Experiment: T6 MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00804 and OHPLBJKB_00805 are separated by 299 nucleotides OHPLBJKB_00805 and OHPLBJKB_00806 are separated by 167 nucleotides OHPLBJKB_00806 and OHPLBJKB_00807 are separated by 25 nucleotides
OHPLBJKB_00804: OHPLBJKB_00804 - 5-formyltetrahydrofolate cyclo-ligase, at 826,601 to 827,149
_00804
OHPLBJKB_00805: OHPLBJKB_00805 - Cell division protein ZapA, at 827,449 to 827,778
_00805
OHPLBJKB_00806: OHPLBJKB_00806 - hypothetical protein, at 827,946 to 828,524
_00806
OHPLBJKB_00807: OHPLBJKB_00807 - Xaa-Pro aminopeptidase, at 828,550 to 829,875
_00807
Position (kb) 827
828
829 Strain fitness (log2 ratio) -2
-1
0
1
2 at 826.959 kb on + strand, within OHPLBJKB_00804 at 826.959 kb on + strand, within OHPLBJKB_00804 at 826.959 kb on + strand, within OHPLBJKB_00804 at 826.959 kb on + strand, within OHPLBJKB_00804 at 826.959 kb on + strand, within OHPLBJKB_00804 at 826.962 kb on - strand, within OHPLBJKB_00804 at 826.991 kb on + strand, within OHPLBJKB_00804 at 826.991 kb on + strand, within OHPLBJKB_00804 at 826.991 kb on + strand, within OHPLBJKB_00804 at 826.991 kb on + strand, within OHPLBJKB_00804 at 826.991 kb on + strand, within OHPLBJKB_00804 at 826.992 kb on - strand, within OHPLBJKB_00804 at 827.033 kb on + strand, within OHPLBJKB_00804 at 827.034 kb on - strand, within OHPLBJKB_00804 at 827.034 kb on - strand, within OHPLBJKB_00804 at 827.043 kb on + strand, within OHPLBJKB_00804 at 827.044 kb on + strand, within OHPLBJKB_00804 at 827.044 kb on + strand, within OHPLBJKB_00804 at 827.044 kb on + strand, within OHPLBJKB_00804 at 827.045 kb on - strand, within OHPLBJKB_00804 at 827.045 kb on - strand, within OHPLBJKB_00804 at 827.045 kb on - strand, within OHPLBJKB_00804 at 827.045 kb on - strand, within OHPLBJKB_00804 at 827.045 kb on - strand, within OHPLBJKB_00804 at 827.045 kb on - strand, within OHPLBJKB_00804 at 827.045 kb on - strand, within OHPLBJKB_00804 at 827.045 kb on - strand, within OHPLBJKB_00804 at 827.045 kb on - strand, within OHPLBJKB_00804 at 827.067 kb on + strand, within OHPLBJKB_00804 at 827.068 kb on - strand, within OHPLBJKB_00804 at 827.172 kb on - strand at 827.174 kb on + strand at 827.175 kb on - strand at 827.175 kb on - strand at 827.192 kb on + strand at 827.192 kb on + strand at 827.192 kb on + strand at 827.298 kb on - strand at 827.357 kb on - strand at 827.427 kb on + strand at 827.428 kb on - strand at 827.435 kb on + strand at 827.435 kb on + strand at 827.436 kb on - strand at 827.497 kb on + strand, within OHPLBJKB_00805 at 827.509 kb on + strand, within OHPLBJKB_00805 