Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_00766

Experiment: T7 MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_00764 and OHPLBJKB_00765 are separated by 17 nucleotidesOHPLBJKB_00765 and OHPLBJKB_00766 are separated by 17 nucleotidesOHPLBJKB_00766 and OHPLBJKB_00767 are separated by 226 nucleotides OHPLBJKB_00764: OHPLBJKB_00764 - hypothetical protein, at 785,597 to 786,163 _00764 OHPLBJKB_00765: OHPLBJKB_00765 - Pyridoxal phosphate homeostasis protein, at 786,181 to 786,885 _00765 OHPLBJKB_00766: OHPLBJKB_00766 - putative protein YggR, at 786,903 to 787,883 _00766 OHPLBJKB_00767: OHPLBJKB_00767 - IS110 family transposase IS621, at 788,110 to 789,090 _00767 Position (kb) 786 787 788Strain fitness (log2 ratio) -2 -1 0 1 2at 785.953 kb on + strand, within OHPLBJKB_00764at 785.954 kb on - strand, within OHPLBJKB_00764at 785.955 kb on + strand, within OHPLBJKB_00764at 785.955 kb on + strand, within OHPLBJKB_00764at 785.955 kb on + strand, within OHPLBJKB_00764at 785.956 kb on - strand, within OHPLBJKB_00764at 785.956 kb on - strand, within OHPLBJKB_00764at 786.036 kb on - strand, within OHPLBJKB_00764at 786.045 kb on - strand, within OHPLBJKB_00764at 786.045 kb on - strand, within OHPLBJKB_00764at 786.101 kb on + strand, within OHPLBJKB_00764at 786.101 kb on + strand, within OHPLBJKB_00764at 786.104 kb on + strand, within OHPLBJKB_00764at 786.119 kb on - strandat 786.120 kb on + strandat 786.120 kb on + strandat 786.120 kb on + strandat 786.120 kb on + strandat 786.121 kb on - strandat 786.121 kb on - strandat 786.121 kb on - strandat 786.157 kb on + strandat 786.158 kb on - strandat 786.189 kb on + strandat 786.240 kb on + strandat 786.241 kb on - strandat 786.241 kb on - strandat 786.241 kb on - strandat 786.331 kb on + strand, within OHPLBJKB_00765at 786.364 kb on + strand, within OHPLBJKB_00765at 786.364 kb on + strand, within OHPLBJKB_00765at 786.364 kb on + strand, within OHPLBJKB_00765at 786.364 kb on + strand, within OHPLBJKB_00765at 786.364 kb on + strand, within OHPLBJKB_00765at 786.365 kb on - strand, within OHPLBJKB_00765at 786.365 kb on - strand, within OHPLBJKB_00765at 786.369 kb on - strand, within OHPLBJKB_00765at 786.369 kb on - strand, within OHPLBJKB_00765at 786.369 kb on - strand, within OHPLBJKB_00765at 786.369 kb on - strand, within OHPLBJKB_00765at 786.369 kb on - strand, within OHPLBJKB_00765at 786.413 kb on - strand, within OHPLBJKB_00765at 786.422 kb on - strand, within OHPLBJKB_00765at 786.478 kb on - strand, within OHPLBJKB_00765at 786.582 kb on + strand, within OHPLBJKB_00765at 786.582 kb on + strand, within OHPLBJKB_00765at 786.582 kb on + strand, within OHPLBJKB_00765at 786.583 kb on - strand, within OHPLBJKB_00765at 786.621 kb on + strand, within OHPLBJKB_00765at 786.622 