Strain Fitness in Escherichia coli ECOR38 around HEPCGN_12020

Experiment: Bas55

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas55
1,143,077	-	thiC	HEPCGN_12010	0.81	-1.2
1,143,084	-	thiC	HEPCGN_12010	0.82	-0.3
1,143,193	+	thiC	HEPCGN_12010	0.87	-1.8
1,143,324	+				-0.1
1,143,324	+				-1.0
1,143,325	-				-0.1
1,143,325	-				+1.4
1,143,332	+				-0.4
1,143,332	+				+0.3
1,143,371	-				-0.9
1,143,456	-				-0.4
1,143,490	-				+0.1
1,143,494	+	thiE	HEPCGN_12015	0.10	+0.2
1,143,494	+	thiE	HEPCGN_12015	0.10	+1.7
1,143,495	-	thiE	HEPCGN_12015	0.10	+0.4
1,143,670	+	thiE	HEPCGN_12015	0.38	+0.6
1,143,671	-	thiE	HEPCGN_12015	0.38	+0.3
1,143,802	+	thiE	HEPCGN_12015	0.58	-0.7
1,143,802	+	thiE	HEPCGN_12015	0.58	-0.1
1,143,802	+	thiE	HEPCGN_12015	0.58	+0.6
1,143,803	-	thiE	HEPCGN_12015	0.59	+0.2
1,143,803	-	thiE	HEPCGN_12015	0.59	-0.0
1,143,804	+	thiE	HEPCGN_12015	0.59	-0.2
1,143,804	+	thiE	HEPCGN_12015	0.59	+0.3
1,143,805	-	thiE	HEPCGN_12015	0.59	-0.8
1,143,996	+	thiE	HEPCGN_12015	0.89	-0.4
1,143,997	-	thiE	HEPCGN_12015	0.89	-0.3
1,143,997	-	thiE	HEPCGN_12015	0.89	+0.1
1,144,082	+				-0.2
1,144,084	+				-0.8
1,144,085	-				+0.0
1,144,085	-				-0.0
1,144,193	+	thiF	HEPCGN_12020	0.18	+0.7
1,144,194	-	thiF	HEPCGN_12020	0.18	+0.5
1,144,224	+	thiF	HEPCGN_12020	0.22	+0.2
1,144,252	-	thiF	HEPCGN_12020	0.26	-0.3
1,144,279	+	thiF	HEPCGN_12020	0.29	+0.4
1,144,365	+	thiF	HEPCGN_12020	0.41	+0.5
1,144,365	+	thiF	HEPCGN_12020	0.41	-0.2
1,144,365	+	thiF	HEPCGN_12020	0.41	+0.3
1,144,366	-	thiF	HEPCGN_12020	0.41	+0.6
1,144,392	+	thiF	HEPCGN_12020	0.44	-0.8
1,144,392	+	thiF	HEPCGN_12020	0.44	-0.2
1,144,495	+	thiF	HEPCGN_12020	0.58	-0.4
1,144,496	-	thiF	HEPCGN_12020	0.58	+0.1
1,144,536	+	thiF	HEPCGN_12020	0.63	+0.0
1,144,646	-	thiF	HEPCGN_12020	0.78	-0.6
1,144,680	+	thiF	HEPCGN_12020	0.82	+1.2
1,144,691	-	thiF	HEPCGN_12020	0.84	-0.2
1,144,693	-	thiF	HEPCGN_12020	0.84	+0.1
1,144,693	-	thiF	HEPCGN_12020	0.84	+0.2
1,144,944	-	thiF	HEPCGN_12025	0.73	-0.5
1,144,944	-	thiF	HEPCGN_12025	0.73	-0.4
1,145,003	+				-0.4
1,145,007	+				+0.4
1,145,008	-				+1.2
1,145,203	-	thiG	HEPCGN_12030	0.26	-0.3
1,145,285	+	thiG	HEPCGN_12030	0.37	-0.3
1,145,441	+	thiG	HEPCGN_12030	0.57	+0.8
1,145,604	-	thiG	HEPCGN_12030	0.78	+0.6