Strain Fitness in Escherichia coli ECOR38 around HEPCGN_13810

Experiment: Bas55

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas55
1,509,429	+	ibpA	HEPCGN_13800	0.48	-0.1
1,509,481	+	ibpA	HEPCGN_13800	0.61	-0.1
1,509,481	+	ibpA	HEPCGN_13800	0.61	+0.0
1,509,481	+	ibpA	HEPCGN_13800	0.61	-2.4
1,509,481	+	ibpA	HEPCGN_13800	0.61	-0.5
1,509,482	-	ibpA	HEPCGN_13800	0.61	-0.1
1,509,488	-	ibpA	HEPCGN_13800	0.63	+0.1
1,509,530	+	ibpA	HEPCGN_13800	0.73	+0.5
1,509,531	-	ibpA	HEPCGN_13800	0.73	-1.7
1,509,558	+	ibpA	HEPCGN_13800	0.79	+0.3
1,509,580	+	ibpA	HEPCGN_13800	0.85	+0.9
1,509,580	+	ibpA	HEPCGN_13800	0.85	-1.1
1,509,581	-	ibpA	HEPCGN_13800	0.85	+1.6
1,509,581	-	ibpA	HEPCGN_13800	0.85	-0.4
1,509,581	-	ibpA	HEPCGN_13800	0.85	-0.2
1,509,581	-	ibpA	HEPCGN_13800	0.85	+0.3
1,509,581	-	ibpA	HEPCGN_13800	0.85	-0.4
1,509,640	+				-0.4
1,509,698	+				-0.7
1,509,723	-				+0.2
1,509,737	+				-1.5
1,509,738	-				+0.5
1,509,770	+				+0.3
1,509,895	-	ibpB	HEPCGN_13805	0.33	-0.5
1,510,017	+	ibpB	HEPCGN_13805	0.61	-0.1
1,510,017	+	ibpB	HEPCGN_13805	0.61	+0.3
1,510,094	+	ibpB	HEPCGN_13805	0.79	+0.0
1,510,102	-	ibpB	HEPCGN_13805	0.81	-0.3
1,510,109	+	ibpB	HEPCGN_13805	0.83	-0.2
1,510,110	-	ibpB	HEPCGN_13805	0.83	-0.8
1,510,146	+				+0.2
1,510,146	+				-0.2
1,510,148	+				+1.0
1,510,148	+				+0.5
1,510,148	+				-0.0
1,510,148	+				-1.1
1,510,149	-				+0.1
1,510,149	-				+0.8
1,510,152	+				-0.9
1,510,152	+				-0.2
1,510,176	+				+0.5
1,510,176	+				-0.2
1,510,176	+				+1.2
1,510,177	-				-0.2
1,510,177	-				+2.3
1,510,177	-				+0.4
1,510,180	+				-0.7
1,510,180	+				-0.2
1,510,184	+				+1.0
1,510,184	+				+0.2
1,510,184	+				+0.2
1,510,185	-				-1.5
1,510,185	-				+0.9
1,510,189	-				+1.0
1,510,189	-				-1.0
1,510,189	-				+0.3
1,510,189	-				+1.6
1,510,189	-				-0.0
1,510,294	+				+0.9
1,510,295	-				-0.5
1,510,295	-				-0.2
1,510,305	-				-1.5
1,510,386	+				-1.4
1,510,387	-				+0.5
1,510,388	+				+0.8
1,510,388	+				+0.6
1,510,388	+				+0.3
1,510,388	+				-0.2
1,510,469	+				+1.0
1,510,469	+				+0.2
1,510,469	+				+0.0
1,510,469	+				-0.2
1,510,469	+				-0.1
1,510,470	-				+0.0
1,510,473	+				+0.4
1,510,538	+				-0.2
1,510,538	+				-0.2
1,510,538	+				-0.1
1,510,538	+				-0.1
1,510,539	-				+0.1
1,510,539	-				-2.0
1,510,539	-				-0.1
1,510,542	+				-1.1
1,510,543	-				-0.4
1,510,591	+	yidE	HEPCGN_13810	0.13	+0.2
1,510,591	+	yidE	HEPCGN_13810	0.13	-2.3
1,510,592	-	yidE	HEPCGN_13810	0.13	+0.3
1,510,592	-	yidE	HEPCGN_13810	0.13	+0.2
1,510,592	-	yidE	HEPCGN_13810	0.13	+0.1
1,510,649	+	yidE	HEPCGN_13810	0.16	-1.3
1,510,713	+	yidE	HEPCGN_13810	0.20	-0.6
1,510,713	+	yidE	HEPCGN_13810	0.20	+0.5
1,510,773	+	yidE	HEPCGN_13810	0.24	-0.1
1,510,855	+	yidE	HEPCGN_13810	0.29	-0.3
1,510,879	-	yidE	HEPCGN_13810	0.30	+0.5
1,510,995	+	yidE	HEPCGN_13810	0.37	+0.1
1,510,996	-	yidE	HEPCGN_13810	0.37	+0.6
1,510,996	-	yidE	HEPCGN_13810	0.37	+0.4
1,511,020	-	yidE	HEPCGN_13810	0.39	+0.7
1,511,033	+	yidE	HEPCGN_13810	0.39	-1.0
1,511,033	+	yidE	HEPCGN_13810	0.39	+0.4
1,511,074	-	yidE	HEPCGN_13810	0.42	+0.9
1,511,124	+	yidE	HEPCGN_13810	0.45	+0.2
1,511,124	+	yidE	HEPCGN_13810	0.45	+0.6
