Strain Fitness in Escherichia coli ECOR38 around HEPCGN_06740

Experiment: Bas55

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas55
79,393	+	fsr	HEPCGN_06735	0.61	+0.7
79,393	+	fsr	HEPCGN_06735	0.61	-0.5
79,393	+	fsr	HEPCGN_06735	0.61	-0.1
79,394	-	fsr	HEPCGN_06735	0.61	-0.3
79,397	-	fsr	HEPCGN_06735	0.61	+0.3
79,397	-	fsr	HEPCGN_06735	0.61	-0.3
79,620	+	fsr	HEPCGN_06735	0.80	-0.1
79,820	+				+0.5
80,008	-				-0.5
80,014	-				+1.2
80,043	-				-2.2
80,046	-				-1.8
80,128	-				+0.2
80,193	+				+0.5
80,194	-				+1.7
80,394	-	ybaL	HEPCGN_06740	0.17	+0.2
80,472	-	ybaL	HEPCGN_06740	0.22	+2.9
80,472	-	ybaL	HEPCGN_06740	0.22	-1.0
80,472	-	ybaL	HEPCGN_06740	0.22	+0.4
80,528	+	ybaL	HEPCGN_06740	0.25	+1.3
80,529	-	ybaL	HEPCGN_06740	0.25	-0.3
80,532	-	ybaL	HEPCGN_06740	0.25	+0.1
80,586	-	ybaL	HEPCGN_06740	0.29	+0.4
80,586	-	ybaL	HEPCGN_06740	0.29	+0.2
80,712	+	ybaL	HEPCGN_06740	0.36	-1.5
80,723	+	ybaL	HEPCGN_06740	0.37	+0.4
80,724	-	ybaL	HEPCGN_06740	0.37	-0.2
80,758	-	ybaL	HEPCGN_06740	0.39	+0.3
80,787	+	ybaL	HEPCGN_06740	0.41	+0.1
80,925	+	ybaL	HEPCGN_06740	0.49	+0.1
81,051	+	ybaL	HEPCGN_06740	0.56	-0.3
81,052	-	ybaL	HEPCGN_06740	0.56	+0.2
81,052	-	ybaL	HEPCGN_06740	0.56	+0.5
81,103	-	ybaL	HEPCGN_06740	0.59	+1.4
81,111	-	ybaL	HEPCGN_06740	0.60	+2.2
81,114	+	ybaL	HEPCGN_06740	0.60	-0.6
81,115	-	ybaL	HEPCGN_06740	0.60	-1.0
81,115	-	ybaL	HEPCGN_06740	0.60	+0.5
81,154	-	ybaL	HEPCGN_06740	0.62	+0.4
81,237	+	ybaL	HEPCGN_06740	0.67	-0.6
81,238	-	ybaL	HEPCGN_06740	0.67	+1.4
81,426	+	ybaL	HEPCGN_06740	0.79	+0.3
81,497	+	ybaL	HEPCGN_06740	0.83	-0.6
81,673	+				+0.9
81,673	+				+0.8
81,676	-				-0.6
81,729	+				+0.4
81,730	-				+0.3
81,730	-				-0.4
81,869	-				-0.3
81,869	-				+1.2
81,956	-				+0.0
81,973	+				+1.9
81,973	+				-0.1
81,973	+				+0.1
81,974	-				-0.5
81,974	-				-0.2
81,978	-				-0.6
82,005	+	gsk	HEPCGN_06745	0.11	-0.0
82,019	+	gsk	HEPCGN_06745	0.12	+0.6
82,019	+	gsk	HEPCGN_06745	0.12	+0.2
82,054	+	gsk	HEPCGN_06745	0.14	-1.1
82,054	+	gsk	HEPCGN_06745	0.14	-1.9
82,055	-	gsk	HEPCGN_06745	0.14	-0.1
82,055	-	gsk	HEPCGN_06745	0.14	+0.3
82,216	+	gsk	HEPCGN_06745	0.27	+2.2
82,265	+	gsk	HEPCGN_06745	0.30	-0.3
82,300	+	gsk	HEPCGN_06745	0.33	+0.1
82,300	+	gsk	HEPCGN_06745	0.33	+0.1
82,300	+	gsk	HEPCGN_06745	0.33	+0.4
82,300	+	gsk	HEPCGN_06745	0.33	-1.4
82,301	-	gsk	HEPCGN_06745	0.33	-0.6
82,301	-	gsk	HEPCGN_06745	0.33	+0.3
82,301	-	gsk	HEPCGN_06745	0.33	-0.8
82,366	-	gsk	HEPCGN_06745	0.38	-0.7
82,424	+	gsk	HEPCGN_06745	0.43	-0.7
82,510	-	gsk	HEPCGN_06745	0.49	+0.3
82,515	-	gsk	HEPCGN_06745	0.50	+0.4
82,517	-	gsk	HEPCGN_06745	0.50	+0.6
82,517	-	gsk	HEPCGN_06745	0.50	-1.0
82,588	+	gsk	HEPCGN_06745	0.55	-0.2
82,589	-	gsk	HEPCGN_06745	0.55	+0.9
82,713	-	gsk	HEPCGN_06745	0.65	+0.9
82,746	+	gsk	HEPCGN_06745	0.67	+0.1
82,747	-	gsk	HEPCGN_06745	0.67	+0.2
82,747	-	gsk	HEPCGN_06745	0.67	+0.4
82,747	-	gsk	HEPCGN_06745	0.67	-0.2
82,747	-	gsk	HEPCGN_06745	0.67	+0.6
82,747	-	gsk	HEPCGN_06745	0.67	-0.1
82,754	+	gsk	HEPCGN_06745	0.68	+0.9
82,755	-	gsk	HEPCGN_06745	0.68	+0.4
82,755	-	gsk	HEPCGN_06745	0.68	-1.0
82,776	-	gsk	HEPCGN_06745	0.70	+0.7
82,778	+	gsk	HEPCGN_06745	0.70	-0.7
82,778	+	gsk	HEPCGN_06745	0.70	-0.1
82,778	+	gsk	HEPCGN_06745	0.70	-0.1
82,778	+	gsk	HEPCGN_06745	0.70	+0.1
82,779	-	gsk	HEPCGN_06745	0.70	-0.6