kb on - strand, within OHPLBJKB_00765at 786.624 kb on + strand, within OHPLBJKB_00765at 786.655 kb on + strand, within OHPLBJKB_00765at 786.655 kb on + strand, within OHPLBJKB_00765at 786.656 kb on - strand, within OHPLBJKB_00765at 786.656 kb on - strand, within OHPLBJKB_00765at 786.693 kb on + strand, within OHPLBJKB_00765at 786.693 kb on + strand, within OHPLBJKB_00765at 786.693 kb on + strand, within OHPLBJKB_00765at 786.693 kb on + strand, within OHPLBJKB_00765at 786.697 kb on + strand, within OHPLBJKB_00765at 786.697 kb on + strand, within OHPLBJKB_00765at 786.698 kb on - strand, within OHPLBJKB_00765at 786.713 kb on + strand, within OHPLBJKB_00765at 786.714 kb on - strand, within OHPLBJKB_00765at 786.714 kb on - strand, within OHPLBJKB_00765at 786.714 kb on - strand, within OHPLBJKB_00765at 786.799 kb on - strand, within OHPLBJKB_00765at 786.876 kb on + strandat 786.899 kb on + strandat 786.899 kb on + strandat 786.900 kb on - strandat 786.900 kb on - strandat 786.900 kb on - strandat 786.900 kb on - strandat 786.900 kb on - strandat 786.900 kb on - strandat 786.900 kb on - strandat 786.902 kb on + strandat 786.929 kb on + strandat 786.929 kb on + strandat 786.935 kb on - strandat 786.955 kb on + strandat 786.955 kb on + strandat 786.955 kb on + strandat 786.955 kb on + strandat 786.956 kb on - strandat 786.956 kb on - strandat 786.956 kb on - strandat 786.956 kb on - strandat 787.043 kb on - strand, within OHPLBJKB_00766at 787.189 kb on + strand, within OHPLBJKB_00766at 787.246 kb on + strand, within OHPLBJKB_00766at 787.246 kb on + strand, within OHPLBJKB_00766at 787.247 kb on - strand, within OHPLBJKB_00766at 787.305 kb on - strand, within OHPLBJKB_00766at 787.330 kb on - strand, within OHPLBJKB_00766at 787.334 kb on + strand, within OHPLBJKB_00766at 787.335 kb on - strand, within OHPLBJKB_00766at 787.383 kb on + strand, within OHPLBJKB_00766at 787.383 kb on + strand, within OHPLBJKB_00766at 787.383 kb on + strand, within OHPLBJKB_00766at 787.383 kb on + strand, within OHPLBJKB_00766at 787.389 kb on + strand, within OHPLBJKB_00766at 787.389 kb on + strand, within OHPLBJKB_00766at 787.389 kb on + strand, within OHPLBJKB_00766at 787.390 kb on - strand, within OHPLBJKB_00766at 787.439 kb on + strand, within OHPLBJKB_00766at 787.439 kb on + strand, within OHPLBJKB_00766at 787.440 kb on - strand, within OHPLBJKB_00766at 787.507 kb on + strand, within OHPLBJKB_00766at 787.507 kb on + strand, within OHPLBJKB_00766at 787.508 kb on - strand, within OHPLBJKB_00766at 787.508 kb on - strand, within OHPLBJKB_00766at 787.576 kb on + strand, within OHPLBJKB_00766at 787.576 kb on + strand, within OHPLBJKB_00766at 787.577 kb on - strand, within OHPLBJKB_00766at 787.577 kb on - strand, within OHPLBJKB_00766at 787.577 kb on - strand, within OHPLBJKB_00766at 787.577 kb on - strand, within OHPLBJKB_00766at 787.577 kb on - strand, within OHPLBJKB_00766at 787.577 kb on - strand, within OHPLBJKB_00766at 787.577 kb on - strand, within OHPLBJKB_00766at 787.577 kb on - strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.580 kb on + strand, within OHPLBJKB_00766at 787.581 kb on - strand, within OHPLBJKB_00766at 787.581 kb on - strand, within OHPLBJKB_00766at 787.581 kb on - strand, within OHPLBJKB_00766at 787.581 kb on - strand, within OHPLBJKB_00766at 787.581 kb on - strand, within OHPLBJKB_00766at 787.652 kb on + strand, within OHPLBJKB_00766at 787.667 kb on + strand, within OHPLBJKB_00766at 787.668 kb on - strand, within OHPLBJKB_00766at 787.668 kb on - strand, within OHPLBJKB_00766at 787.834 kb on + strandat 787.922 kb on - strandat 787.922 kb on - strandat 787.922 kb on - strandat 787.922 kb on - strandat 787.922 kb on - strandat 787.922 kb on - strandat 787.922 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction T7 MOI1
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785,953 + OHPLBJKB_00764 0.63 -0.4
785,954 - OHPLBJKB_00764 0.63 -0.2
785,955 + OHPLBJKB_00764 0.63 -0.2
785,955 + OHPLBJKB_00764 0.63 -0.3
785,955 + OHPLBJKB_00764 0.63 +0.6
785,956 - OHPLBJKB_00764 0.63 +0.2
785,956 - OHPLBJKB_00764 0.63 -0.7
786,036 - OHPLBJKB_00764 0.77 -0.3
786,045 - OHPLBJKB_00764 0.79 +0.3
786,045 - OHPLBJKB_00764 0.79 -0.3
786,101 + OHPLBJKB_00764 0.89 +2.0
786,101 + OHPLBJKB_00764 0.89 -0.5
786,104 + OHPLBJKB_00764 0.89 +0.6
786,119 - +0.0
786,120 + +0.0
786,120 + -1.1
786,120 + +1.5
786,120 + -0.5
786,121 - -0.3
786,121 - -1.0
786,121 - -0.7
786,157 + -1.8
786,158 - -0.4
786,189 + -1.8
786,240 + -0.5
786,241 - +0.2
786,241 - +0.1
786,241 - +0.0
786,331 + OHPLBJKB_00765 0.21 +0.2
786,364 + OHPLBJKB_00765 0.26 -0.7
786,364 + OHPLBJKB_00765 0.26 -0.1
786,364 + OHPLBJKB_00765 0.26 -0.9
786,364 + OHPLBJKB_00765 0.26 +1.2
786,364 + OHPLBJKB_00765 0.26 +0.3
786,365 - OHPLBJKB_00765 0.26 +0.2
786,365 - OHPLBJKB_00765 0.26 -0.9
786,369 - OHPLBJKB_00765 0.27 -0.3
786,369 - OHPLBJKB_00765 0.27 +0.3
786,369 - OHPLBJKB_00765 0.27 +0.4
786,369 - OHPLBJKB_00765 0.27 -1.1
786,369 - OHPLBJKB_00765 0.27 +0.9
786,413 - OHPLBJKB_00765 0.33 -0.0
786,422 - OHPLBJKB_00765 0.34 -0.1
786,478 - OHPLBJKB_00765 0.42 -1.0
786,582 + OHPLBJKB_00765 0.57 +1.2
786,582 + OHPLBJKB_00765 0.57 +0.0
786,582 + OHPLBJKB_00765 0.57 -1.0
786,583 - OHPLBJKB_00765 0.57 +1.6
786,621 + OHPLBJKB_00765 0.62 -0.3
786,622 - OHPLBJKB_00765 0.63 +0.0
786,624 + OHPLBJKB_00765 0.63 +0.7
786,655 + OHPLBJKB_00765 0.67 -1.0
786,655 + OHPLBJKB_00765 0.67 +0.4
786,656 - OHPLBJKB_00765 0.67 +0.0
786,656 - OHPLBJKB_00765 0.67 -0.3
786,693 + OHPLBJKB_00765 0.73 -0.1
786,693 + OHPLBJKB_00765 0.73 -0.5
