Experiment: B-glucan from yeast (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS20680 and ABI39_RS20685 are separated by 367 nucleotides ABI39_RS20685 and ABI39_RS20690 are separated by 40 nucleotides
ABI39_RS20680: ABI39_RS20680 - glutamine--fructose-6-phosphate transaminase (isomerizing), at 5,100,057 to 5,101,901
_RS20680
ABI39_RS20685: ABI39_RS20685 - glutamate synthase large subunit, at 5,102,269 to 5,106,747
_RS20685
ABI39_RS20690: ABI39_RS20690 - glutamate synthase subunit beta, at 5,106,788 to 5,108,128
_RS20690
Position (kb) 5102
5103
5104
5105
5106
5107 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5101.292 kb on + strand, within ABI39_RS20680 at 5101.350 kb on + strand, within ABI39_RS20680 at 5101.382 kb on + strand, within ABI39_RS20680 at 5101.473 kb on + strand, within ABI39_RS20680 at 5101.533 kb on - strand, within ABI39_RS20680 at 5101.608 kb on - strand, within ABI39_RS20680 at 5101.788 kb on - strand at 5101.825 kb on + strand at 5101.848 kb on + strand at 5101.902 kb on - strand at 5101.911 kb on - strand at 5101.914 kb on + strand at 5101.915 kb on - strand at 5101.915 kb on - strand at 5101.940 kb on + strand at 5101.968 kb on - strand at 5102.101 kb on + strand at 5102.135 kb on - strand at 5102.256 kb on - strand at 5102.330 kb on + strand at 5102.330 kb on + strand at 5102.334 kb on + strand at 5102.461 kb on - strand at 5102.466 kb on - strand at 5102.580 kb on - strand at 5102.584 kb on - strand at 5102.600 kb on + strand at 5102.742 kb on + strand, within ABI39_RS20685 at 5102.750 kb on - strand, within ABI39_RS20685 at 5102.827 kb on - strand, within ABI39_RS20685 at 5102.890 kb on + strand, within ABI39_RS20685 at 5102.916 kb on - strand, within ABI39_RS20685 at 5103.217 kb on - strand, within ABI39_RS20685 at 5103.628 kb on - strand, within ABI39_RS20685 at 5103.677 kb on + strand, within ABI39_RS20685 at 5103.933 kb on - strand, within ABI39_RS20685 at 5104.098 kb on + strand, within ABI39_RS20685 at 5104.107 kb on - strand, within ABI39_RS20685 at 5104.375 kb on - strand, within ABI39_RS20685 at 5104.402 kb on - strand, within ABI39_RS20685 at 5104.422 kb on + strand, within ABI39_RS20685 at 5104.487 kb on + strand, within ABI39_RS20685 at 5104.530 kb on + strand, within ABI39_RS20685 at 5105.019 kb on - strand, within ABI39_RS20685 at 5105.135 kb on + strand, within ABI39_RS20685 at 5105.400 kb on + strand, within ABI39_RS20685 at 5105.586 kb on - strand, within ABI39_RS20685 at 5105.685 kb on + strand, within ABI39_RS20685 at 5105.686 kb on - strand, within ABI39_RS20685 at 5105.689 kb on + strand, within ABI39_RS20685 at 5105.690 kb on - strand, within ABI39_RS20685 at 5105.690 kb on - strand, within