Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05380
Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) |
---|---|---|---|---|---|
remove | |||||
1,036,505 | + | -0.0 | |||
1,036,505 | + | -0.2 | |||
1,036,615 | - | -0.0 | |||
1,036,645 | + | +0.1 | |||
1,036,646 | - | +0.3 | |||
1,036,701 | - | -0.2 | |||
1,036,720 | + | -1.6 | |||
1,036,778 | + | -1.4 | |||
1,038,440 | + | -2.7 | |||
1,038,478 | + | +0.7 | |||
1,038,479 | - | -0.9 | |||
1,038,479 | - | -0.7 | |||
1,038,479 | - | -0.7 | |||
1,038,481 | + | +0.6 | |||
1,038,481 | + | -0.1 | |||
1,038,482 | - | -0.2 | |||
1,038,482 | - | +0.9 | |||
1,038,482 | - | -0.8 | |||
1,038,505 | - | +0.3 | |||
1,038,515 | + | +0.4 | |||
1,038,525 | - | -0.5 | |||
1,038,546 | - | -0.6 | |||
1,038,587 | - | +1.0 | |||
1,038,653 | - | +1.9 | |||
1,038,667 | + | -1.3 | |||
1,038,752 | + | -2.6 | |||
1,038,753 | - | -2.7 | |||
1,038,781 | - | +1.3 | |||
1,038,863 | - | +1.5 | |||
1,038,886 | + | -0.5 | |||
1,038,886 | + | -0.6 | |||
1,038,886 | + | +0.2 | |||
1,038,890 | + | +0.6 | |||
1,038,890 | + | -0.8 | |||
1,038,942 | + | -0.2 | |||
1,038,943 | - | +1.5 |
Or see this region's nucleotide sequence