Experiment: T7 MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02312 and OHPLBJKB_02313 are separated by 100 nucleotides OHPLBJKB_02313 and OHPLBJKB_02314 are separated by 26 nucleotides
OHPLBJKB_02312: OHPLBJKB_02312 - Transcriptional repressor PaaX, at 2,414,962 to 2,415,912
_02312
OHPLBJKB_02313: OHPLBJKB_02313 - Phenylacetate-coenzyme A ligase, at 2,416,013 to 2,417,326
_02313
OHPLBJKB_02314: OHPLBJKB_02314 - 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase, at 2,417,353 to 2,418,558
_02314
Position (kb)
2416
2417
2418 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2415.086 kb on - strand, within OHPLBJKB_02312 at 2415.110 kb on + strand, within OHPLBJKB_02312 at 2415.120 kb on + strand, within OHPLBJKB_02312 at 2415.121 kb on - strand, within OHPLBJKB_02312 at 2415.121 kb on - strand, within OHPLBJKB_02312 at 2415.121 kb on - strand, within OHPLBJKB_02312 at 2415.220 kb on + strand, within OHPLBJKB_02312 at 2415.274 kb on + strand, within OHPLBJKB_02312 at 2415.317 kb on + strand, within OHPLBJKB_02312 at 2415.317 kb on + strand, within OHPLBJKB_02312 at 2415.318 kb on - strand, within OHPLBJKB_02312 at 2415.338 kb on - strand, within OHPLBJKB_02312 at 2415.338 kb on - strand, within OHPLBJKB_02312 at 2415.355 kb on + strand, within OHPLBJKB_02312 at 2415.356 kb on - strand, within OHPLBJKB_02312 at 2415.356 kb on - strand, within OHPLBJKB_02312 at 2415.454 kb on + strand, within OHPLBJKB_02312 at 2415.454 kb on + strand, within OHPLBJKB_02312 at 2415.454 kb on + strand, within OHPLBJKB_02312 at 2415.455 kb on - strand, within OHPLBJKB_02312 at 2415.455 kb on - strand, within OHPLBJKB_02312 at 2415.455 kb on - strand, within OHPLBJKB_02312 at 2415.455 kb on - strand, within OHPLBJKB_02312 at 2415.560 kb on - strand, within OHPLBJKB_02312 at 2415.589 kb on - strand, within OHPLBJKB_02312 at 2415.717 kb on + strand, within OHPLBJKB_02312 at 2415.717 kb on + strand, within OHPLBJKB_02312 at 2415.718 kb on - strand, within OHPLBJKB_02312 at 2415.720 kb on + strand, within OHPLBJKB_02312 at 2415.790 kb on - strand, within OHPLBJKB_02312 at 2415.790 kb on - strand, within OHPLBJKB_02312 at 2415.877 kb on + strand at 2415.877 kb on + strand at 2415.898 kb on - strand at 2415.898 kb on - strand at 2415.907 kb on - strand at 2415.930 kb on + strand at 2415.930 kb on + strand at 2415.953 kb on - strand at 2416.028 kb on - strand at 2416.088 kb on - strand at 2416.265 kb on + strand, within OHPLBJKB_02313 at 2416.464 kb on - strand, within OHPLBJKB_02313 at 2416.528 kb on - strand, within OHPLBJKB_02313 at 2416.562 kb on - strand, within OHPLBJKB_02313 at 2416.614 kb on + strand, within OHPLBJKB_02313 at 2416.618 kb on + strand, within OHPLBJKB_02313 at 2416.619 kb on - strand, within OHPLBJKB_02313 at 2416.619 kb on - strand, within OHPLBJKB_02313 at 2416.767 kb on + strand, within OHPLBJKB_02313 at 2416.767 kb on + strand, within OHPLBJKB_02313 at 2416.768 kb on - strand, within OHPLBJKB_02313 at 2416.790 kb on - strand, within OHPLBJKB_02313 at 2416.790 kb on - strand, within OHPLBJKB_02313 at 2416.790 kb on - strand, within OHPLBJKB_02313 at 2416.881 kb on + strand, within OHPLBJKB_02313 at 2416.920 kb on + strand, within OHPLBJKB_02313 at 2416.981 kb on + strand, within OHPLBJKB_02313 at 2417.011 kb on + strand, within OHPLBJKB_02313 