_RS07915	0.52	-2.1
1,479,183	-		LU632_RS07915	0.52	-0.2
1,479,183	-		LU632_RS07915	0.52	-2.1
1,479,186	+		LU632_RS07915	0.53	-1.8
1,479,186	+		LU632_RS07915	0.53	+0.7
1,479,186	+		LU632_RS07915	0.53	+2.2
1,479,187	-		LU632_RS07915	0.53	-0.7
1,479,187	-		LU632_RS07915	0.53	-0.8
1,479,187	-		LU632_RS07915	0.53	+0.2
1,479,187	-		LU632_RS07915	0.53	-1.7
1,479,187	-		LU632_RS07915	0.53	+0.3
1,479,187	-		LU632_RS07915	0.53	-1.7
1,479,220	-		LU632_RS07915	0.64	+0.2
1,479,312	-				-1.3
1,479,312	-				+1.7
1,479,329	-				-0.2
1,479,370	+				-0.7
1,479,371	-				-1.5
1,479,403	-				-0.3