at 827.509 kb on + strand, within OHPLBJKB_00805 at 827.509 kb on + strand, within OHPLBJKB_00805 at 827.509 kb on + strand, within OHPLBJKB_00805 at 827.509 kb on + strand, within OHPLBJKB_00805 at 827.509 kb on + strand, within OHPLBJKB_00805 at 827.509 kb on + strand, within OHPLBJKB_00805 at 827.510 kb on - strand, within OHPLBJKB_00805 at 827.510 kb on - strand, within OHPLBJKB_00805 at 827.510 kb on - strand, within OHPLBJKB_00805 at 827.510 kb on - strand, within OHPLBJKB_00805 at 827.510 kb on - strand, within OHPLBJKB_00805 at 827.510 kb on - strand, within OHPLBJKB_00805 at 827.544 kb on + strand, within OHPLBJKB_00805 at 827.545 kb on - strand, within OHPLBJKB_00805 at 827.545 kb on - strand, within OHPLBJKB_00805 at 827.545 kb on - strand, within OHPLBJKB_00805 at 827.545 kb on - strand, within OHPLBJKB_00805 at 827.584 kb on + strand, within OHPLBJKB_00805 at 827.591 kb on + strand, within OHPLBJKB_00805 at 827.631 kb on + strand, within OHPLBJKB_00805 at 827.632 kb on - strand, within OHPLBJKB_00805 at 827.632 kb on - strand, within OHPLBJKB_00805 at 827.644 kb on - strand, within OHPLBJKB_00805 at 827.846 kb on + strand at 827.846 kb on + strand at 827.846 kb on + strand at 827.846 kb on + strand at 827.847 kb on - strand at 827.847 kb on - strand at 827.847 kb on - strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.848 kb on + strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.849 kb on - strand at 827.910 kb on + strand at 827.911 kb on - strand at 827.911 kb on - strand at 827.911 kb on - strand at 827.911 kb on - strand at 827.919 kb on + strand at 827.920 kb on - strand at 827.920 kb on - strand at 827.920 kb on - strand at 827.945 kb on + strand at 827.945 kb on + strand at 827.945 kb on + strand at 827.945 kb on + strand at 827.945 kb on + strand at 827.945 kb on + strand at 827.945 kb on + strand at 827.946 kb on - strand at 827.946 kb on - strand at 827.946 kb on - strand at 827.946 kb on - strand at 827.946 kb on - strand at 827.946 kb on - strand at 827.946 kb on - strand at 827.946 kb on - strand at 827.951 kb on + strand at 827.952 kb on - strand at 827.952 kb on - strand at 827.953 kb on + strand at 827.973 kb on + strand at 827.991 kb on + strand at 828.041 kb on - strand, within OHPLBJKB_00806 at 828.055 kb on + strand, within OHPLBJKB_00806 at 828.055 kb on + strand, within OHPLBJKB_00806 at 828.056 kb on - strand, within OHPLBJKB_00806 at 828.056 kb on - strand, within OHPLBJKB_00806 at 828.152 kb on + strand, within OHPLBJKB_00806 at 828.153 kb on - strand, within OHPLBJKB_00806 at 828.210 kb on + strand, within