Experiment: B-glucan from yeast (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS03240 and ABI39_RS03245 are separated by 23 nucleotides ABI39_RS03245 and ABI39_RS03250 are separated by 43 nucleotides ABI39_RS03250 and ABI39_RS03255 are separated by 6 nucleotides ABI39_RS03255 and ABI39_RS03260 are separated by 26 nucleotides
ABI39_RS03240: ABI39_RS03240 - AraC family transcriptional regulator, at 940,028 to 940,957
_RS03240
ABI39_RS03245: ABI39_RS03245 - aldo/keto reductase, at 940,981 to 941,829
_RS03245
ABI39_RS03250: ABI39_RS03250 - aldo/keto reductase, at 941,873 to 942,736
_RS03250
ABI39_RS03255: ABI39_RS03255 - SDR family oxidoreductase, at 942,743 to 943,492
_RS03255
ABI39_RS03260: ABI39_RS03260 - NAD(P)H-dependent oxidoreductase, at 943,519 to 944,076
_RS03260
Position (kb) 941
942
943 Strain fitness (log2 ratio) -1
0
1 at 940.991 kb on + strand at 941.276 kb on - strand, within ABI39_RS03245 at 941.314 kb on + strand, within ABI39_RS03245 at 941.430 kb on - strand, within ABI39_RS03245 at 941.766 kb on + strand at 941.787 kb on - strand at 941.872 kb on + strand at 941.916 kb on + strand at 941.928 kb on + strand at 941.997 kb on + strand, within ABI39_RS03250 at 942.354 kb on + strand, within ABI39_RS03250 at 942.355 kb on - strand, within ABI39_RS03250 at 942.395 kb on + strand, within ABI39_RS03250 at 942.401 kb on - strand, within ABI39_RS03250 at 942.608 kb on - strand, within ABI39_RS03250 at 942.728 kb on - strand at 942.735 kb on - strand at 942.747 kb on - strand at 942.748 kb on + strand at 942.808 kb on + strand at 942.843 kb on + strand, within ABI39_RS03255 at 942.844 kb on - strand, within ABI39_RS03255 at 942.853 kb on - strand, within ABI39_RS03255 at 942.908 kb on + strand, within ABI39_RS03255 at 942.949 kb on + strand, within ABI39_RS03255 at 942.958 kb on + strand, within ABI39_RS03255 at 943.120 kb on - strand, within ABI39_RS03255 at 943.194 kb on - strand, within ABI39_RS03255 at 943.194 kb on - strand, within ABI39_RS03255 at 943.483 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction B-glucan from yeast (C) remove 940,991 + +0.7 941,276 - ABI39_RS03245 0.35 -0.3 941,314 + ABI39_RS03245 0.39 -0.4 941,430 - ABI39_RS03245 0.53 -0.8 941,766 + +0.7 941,787 - +0.1 941,872 + +0.4 941,916 + +0.1 941,928 + -0.2 941,997 + ABI39_RS03250 0.14 -0.2 942,354 + ABI39_RS03250 0.56 +0.1 942,355 - ABI39_RS03250 0.56 -0.6 942,395 + ABI39_RS03250 0.60 -0.4 942,401 - ABI39_RS03250 0.61 -1.0 942,608 - ABI39_RS03250 0.85 -1.0 942,728 - -0.3 942,735 - -0.4 942,747 - +0.7 942,748 + +0.4 942,808 + +0.0 942,843 + ABI39_RS03255 0.13 +1.2 942,844 - ABI39_RS03255 0.13 +0.2 942,853 - ABI39_RS03255 0.15 -0.4 942,908 + ABI39_RS03255 0.22 +0.4 942,949 + ABI39_RS03255 0.27 -0.3 942,958 + ABI39_RS03255 0.29 +0.2 943,120 - ABI39_RS03255 0.50 -0.5 943,194 - ABI39_RS03255 0.60 -0.4 943,194 - ABI39_RS03255 0.60 +1.2 943,483 - +0.7
Or see this region's nucleotide sequence