1,511,125	-	yidE	HEPCGN_13810	0.45	+0.1
1,511,177	+	yidE	HEPCGN_13810	0.48	-0.1
1,511,181	+	yidE	HEPCGN_13810	0.48	-1.2
1,511,182	-	yidE	HEPCGN_13810	0.48	-0.5
1,511,292	+	yidE	HEPCGN_13810	0.55	-0.1
1,511,321	-	yidE	HEPCGN_13810	0.57	+0.8
1,511,331	+	yidE	HEPCGN_13810	0.57	+0.0
1,511,331	+	yidE	HEPCGN_13810	0.57	+0.2
1,511,522	+	yidE	HEPCGN_13810	0.69	-0.0
1,511,523	-	yidE	HEPCGN_13810	0.69	+2.1
1,511,529	-	yidE	HEPCGN_13810	0.69	+0.8
1,511,529	-	yidE	HEPCGN_13810	0.69	-0.4
1,511,535	+	yidE	HEPCGN_13810	0.70	-0.6
1,511,536	-	yidE	HEPCGN_13810	0.70	+0.3
1,511,536	-	yidE	HEPCGN_13810	0.70	-0.5
1,511,536	-	yidE	HEPCGN_13810	0.70	-0.1
1,511,601	+	yidE	HEPCGN_13810	0.74	+2.3
1,511,645	-	yidE	HEPCGN_13810	0.76	-1.2
1,511,652	+	yidE	HEPCGN_13810	0.77	+0.3
1,511,696	+	yidE	HEPCGN_13810	0.79	+1.5
1,511,696	+	yidE	HEPCGN_13810	0.79	+0.2
1,511,696	+	yidE	HEPCGN_13810	0.79	+0.1
1,511,697	-	yidE	HEPCGN_13810	0.79	+0.3
1,511,697	-	yidE	HEPCGN_13810	0.79	+0.4
1,511,741	+	yidE	HEPCGN_13810	0.82	+0.7
1,511,741	+	yidE	HEPCGN_13810	0.82	+0.6
1,511,741	+	yidE	HEPCGN_13810	0.82	+0.4
1,511,745	+	yidE	HEPCGN_13810	0.82	+0.3
1,511,745	+	yidE	HEPCGN_13810	0.82	+0.0
1,511,746	-	yidE	HEPCGN_13810	0.82	-0.4
1,511,768	+	yidE	HEPCGN_13810	0.84	+0.5
1,511,814	+	yidE	HEPCGN_13810	0.86	+0.4
1,511,815	-	yidE	HEPCGN_13810	0.86	-0.7
1,511,823	+	yidE	HEPCGN_13810	0.87	+0.2
1,511,916	+				-0.9
1,511,917	-				-0.7
1,511,917	-				-0.9
1,512,008	+				+1.3
1,512,008	+				+1.3
1,512,008	+				+2.3
1,512,009	-				-0.4
1,512,009	-				-0.1
1,512,009	-				-0.5
1,512,009	-				-0.1
1,512,064	-				+0.3
1,512,071	-				-0.7
1,512,082	+				+0.3
1,512,180	+	yidP	HEPCGN_13815	0.20	-0.4
1,512,236	-	yidP	HEPCGN_13815	0.28	+0.6
1,512,239	+	yidP	HEPCGN_13815	0.28	-0.2
1,512,272	+	yidP	HEPCGN_13815	0.33	-0.1
1,512,273	-	yidP	HEPCGN_13815	0.33	-0.1
1,512,275	-	yidP	HEPCGN_13815	0.33	+0.6
1,512,335	+	yidP	HEPCGN_13815	0.42	+0.1
1,512,335	+	yidP	HEPCGN_13815	0.42	-1.1
1,512,336	-	yidP	HEPCGN_13815	0.42	+0.6
1,512,337	+	yidP	HEPCGN_13815	0.42	-0.1
1,512,337	+	yidP	HEPCGN_13815	0.42	-1.0
1,512,337	+	yidP	HEPCGN_13815	0.42	+0.1
1,512,337	+	yidP	HEPCGN_13815	0.42	+1.1
1,512,337	+	yidP	HEPCGN_13815	0.42	+0.5
1,512,337	+	yidP	HEPCGN_13815	0.42	+1.2
1,512,337	+	yidP	HEPCGN_13815	0.42	-0.8
1,512,337	+	yidP	HEPCGN_13815	0.42	+0.4
1,512,338	-	yidP	HEPCGN_13815	0.42	-0.5
1,512,338	-	yidP	HEPCGN_13815	0.42	+0.1
1,512,338	-	yidP	HEPCGN_13815	0.42	+0.0
1,512,338	-	yidP	HEPCGN_13815	0.42	-0.3
1,512,338	-	yidP	HEPCGN_13815	0.42	-0.8
1,512,338	-	yidP	HEPCGN_13815	0.42	-0.2
1,512,338	-	yidP	HEPCGN_13815	0.42	+0.1
1,512,502	-	yidP	HEPCGN_13815	0.65	+0.0
1,512,502	-	yidP	HEPCGN_13815	0.65	-0.9
1,512,543	+	yidP	HEPCGN_13815	0.71	+0.7
1,512,543	+	yidP	HEPCGN_13815	0.71	+0.0
1,512,543	+	yidP	HEPCGN_13815	0.71	-0.2
1,512,562	+	yidP	HEPCGN_13815	0.73	+0.0
1,512,562	+	yidP	HEPCGN_13815	0.73	-0.0
1,512,563	-	yidP	HEPCGN_13815	0.74	-0.3
1,512,567	-	yidP	HEPCGN_13815	0.74	+0.0
1,512,623	+	yidP	HEPCGN_13815	0.82	-0.2
1,512,710	+				-0.9
1,512,745	+				+0.8
1,512,745	+				+0.3
1,512,756	+				-0.4
1,512,757	-				+1.0
1,512,975	+				-0.1
1,513,017	-				-0.8
1,513,020	+				-0.7