Experiment: B-glucan from yeast (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS00230 and ABI39_RS00235 are separated by 2 nucleotides ABI39_RS00235 and ABI39_RS00240 are separated by 157 nucleotides
ABI39_RS00230: ABI39_RS00230 - porin family protein, at 64,723 to 66,018
_RS00230
ABI39_RS00235: ABI39_RS00235 - sigma-70 family RNA polymerase sigma factor, at 66,021 to 66,563
_RS00235
ABI39_RS00240: ABI39_RS00240 - NigD-like N-terminal domain-containing protein, at 66,721 to 67,503
_RS00240
Position (kb) 66
67 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 66.076 kb on + strand, within ABI39_RS00235 at 66.078 kb on + strand, within ABI39_RS00235 at 66.079 kb on - strand, within ABI39_RS00235 at 66.095 kb on + strand, within ABI39_RS00235 at 66.096 kb on - strand, within ABI39_RS00235 at 66.096 kb on - strand, within ABI39_RS00235 at 66.131 kb on + strand, within ABI39_RS00235 at 66.150 kb on + strand, within ABI39_RS00235 at 66.156 kb on + strand, within ABI39_RS00235 at 66.173 kb on + strand, within ABI39_RS00235 at 66.173 kb on + strand, within ABI39_RS00235 at 66.173 kb on + strand, within ABI39_RS00235 at 66.174 kb on - strand, within ABI39_RS00235 at 66.276 kb on + strand, within ABI39_RS00235 at 66.338 kb on + strand, within ABI39_RS00235 at 66.374 kb on + strand, within ABI39_RS00235 at 66.402 kb on + strand, within ABI39_RS00235 at 66.423 kb on + strand, within ABI39_RS00235 at 66.424 kb on - strand, within ABI39_RS00235 at 66.455 kb on + strand, within ABI39_RS00235 at 66.456 kb on - strand, within ABI39_RS00235 at 66.458 kb on - strand, within ABI39_RS00235 at 66.588 kb on + strand at 66.589 kb on - strand at 66.595 kb on + strand at 66.673 kb on + strand at 66.676 kb on + strand at 66.688 kb on + strand at 66.733 kb on - strand at 66.752 kb on + strand at 66.799 kb on + strand at 66.815 kb on - strand, within ABI39_RS00240 at 66.988 kb on - strand, within ABI39_RS00240 at 66.991 kb on + strand, within ABI39_RS00240 at 67.398 kb on + strand, within ABI39_RS00240 at 67.438 kb on - strand at 67.438 kb on - strand at 67.470 kb on - strand at 67.479 kb on + strand at 67.481 kb on + strand at 67.528 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction B-glucan from yeast (C) remove 66,076 + ABI39_RS00235 0.10 +0.6 66,078 + ABI39_RS00235 0.10 +0.8 66,079 - ABI39_RS00235 0.11 -0.2 66,095 + ABI39_RS00235 0.14 +1.3 66,096 - ABI39_RS00235 0.14 +1.0 66,096 - ABI39_RS00235 0.14 +0.0 66,131 + ABI39_RS00235 0.20 +0.4 66,150 + ABI39_RS00235 0.24 +1.0 66,156 + ABI39_RS00235 0.25 +0.1 66,173 + ABI39_RS00235 0.28 +0.2 66,173 + ABI39_RS00235 0.28 +1.2 66,173 + ABI39_RS00235 0.28 +0.9 66,174 - ABI39_RS00235 0.28 -1.6 66,276 + ABI39_RS00235 0.47 +1.0 66,338 + ABI39_RS00235 0.58 -0.5 66,374 + ABI39_RS00235 0.65 -0.5 66,402 + ABI39_RS00235 0.70 +0.3 66,423 + ABI39_RS00235 0.74 -0.1 66,424 - ABI39_RS00235 0.74 -0.3 66,455 + ABI39_RS00235 0.80 -0.4 66,456 - ABI39_RS00235 0.80 +1.1 66,458 - ABI39_RS00235 0.80 -0.1 66,588 + +0.4 66,589 - -0.6 66,595 + +0.4 66,673 + -0.4 66,676 + -0.2 66,688 + -1.1 66,733 - -2.0 66,752 + -3.3 66,799 + -2.8 66,815 - ABI39_RS00240 0.12 -3.7 66,988 - ABI39_RS00240 0.34 -3.3 66,991 + ABI39_RS00240 0.34 -4.6 67,398 + ABI39_RS00240 0.86 -3.9 67,438 - +0.2 67,438 - +1.2 67,470 - +0.3 67,479 + +0.5 67,481 + -0.2 67,528 + +0.2
Or see this region's nucleotide sequence