Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05320

Experiment: Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2)
1,027,404	+		LU632_RS05315	0.19	+0.7
1,027,405	-		LU632_RS05315	0.19	-1.8
1,027,414	+		LU632_RS05315	0.20	-0.3
1,027,427	-		LU632_RS05315	0.21	+0.7
1,027,429	-		LU632_RS05315	0.22	-1.3
1,027,429	-		LU632_RS05315	0.22	+1.0
1,027,580	+		LU632_RS05315	0.38	-1.7
1,027,687	+		LU632_RS05315	0.50	-2.9
1,027,689	+		LU632_RS05315	0.50	-0.8
1,027,704	+		LU632_RS05315	0.52	+0.2
1,027,705	-		LU632_RS05315	0.52	-1.6
1,027,797	+		LU632_RS05315	0.62	-1.6
1,027,818	+		LU632_RS05315	0.64	+0.8
1,027,827	+		LU632_RS05315	0.65	-1.0
1,027,943	-		LU632_RS05315	0.78	+0.5
1,027,997	-		LU632_RS05315	0.84	+0.4
1,028,024	-		LU632_RS05315	0.87	-1.4
1,028,167	-				-1.4
1,028,196	+				+1.1
1,028,201	-				-0.8
1,028,228	-				-0.0
1,028,229	+				-0.2
1,028,230	-				-0.2
1,028,409	+		LU632_RS05320	0.33	+0.0
1,029,052	-				+0.3
1,029,068	+				+1.3
1,029,068	+				+2.5
1,029,156	+				-0.7
1,029,223	-				-0.3
1,029,261	+				-2.6
1,029,262	-				-2.6
1,029,267	-				+1.0
1,029,267	-				+0.1
1,029,389	-				+0.7
1,029,625	+				+1.2
1,029,627	+				+0.4
1,029,627	+				+1.3
1,029,628	-				-1.5
1,029,710	-		LU632_RS05325	0.30	+0.7