at 2417.011 kb on + strand, within OHPLBJKB_02313 at 2417.012 kb on - strand, within OHPLBJKB_02313 at 2417.132 kb on - strand, within OHPLBJKB_02313 at 2417.226 kb on + strand at 2417.274 kb on - strand at 2417.314 kb on + strand at 2417.348 kb on + strand at 2417.558 kb on - strand, within OHPLBJKB_02314 at 2417.561 kb on - strand, within OHPLBJKB_02314 at 2417.561 kb on - strand, within OHPLBJKB_02314 at 2417.854 kb on + strand, within OHPLBJKB_02314 at 2417.855 kb on - strand, within OHPLBJKB_02314 at 2417.855 kb on - strand, within OHPLBJKB_02314 at 2417.855 kb on - strand, within OHPLBJKB_02314 at 2417.956 kb on + strand, within OHPLBJKB_02314 at 2418.246 kb on + strand, within OHPLBJKB_02314
Per-strain Table
Position Strand Gene LocusTag Fraction T7 MOI10 remove 2,415,086 - OHPLBJKB_02312 0.13 -0.4 2,415,110 + OHPLBJKB_02312 0.16 +2.2 2,415,120 + OHPLBJKB_02312 0.17 +0.5 2,415,121 - OHPLBJKB_02312 0.17 +0.8 2,415,121 - OHPLBJKB_02312 0.17 -0.2 2,415,121 - OHPLBJKB_02312 0.17 -0.4 2,415,220 + OHPLBJKB_02312 0.27 -0.1 2,415,274 + OHPLBJKB_02312 0.33 -0.6 2,415,317 + OHPLBJKB_02312 0.37 -0.9 2,415,317 + OHPLBJKB_02312 0.37 +0.3 2,415,318 - OHPLBJKB_02312 0.37 +0.9 2,415,338 - OHPLBJKB_02312 0.40 +0.2 2,415,338 - OHPLBJKB_02312 0.40 -0.7 2,415,355 + OHPLBJKB_02312 0.41 -0.2 2,415,356 - OHPLBJKB_02312 0.41 +0.0 2,415,356 - OHPLBJKB_02312 0.41 +0.2 2,415,454 + OHPLBJKB_02312 0.52 +0.4 2,415,454 + OHPLBJKB_02312 0.52 -0.4 2,415,454 + OHPLBJKB_02312 0.52 -0.2 2,415,455 - OHPLBJKB_02312 0.52 +0.6 2,415,455 - OHPLBJKB_02312 0.52 +0.9 2,415,455 - OHPLBJKB_02312 0.52 -0.8 2,415,455 - OHPLBJKB_02312 0.52 +1.1 2,415,560 - OHPLBJKB_02312 0.63 -0.3 2,415,589 - OHPLBJKB_02312 0.66 +1.2 2,415,717 + OHPLBJKB_02312 0.79 +0.0 2,415,717 + OHPLBJKB_02312 0.79 +1.3 2,415,718 - OHPLBJKB_02312 0.79 +0.0 2,415,720 + OHPLBJKB_02312 0.80 +0.2 2,415,790 - OHPLBJKB_02312 0.87 +0.2 2,415,790 - OHPLBJKB_02312 0.87 +0.1 2,415,877 + -1.4 2,415,877 + -0.3 2,415,898 - -0.5 2,415,898 - -0.9 2,415,907 - +0.7 2,415,930 + -0.0 2,415,930 + -2.1 2,415,953 - +0.5 2,416,028 - -0.4 2,416,088 - +0.6 2,416,265 + OHPLBJKB_02313 0.19 -0.6 2,416,464 - OHPLBJKB_02313 0.34 -0.9 2,416,528 - OHPLBJKB_02313 0.39 -0.6 2,416,562 - OHPLBJKB_02313 0.42 -0.1 2,416,614 + OHPLBJKB_02313 0.46 +1.2 2,416,618 + OHPLBJKB_02313 0.46 -1.5 2,416,619 - OHPLBJKB_02313 0.46 +0.3 2,416,619 - OHPLBJKB_02313 0.46 +0.2 2,416,767 + OHPLBJKB_02313 0.57 +0.8 2,416,767 + OHPLBJKB_02313 0.57 +0.1 2,416,768 - OHPLBJKB_02313 0.57 +0.1 2,416,790 - OHPLBJKB_02313 0.59 +0.1 2,416,790 - OHPLBJKB_02313 0.59 -0.3 2,416,790 - OHPLBJKB_02313 0.59 +0.6 2,416,881 + OHPLBJKB_02313 0.66 +0.8 2,416,920 + OHPLBJKB_02313 0.69 -0.4 2,416,981 + OHPLBJKB_02313 0.74 +0.1 2,417,011 + OHPLBJKB_02313 0.76 +0.6 2,417,011 + OHPLBJKB_02313 0.76 -0.1 2,417,012 - OHPLBJKB_02313 0.76 +1.6 2,417,132 - OHPLBJKB_02313 0.85 +0.3 2,417,226 + +0.8 2,417,274 - +0.7 2,417,314 + -1.4 2,417,348 + +0.3 2,417,558 - OHPLBJKB_02314 0.17 +0.6 2,417,561 - OHPLBJKB_02314 0.17 +0.3 2,417,561 - OHPLBJKB_02314 0.17 +0.4 2,417,854 + OHPLBJKB_02314 0.42 -0.7 2,417,855 - OHPLBJKB_02314 0.42 +0.3 2,417,855 - OHPLBJKB_02314 0.42 -0.2 2,417,855 - OHPLBJKB_02314 0.42 +0.1 2,417,956 + OHPLBJKB_02314 0.50 -0.7 2,418,246 + OHPLBJKB_02314 0.74 +0.3
Or see this region's nucleotide sequence