Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03977

Experiment: lib only

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	lib only
4,173,541	+		OHPLBJKB_03976	0.57	+0.9
4,173,558	+		OHPLBJKB_03976	0.58	-0.6
4,173,558	+		OHPLBJKB_03976	0.58	-0.3
4,173,648	+		OHPLBJKB_03976	0.63	+0.0
4,173,649	-		OHPLBJKB_03976	0.63	+0.1
4,173,692	+		OHPLBJKB_03976	0.66	+1.1
4,173,692	+		OHPLBJKB_03976	0.66	-1.3
4,173,700	+		OHPLBJKB_03976	0.66	+0.8
4,173,817	+		OHPLBJKB_03976	0.73	-0.1
4,173,946	+		OHPLBJKB_03976	0.81	-1.7
4,173,947	-		OHPLBJKB_03976	0.81	-0.2
4,173,947	-		OHPLBJKB_03976	0.81	+0.4
4,174,229	+				+0.3
4,174,235	+				-2.6
4,174,235	+				-0.4
4,174,235	+				+0.8
4,174,282	-				-0.1
4,174,361	-				-1.8
4,174,408	+				-1.3
4,174,408	+				-0.4
4,174,408	+				-0.1
4,174,409	-				-0.8
4,174,429	+				+0.2
4,174,429	+				+0.4
4,174,429	+				+1.2
4,174,430	-				-0.4
4,174,430	-				+0.3
4,174,430	-				+0.1
4,174,430	-				+0.8
4,174,542	+		OHPLBJKB_03977	0.10	-0.9
4,174,543	-		OHPLBJKB_03977	0.10	+0.3
4,174,570	-		OHPLBJKB_03977	0.12	-0.4
4,174,654	+		OHPLBJKB_03977	0.18	-0.8
4,174,654	+		OHPLBJKB_03977	0.18	-0.4
4,174,654	+		OHPLBJKB_03977	0.18	+0.0
4,174,654	+		OHPLBJKB_03977	0.18	-0.9
4,174,654	+		OHPLBJKB_03977	0.18	+0.2
4,174,655	-		OHPLBJKB_03977	0.18	-0.4
4,174,655	-		OHPLBJKB_03977	0.18	-1.1
4,174,655	-		OHPLBJKB_03977	0.18	+1.1
4,174,655	-		OHPLBJKB_03977	0.18	+0.4
4,174,655	-		OHPLBJKB_03977	0.18	-1.9
4,174,798	+		OHPLBJKB_03977	0.29	+0.6
4,174,798	+		OHPLBJKB_03977	0.29	-1.0
4,174,798	+		OHPLBJKB_03977	0.29	-1.2
4,174,798	+		OHPLBJKB_03977	0.29	+0.2
4,174,798	+		OHPLBJKB_03977	0.29	+1.2
4,174,799	-		OHPLBJKB_03977	0.29	-0.2
4,174,799	-		OHPLBJKB_03977	0.29	-0.2
4,174,799	-		OHPLBJKB_03977	0.29	+0.6
4,174,799	-		OHPLBJKB_03977	0.29	+0.1
4,174,799	-		OHPLBJKB_03977	0.29	-0.4
4,174,799	-		OHPLBJKB_03977	0.29	-0.6
4,174,799	-		OHPLBJKB_03977	0.29	+0.5
4,174,799	-		OHPLBJKB_03977	0.29	-0.2
4,174,931	+		OHPLBJKB_03977	0.39	-1.6
4,174,950	+		OHPLBJKB_03977	0.40	+0.6
4,174,951	-		OHPLBJKB_03977	0.40	-1.2
4,174,951	-		OHPLBJKB_03977	0.40	+0.3
4,174,990	-		OHPLBJKB_03977	0.43	-0.6
4,175,010	-		OHPLBJKB_03977	0.45	+0.4
4,175,090	+		OHPLBJKB_03977	0.51	+0.6
4,175,090	+		OHPLBJKB_03977	0.51	-1.3
4,175,091	-		OHPLBJKB_03977	0.51	-0.8
4,175,091	-		OHPLBJKB_03977	0.51	-0.3
4,175,091	-		OHPLBJKB_03977	0.51	+0.2
4,175,091	-		OHPLBJKB_03977	0.51	+0.4
4,175,190	+		OHPLBJKB_03977	0.58	-0.6
4,175,190	+		OHPLBJKB_03977	0.58	-0.2
4,175,191	-		OHPLBJKB_03977	0.58	-0.0
4,175,191	-		OHPLBJKB_03977	0.58	-1.0
4,175,191	-		OHPLBJKB_03977	0.58	-0.4
4,175,201	+		OHPLBJKB_03977	0.59	-0.1
4,175,201	+		OHPLBJKB_03977	0.59	-0.4