OHPLBJKB_00806 at 828.211 kb on - strand, within OHPLBJKB_00806 at 828.345 kb on - strand, within OHPLBJKB_00806 at 828.345 kb on - strand, within OHPLBJKB_00806 at 828.436 kb on - strand, within OHPLBJKB_00806 at 828.457 kb on + strand, within OHPLBJKB_00806 at 828.473 kb on + strand at 828.473 kb on + strand at 828.517 kb on + strand at 828.518 kb on - strand at 828.518 kb on - strand at 828.537 kb on + strand at 828.650 kb on + strand at 828.703 kb on + strand, within OHPLBJKB_00807 at 828.703 kb on + strand, within OHPLBJKB_00807 at 828.904 kb on + strand, within OHPLBJKB_00807 at 828.952 kb on + strand, within OHPLBJKB_00807 at 828.958 kb on + strand, within OHPLBJKB_00807 at 829.237 kb on + strand, within OHPLBJKB_00807 at 829.237 kb on + strand, within OHPLBJKB_00807 at 829.239 kb on + strand, within OHPLBJKB_00807 at 829.282 kb on + strand, within OHPLBJKB_00807 at 829.282 kb on + strand, within OHPLBJKB_00807 at 829.354 kb on + strand, within OHPLBJKB_00807
Per-strain Table
Position Strand Gene LocusTag Fraction T6 MOI1 remove 826,959 + OHPLBJKB_00804 0.65 -0.1 826,959 + OHPLBJKB_00804 0.65 -0.5 826,959 + OHPLBJKB_00804 0.65 -0.9 826,959 + OHPLBJKB_00804 0.65 +0.3 826,959 + OHPLBJKB_00804 0.65 -0.2 826,962 - OHPLBJKB_00804 0.66 +0.5 826,991 + OHPLBJKB_00804 0.71 -0.7 826,991 + OHPLBJKB_00804 0.71 -0.3 826,991 + OHPLBJKB_00804 0.71 +0.4 826,991 + OHPLBJKB_00804 0.71 -1.6 826,991 + OHPLBJKB_00804 0.71 +0.2 826,992 - OHPLBJKB_00804 0.71 +0.3 827,033 + OHPLBJKB_00804 0.79 +1.4 827,034 - OHPLBJKB_00804 0.79 -0.7 827,034 - OHPLBJKB_00804 0.79 +0.5 827,043 + OHPLBJKB_00804 0.81 +0.5 827,044 + OHPLBJKB_00804 0.81 -1.0 827,044 + OHPLBJKB_00804 0.81 +0.2 827,044 + OHPLBJKB_00804 0.81 -0.7 827,045 - OHPLBJKB_00804 0.81 +1.4 827,045 - OHPLBJKB_00804 0.81 -0.3 827,045 - OHPLBJKB_00804 0.81 +0.4 827,045 - OHPLBJKB_00804 0.81 +0.3 827,045 - OHPLBJKB_00804 0.81 -0.1 827,045 - OHPLBJKB_00804 0.81 +0.6 827,045 - OHPLBJKB_00804 0.81 -0.9 827,045 - OHPLBJKB_00804 0.81 +0.1 827,045 - OHPLBJKB_00804 0.81 +0.2 827,067 + OHPLBJKB_00804 0.85 -1.0 827,068 - OHPLBJKB_00804 0.85 -0.2 827,172 - -1.0 827,174 + -0.1 827,175 - -1.5 827,175 - -0.7 827,192 + +0.5 827,192 + +0.1 827,192 + -0.4 827,298 - -0.4 827,357 - -0.2 827,427 + +0.5 827,428 - -0.4 827,435 + +0.1 827,435 + -1.1 827,436 - +0.1 827,497 + OHPLBJKB_00805 0.15 -1.0 827,509 + OHPLBJKB_00805 0.18 +1.3 827,509 + OHPLBJKB_00805 0.18 -1.0 827,509 + OHPLBJKB_00805 0.18 +1.0 827,509 + OHPLBJKB_00805 0.18 -0.2 827,509 + OHPLBJKB_00805 0.18 -0.1 827,509 + OHPLBJKB_00805 0.18 +0.6 827,509 + OHPLBJKB_00805 0.18 +0.7 827,510 - OHPLBJKB_00805 0.18 +0.2 827,510 - OHPLBJKB_00805 0.18 -0.1 827,510 - OHPLBJKB_00805 0.18 +0.8 827,510 - OHPLBJKB_00805 0.18 -1.3 827,510 - OHPLBJKB_00805 0.18 -0.2 827,510 - OHPLBJKB_00805 0.18 -0.2 827,544 + OHPLBJKB_00805 0.29 -0.1 827,545 - OHPLBJKB_00805 0.29 +0.5 827,545 - OHPLBJKB_00805 0.29 +0.8 827,545 - OHPLBJKB_00805 0.29 -0.3 827,545 - OHPLBJKB_00805 0.29 +0.3 827,584 + OHPLBJKB_00805 0.41 -0.8 827,591 + OHPLBJKB_00805 0.43 -1.2 827,631 + OHPLBJKB_00805 0.55 +1.1 827,632 - OHPLBJKB_00805 0.55 -0.5 827,632 - OHPLBJKB_00805 0.55 +0.2 827,644 - OHPLBJKB_00805 0.59 +0.8 827,846 + +0.4 827,846 + +0.8 827,846 + +0.5 827,846 + +1.0 827,847 - -0.4 827,847 - +0.5 827,847 - +0.5 827,848 + +0.3 827,848 + -1.1 827,848 + +1.1 827,848 + -0.9 827,848 + -0.2 827,848 + +0.9 827,848 + +0.2 827,848 + +1.0 827,848 + -1.0 827,848 + -1.0 827,848 + +0.6 827,848 + +0.5 827,848 + +1.4 827,848 + +0.9 827,848 + -0.2 827,849 - +0.4 827,849 - +0.0 827,849 - +0.4 827,849 - +0.7 827,849 - +0.4 827,849 - +0.3 827,849 - -0.2 827,849 - -0.6 827,849 - +0.8 827,849 - -0.4 827,849 - -1.8 827,849 - -1.2 827,849 - -0.5 827,849 - +0.4 827,849 - +0.8 827,849 - +0.1 827,849 - -0.1 827,849 - +0.3 827,849 - +0.3 827,910 + -0.3 827,911 - +0.8 827,911 - +0.6 827,911 - -0.2 827,911 - -1.9 827,919 + -0.3 827,920 - +0.0 827,920 - +0.8 827,920 - -0.2 827,945 + +0.6 827,945 + +0.3 827,945 + +0.3 827,945 + +0.8 827,945 + +0.3 827,945 + -1.9 827,945 + -0.3 827,946 - +0.6 827,946 - +2.3 827,946 - -1.0 827,946 - +1.0 827,946 - +0.3 827,946 - -2.1 827,946 - +0.0 827,946 - -0.2 827,951 + +0.0 827,952 - -1.3 827,952 - +0.3 827,953 + -0.1 827,973 + -0.7 827,991 + +0.4 828,041 - OHPLBJKB_00806 0.16 -0.2 828,055 + OHPLBJKB_00806 0.19 -0.2 828,055 + OHPLBJKB_00806 0.19 +0.4 828,056 - OHPLBJKB_00806 0.19 -1.2 828,056 - OHPLBJKB_00806 0.19 +1.8 828,152 + OHPLBJKB_00806 0.36 +0.0 828,153 - OHPLBJKB_00806 0.36 -1.5 828,210 + OHPLBJKB_00806 0.46 -1.1 828,211 - OHPLBJKB_00806 0.46 -1.1 828,345 - OHPLBJKB_00806 0.69 -1.2 828,345 - OHPLBJKB_00806 0.69 +0.0 828,436 - OHPLBJKB_00806 0.85 -0.7 828,457 + OHPLBJKB_00806 0.88 -0.0 828,473 + -0.9 828,473 + +0.3 828,517 + -0.1 828,518 - +0.5 828,518 - +0.1 828,537 + -0.6 828,650 + +0.0 828,703 + OHPLBJKB_00807 0.12 +0.1 828,703 + OHPLBJKB_00807 0.12 +1.8 828,904 + OHPLBJKB_00807 0.27 +1.1 828,952 + OHPLBJKB_00807 0.30 -0.7 828,958 + OHPLBJKB_00807 0.31 +0.8 829,237 + OHPLBJKB_00807 0.52 -0.5 829,237 + OHPLBJKB_00807 0.52 -0.2 829,239 + OHPLBJKB_00807 0.52 +0.5 829,282 + OHPLBJKB_00807 0.55 -0.2 829,282 + OHPLBJKB_00807 0.55 +0.3 829,354 + OHPLBJKB_00807 0.61 +0.3
Or see this region's nucleotide sequence