Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_14675 and OKGIIK_14680 are separated by 7 nucleotides OKGIIK_14680 and OKGIIK_14685 are separated by 94 nucleotides OKGIIK_14685 and OKGIIK_14690 are separated by 1 nucleotides
OKGIIK_14675: OKGIIK_14675 - Mg-protoporphyrin IX monomethyl ester oxidative cyclase, at 3,199,933 to 3,201,405
_14675
OKGIIK_14680: OKGIIK_14680 - hypothetical protein, at 3,201,413 to 3,202,660
_14680
OKGIIK_14685: OKGIIK_14685 - Methyltransferase family protein, at 3,202,755 to 3,203,384
_14685
OKGIIK_14690: OKGIIK_14690 - Flavin-Reduct domain-containing protein, at 3,203,386 to 3,204,309
_14690
Position (kb)
3201
3202
3203 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3200.551 kb on + strand, within OKGIIK_14675 at 3200.551 kb on + strand, within OKGIIK_14675 at 3200.552 kb on - strand, within OKGIIK_14675 at 3200.552 kb on - strand, within OKGIIK_14675 at 3200.552 kb on - strand, within OKGIIK_14675 at 3200.552 kb on - strand, within OKGIIK_14675 at 3200.632 kb on + strand, within OKGIIK_14675 at 3200.632 kb on + strand, within OKGIIK_14675 at 3200.632 kb on + strand, within OKGIIK_14675 at 3200.632 kb on + strand, within OKGIIK_14675 at 3200.632 kb on + strand, within OKGIIK_14675 at 3200.632 kb on + strand, within OKGIIK_14675 at 3200.633 kb on - strand, within OKGIIK_14675 at 3200.633 kb on - strand, within OKGIIK_14675 at 3200.633 kb on - strand, within OKGIIK_14675 at 3200.633 kb on - strand, within OKGIIK_14675 at 3200.633 kb on - strand, within OKGIIK_14675 at 3200.633 kb on - strand, within OKGIIK_14675 at 3200.633 kb on - strand, within OKGIIK_14675 at 3200.674 kb on + strand, within OKGIIK_14675 at 3200.674 kb on + strand, within OKGIIK_14675 at 3200.674 kb on + strand, within OKGIIK_14675 at 3200.674 kb on + strand, within OKGIIK_14675 at 3200.674 kb on + strand, within OKGIIK_14675 at 3200.674 kb on + strand, within OKGIIK_14675 at 3200.675 kb on - strand, within OKGIIK_14675 at 3200.675 kb on - strand, within OKGIIK_14675 at 3200.675 kb on - strand, within OKGIIK_14675 at 3200.675 kb on - strand, within OKGIIK_14675 at 3200.675 kb on - strand, within OKGIIK_14675 at 3200.675 kb on - strand, within OKGIIK_14675 at 3200.675 kb on - strand, within OKGIIK_14675 at 3201.008 kb on - strand, within OKGIIK_14675 at 3201.118 kb on - strand, within OKGIIK_14675 at 3201.119 kb on - strand, within OKGIIK_14675 at 3201.119 kb on - strand, within OKGIIK_14675 at 3201.119 kb on - strand, within OKGIIK_14675 at 3201.119 kb on - strand, within OKGIIK_14675 at 3201.119 kb on - strand, within OKGIIK_14675 at 3201.119 kb on - strand, within OKGIIK_14675 at 3201.200 kb on - strand, within OKGIIK_14675 at 3201.215 kb on - strand, within OKGIIK_14675 at 3201.215 kb on - strand, within OKGIIK_14675 at 3201.215 kb on - strand, within OKGIIK_14675 at 3201.220 kb on - strand, within OKGIIK_14675 at 3201.220 kb on - strand, within OKGIIK_14675 at 3201.755 kb on + strand, within OKGIIK_14680 at 3201.755 kb on + strand, within OKGIIK_14680 at 3201.755 kb on + strand, within OKGIIK_14680 at 3201.755 kb on + strand, within OKGIIK_14680 at 3201.755 kb on + strand, within OKGIIK_14680 at 3201.755 kb on + strand, within OKGIIK_14680 at 3201.756 kb on - strand, within OKGIIK_14680 at 3201.756 kb on - strand, within OKGIIK_14680 at 3201.756 kb on - strand, within OKGIIK_14680 at 3201.908 kb on + strand, within OKGIIK_14680 at 3201.909 kb on - strand, within OKGIIK_14680 at 3201.959 kb on - strand, within OKGIIK_14680 at 3202.424 kb on + strand, within OKGIIK_14680 at 3202.425 kb on - strand, within OKGIIK_14680 at 3202.586 kb on + strand at 3202.586 kb on + strand at 3202.586 kb on + strand at 3202.586 kb on + strand at 3202.586 kb on + strand at 3202.586 kb on + strand at 3202.586 kb on + strand at 3202.586 kb on + strand at 3202.586 kb on + strand at 3202.586 kb on + strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.587 kb on - strand at 3202.593 kb on + strand at 3202.594 kb on - strand at 3202.594 kb