4,175,201	+		OHPLBJKB_03977	0.59	+0.5
4,175,202	-		OHPLBJKB_03977	0.59	+0.4
4,175,202	-		OHPLBJKB_03977	0.59	-0.2
4,175,202	-		OHPLBJKB_03977	0.59	-0.6
4,175,202	-		OHPLBJKB_03977	0.59	+0.4
4,175,388	+		OHPLBJKB_03977	0.73	-0.5
4,175,394	-		OHPLBJKB_03977	0.73	+0.4
4,175,437	-		OHPLBJKB_03977	0.76	+0.1
4,175,444	+		OHPLBJKB_03977	0.77	+0.5
4,175,444	+		OHPLBJKB_03977	0.77	-0.2
4,175,444	+		OHPLBJKB_03977	0.77	-1.3
4,175,444	+		OHPLBJKB_03977	0.77	+1.5
4,175,444	+		OHPLBJKB_03977	0.77	-1.0
4,175,444	+		OHPLBJKB_03977	0.77	+0.1
4,175,445	-		OHPLBJKB_03977	0.77	-0.2
4,175,445	-		OHPLBJKB_03977	0.77	-0.4
4,175,445	-		OHPLBJKB_03977	0.77	-0.6
4,175,445	-		OHPLBJKB_03977	0.77	-0.4
4,175,445	-		OHPLBJKB_03977	0.77	-0.1
4,175,445	-		OHPLBJKB_03977	0.77	-0.1
4,175,445	-		OHPLBJKB_03977	0.77	-2.2
4,175,445	-		OHPLBJKB_03977	0.77	+0.5
4,175,445	-		OHPLBJKB_03977	0.77	-0.9
4,175,613	-		OHPLBJKB_03977	0.89	-0.8
4,175,613	-		OHPLBJKB_03977	0.89	-0.3
4,175,613	-		OHPLBJKB_03977	0.89	+0.4
4,175,613	-		OHPLBJKB_03977	0.89	-0.3
4,175,750	+				-0.7
4,175,756	+				+1.5
4,175,756	+				-1.4
4,175,756	+				+0.2
4,175,756	+				+0.8
4,175,756	+				+0.4
4,175,757	-				-0.5
4,175,779	+				-0.4
4,175,779	+				+0.5
4,175,779	+				-0.4
4,175,779	+				+1.1
4,175,827	+				+0.5
4,175,828	-				-0.9
4,176,060	+				+0.9
4,176,062	+				-0.1
4,176,124	+				+0.1
4,176,130	+				-1.0
4,176,157	+				+0.5
4,176,157	+				-0.2
4,176,158	-				+0.3
4,176,158	-				-0.4
4,176,158	-				-0.3
4,176,163	+				+0.3
4,176,163	+				+0.4
4,176,163	+				-0.2
4,176,164	-				+0.0
4,176,164	-				-0.1
4,176,240	+				+0.3
4,176,283	-				+0.1
4,176,304	-				-0.2
4,176,351	-		OHPLBJKB_03978	0.11	-0.5
4,176,409	+		OHPLBJKB_03978	0.23	+1.3
4,176,410	-		OHPLBJKB_03978	0.23	-1.1
4,176,410	-		OHPLBJKB_03978	0.23	-0.1
4,176,410	-		OHPLBJKB_03978	0.23	-0.9
4,176,410	-		OHPLBJKB_03978	0.23	+1.0
4,176,440	+		OHPLBJKB_03978	0.30	-0.4
4,176,440	+		OHPLBJKB_03978	0.30	+0.0
4,176,441	-		OHPLBJKB_03978	0.30	-0.7
4,176,445	+		OHPLBJKB_03978	0.31	+0.4
4,176,445	+		OHPLBJKB_03978	0.31	-1.0
4,176,445	+		OHPLBJKB_03978	0.31	-1.1
4,176,445	+		OHPLBJKB_03978	0.31	+0.0
4,176,445	+		OHPLBJKB_03978	0.31	-0.6
4,176,445	+		OHPLBJKB_03978	0.31	+0.3
4,176,446	-		OHPLBJKB_03978	0.31	-0.2
4,176,509	+		OHPLBJKB_03978	0.45	-1.0
4,176,510	-		OHPLBJKB_03978	0.45	+0.2
4,176,514	+		OHPLBJKB_03978	0.46	+0.4
4,176,514	+		OHPLBJKB_03978	0.46	+0.6
4,176,514	+		OHPLBJKB_03978	0.46	+0.2
4,176,514	+		OHPLBJKB_03978	0.46	+0.0
4,176,515	-		OHPLBJKB_03978	0.46	+0.5
4,176,515	-		OHPLBJKB_03978	0.46	-0.1
4,176,515	-		OHPLBJKB_03978	0.46	-0.0
4,176,619	+		OHPLBJKB_03978	0.68	+0.2
4,176,620	-		OHPLBJKB_03978	0.68	+0.0
4,176,620	-		OHPLBJKB_03978	0.68	-0.5