786,693 + OHPLBJKB_00765 0.73 +0.0
786,693 + OHPLBJKB_00765 0.73 -0.6
786,697 + OHPLBJKB_00765 0.73 +0.3
786,697 + OHPLBJKB_00765 0.73 -0.1
786,698 - OHPLBJKB_00765 0.73 +0.9
786,713 + OHPLBJKB_00765 0.75 -0.5
786,714 - OHPLBJKB_00765 0.76 +0.2
786,714 - OHPLBJKB_00765 0.76 -0.8
786,714 - OHPLBJKB_00765 0.76 -0.9
786,799 - OHPLBJKB_00765 0.88 +0.4
786,876 + -0.2
786,899 + -0.9
786,899 + -0.2
786,900 - -0.8
786,900 - -0.8
786,900 - -0.2
786,900 - -1.1
786,900 - -0.4
786,900 - -0.9
786,900 - -1.4
786,902 + +0.3
786,929 + -0.8
786,929 + -0.0
786,935 - -0.1
786,955 + -1.3
786,955 + +0.2
786,955 + +1.8
786,955 + -1.4
786,956 - -0.7
786,956 - -0.2
786,956 - +1.2
786,956 - +0.3
787,043 - OHPLBJKB_00766 0.14 -1.4
787,189 + OHPLBJKB_00766 0.29 +0.8
787,246 + OHPLBJKB_00766 0.35 +0.2
787,246 + OHPLBJKB_00766 0.35 +0.7
787,247 - OHPLBJKB_00766 0.35 -0.1
787,305 - OHPLBJKB_00766 0.41 +0.3
787,330 - OHPLBJKB_00766 0.44 -1.2
787,334 + OHPLBJKB_00766 0.44 -0.2
787,335 - OHPLBJKB_00766 0.44 -0.3
787,383 + OHPLBJKB_00766 0.49 +0.2
787,383 + OHPLBJKB_00766 0.49 +0.6
787,383 + OHPLBJKB_00766 0.49 -1.2
787,383 + OHPLBJKB_00766 0.49 +0.1
787,389 + OHPLBJKB_00766 0.50 -1.0
787,389 + OHPLBJKB_00766 0.50 +0.0
787,389 + OHPLBJKB_00766 0.50 -0.6
787,390 - OHPLBJKB_00766 0.50 -0.9
787,439 + OHPLBJKB_00766 0.55 +0.1
787,439 + OHPLBJKB_00766 0.55 -1.0
787,440 - OHPLBJKB_00766 0.55 +0.0
787,507 + OHPLBJKB_00766 0.62 -0.5
787,507 + OHPLBJKB_00766 0.62 +0.6
787,508 - OHPLBJKB_00766 0.62 -0.5
787,508 - OHPLBJKB_00766 0.62 -0.5
787,576 + OHPLBJKB_00766 0.69 -0.0
787,576 + OHPLBJKB_00766 0.69 +0.5
787,577 - OHPLBJKB_00766 0.69 +0.6
787,577 - OHPLBJKB_00766 0.69 -0.0
787,577 - OHPLBJKB_00766 0.69 -0.4
787,577 - OHPLBJKB_00766 0.69 +0.3
787,577 - OHPLBJKB_00766 0.69 -0.8
787,577 - OHPLBJKB_00766 0.69 -0.4
787,577 - OHPLBJKB_00766 0.69 +1.5
787,577 - OHPLBJKB_00766 0.69 -1.4
787,580 + OHPLBJKB_00766 0.69 +0.2
787,580 + OHPLBJKB_00766 0.69 +0.4
787,580 + OHPLBJKB_00766 0.69 +0.2
787,580 + OHPLBJKB_00766 0.69 +0.6
787,580 + OHPLBJKB_00766 0.69 -1.0
787,580 + OHPLBJKB_00766 0.69 +0.7
787,580 + OHPLBJKB_00766 0.69 -0.1
787,580 + OHPLBJKB_00766 0.69 -0.4
787,580 + OHPLBJKB_00766 0.69 +0.0
787,580 + OHPLBJKB_00766 0.69 +0.1
787,580 + OHPLBJKB_00766 0.69 +0.8
787,580 + OHPLBJKB_00766 0.69 -0.5
787,581 - OHPLBJKB_00766 0.69 +0.8
787,581 - OHPLBJKB_00766 0.69 -0.0
787,581 - OHPLBJKB_00766 0.69 +1.8
787,581 - OHPLBJKB_00766 0.69 +0.2
787,581 - OHPLBJKB_00766 0.69 +0.3
787,652 + OHPLBJKB_00766 0.76 +0.1
787,667 + OHPLBJKB_00766 0.78 -0.3
787,668 - OHPLBJKB_00766 0.78 +0.8
787,668 - OHPLBJKB_00766 0.78 +0.2
787,834 + +0.2
787,922 - +1.0
787,922 - -1.4
787,922 - -0.2
787,922 - +0.0
787,922 - +0.7
787,922 - +0.2
787,922 - +0.8

Or see this region's nucleotide sequence