ABI39_RS20685 at 5105.701 kb on + strand, within ABI39_RS20685 at 5105.879 kb on + strand, within ABI39_RS20685 at 5105.919 kb on - strand, within ABI39_RS20685 at 5106.087 kb on + strand, within ABI39_RS20685 at 5106.210 kb on - strand, within ABI39_RS20685 at 5106.388 kb on + strand at 5106.390 kb on + strand at 5106.466 kb on + strand at 5106.466 kb on + strand at 5106.584 kb on - strand at 5106.641 kb on + strand at 5106.869 kb on - strand at 5107.025 kb on + strand, within ABI39_RS20690 at 5107.033 kb on - strand, within ABI39_RS20690 at 5107.185 kb on - strand, within ABI39_RS20690 at 5107.527 kb on + strand, within ABI39_RS20690
Per-strain Table
Position Strand Gene LocusTag Fraction B-glucan from yeast (C) remove 5,101,292 + ABI39_RS20680 0.67 +0.8 5,101,350 + ABI39_RS20680 0.70 +0.4 5,101,382 + ABI39_RS20680 0.72 -0.8 5,101,473 + ABI39_RS20680 0.77 +1.4 5,101,533 - ABI39_RS20680 0.80 +1.3 5,101,608 - ABI39_RS20680 0.84 +1.0 5,101,788 - +0.7 5,101,825 + -0.1 5,101,848 + +0.5 5,101,902 - -0.4 5,101,911 - +0.9 5,101,914 + -0.6 5,101,915 - +0.5 5,101,915 - +0.5 5,101,940 + +0.1 5,101,968 - -0.5 5,102,101 + +3.1 5,102,135 - -0.1 5,102,256 - -1.1 5,102,330 + +0.6 5,102,330 + +1.5 5,102,334 + +0.2 5,102,461 - -0.2 5,102,466 - -0.0 5,102,580 - -1.0 5,102,584 - +0.1 5,102,600 + -1.9 5,102,742 + ABI39_RS20685 0.11 -0.4 5,102,750 - ABI39_RS20685 0.11 -0.3 5,102,827 - ABI39_RS20685 0.12 +0.2 5,102,890 + ABI39_RS20685 0.14 -0.6 5,102,916 - ABI39_RS20685 0.14 +0.4 5,103,217 - ABI39_RS20685 0.21 -0.2 5,103,628 - ABI39_RS20685 0.30 +0.8 5,103,677 + ABI39_RS20685 0.31 -0.9 5,103,933 - ABI39_RS20685 0.37 -0.3 5,104,098 + ABI39_RS20685 0.41 +0.2 5,104,107 - ABI39_RS20685 0.41 -0.4 5,104,375 - ABI39_RS20685 0.47 +0.4 5,104,402 - ABI39_RS20685 0.48 +0.7 5,104,422 + ABI39_RS20685 0.48 +1.0 5,104,487 + ABI39_RS20685 0.50 +2.0 5,104,530 + ABI39_RS20685 0.50 +0.2 5,105,019 - ABI39_RS20685 0.61 +0.9 5,105,135 + ABI39_RS20685 0.64 +0.3 5,105,400 + ABI39_RS20685 0.70 +0.2 5,105,586 - ABI39_RS20685 0.74 -1.3 5,105,685 + ABI39_RS20685 0.76 -0.7 5,105,686 - ABI39_RS20685 0.76 +0.9 5,105,689 + ABI39_RS20685 0.76 +0.3 5,105,690 - ABI39_RS20685 0.76 +0.9 5,105,690 - ABI39_RS20685 0.76 +0.6 5,105,701 + ABI39_RS20685 0.77 +0.0 5,105,879 + ABI39_RS20685 0.81 +0.9 5,105,919 - ABI39_RS20685 0.81 +0.4 5,106,087 + ABI39_RS20685 0.85 +0.4 5,106,210 - ABI39_RS20685 0.88 +0.3 5,106,388 + +0.2 5,106,390 + +0.2 5,106,466 + +0.4 5,106,466 + +1.0 5,106,584 - +0.2 5,106,641 + -1.2 5,106,869 - -0.3 5,107,025 + ABI39_RS20690 0.18 -2.2 5,107,033 - ABI39_RS20690 0.18 +0.4 5,107,185 - ABI39_RS20690 0.30 -0.9 5,107,527 + ABI39_RS20690 0.55 -0.4
Or see this region's nucleotide sequence