on - strand at 3202.594 kb on - strand at 3202.773 kb on + strand at 3202.773 kb on + strand at 3202.773 kb on + strand at 3202.773 kb on + strand at 3202.773 kb on + strand at 3202.774 kb on - strand at 3202.774 kb on - strand at 3202.774 kb on - strand at 3202.774 kb on - strand at 3202.774 kb on - strand at 3202.908 kb on + strand, within OKGIIK_14685 at 3202.908 kb on + strand, within OKGIIK_14685 at 3202.908 kb on + strand, within OKGIIK_14685 at 3202.908 kb on + strand, within OKGIIK_14685 at 3202.908 kb on + strand, within OKGIIK_14685 at 3202.908 kb on + strand, within OKGIIK_14685 at 3202.908 kb on + strand, within OKGIIK_14685 at 3202.908 kb on + strand, within OKGIIK_14685 at 3202.908 kb on + strand, within OKGIIK_14685 at 3202.908 kb on + strand, within OKGIIK_14685 at 3202.909 kb on - strand, within OKGIIK_14685 at 3202.909 kb on - strand, within OKGIIK_14685 at 3202.909 kb on - strand, within OKGIIK_14685 at 3202.909 kb on - strand, within OKGIIK_14685 at 3202.909 kb on - strand, within OKGIIK_14685 at 3202.909 kb on - strand, within OKGIIK_14685 at 3202.909 kb on - strand, within OKGIIK_14685 at 3202.909 kb on - strand, within OKGIIK_14685 at 3202.909 kb on - strand, within OKGIIK_14685 at 3202.909 kb on - strand, within OKGIIK_14685 at 3202.909 kb on - strand, within OKGIIK_14685 at 3202.938 kb on + strand, within OKGIIK_14685 at 3202.938 kb on + strand, within OKGIIK_14685 at 3202.939 kb on - strand, within OKGIIK_14685 at 3202.966 kb on - strand, within OKGIIK_14685 at 3202.977 kb on + strand, within OKGIIK_14685 at 3202.977 kb on + strand, within OKGIIK_14685 at 3202.977 kb on + strand, within OKGIIK_14685 at 3202.977 kb on + strand, within OKGIIK_14685 at 3202.977 kb on + strand, within OKGIIK_14685 at 3202.978 kb on - strand, within OKGIIK_14685 at 3202.978 kb on - strand, within OKGIIK_14685 at 3203.163 kb on + strand, within OKGIIK_14685 at 3203.163 kb on + strand, within OKGIIK_14685 at 3203.163 kb on + strand, within OKGIIK_14685 at 3203.163 kb on + strand, within OKGIIK_14685 at 3203.163 kb on + strand, within OKGIIK_14685 at 3203.164 kb on - strand, within OKGIIK_14685 at 3203.164 kb on - strand, within OKGIIK_14685 at 3203.164 kb on - strand, within OKGIIK_14685 at 3203.166 kb on + strand, within OKGIIK_14685 at 3203.166 kb on + strand, within OKGIIK_14685 at 3203.166 kb on + strand, within OKGIIK_14685 at 3203.166 kb on + strand, within OKGIIK_14685 at 3203.167 kb on - strand, within OKGIIK_14685 at 3203.167 kb on - strand, within OKGIIK_14685 at 3203.167 kb on - strand, within OKGIIK_14685 at 3203.232 kb on + strand, within OKGIIK_14685 at 3203.233 kb on - strand, within OKGIIK_14685 at 3203.302 kb on - strand, within OKGIIK_14685 at 3203.302 kb on - strand, within OKGIIK_14685 at 3203.355 kb on + strand at 3203.355 kb on + strand at 3203.356 kb on - strand at 3203.356 kb on - strand at 3203.356 kb on - strand at 3203.402 kb on + strand at 3203.414 kb on + strand at 3203.414 kb on + strand at 3203.414 kb on + strand at 3203.415 kb on - strand at 3203.520 kb on + strand, within OKGIIK_14690 at 3203.520 kb on + strand, within OKGIIK_14690 at 3203.521 kb on - strand, within OKGIIK_14690 at 3203.521 kb on - strand, within OKGIIK_14690 at 3203.521 kb on - strand, within OKGIIK_14690 at 3203.590 kb on + strand, within OKGIIK_14690 at 3203.591 kb on - strand, within OKGIIK_14690 at 3203.591 kb on - strand, within OKGIIK_14690 at 3203.591 kb on - strand, within OKGIIK_14690 at 3203.646 kb on - strand, within OKGIIK_14690
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 3,200,551 + OKGIIK_14675 0.42 -0.2 3,200,551 + OKGIIK_14675 0.42 +1.0 3,200,552 - OKGIIK_14675 0.42 -1.6 3,200,552 - OKGIIK_14675 0.42 +0.2 3,200,552 - OKGIIK_14675 0.42 -0.3 3,200,552 - OKGIIK_14675 0.42 +0.3 3,200,632 + OKGIIK_14675 0.47 +0.6 3,200,632 + OKGIIK_14675 0.47 -0.0 3,200,632 + OKGIIK_14675 0.47 -0.8 3,200,632 + OKGIIK_14675 0.47 -1.4 3,200,632 + OKGIIK_14675 0.47 -0.8 3,200,632 + OKGIIK_14675 0.47 -0.4 3,200,633 - OKGIIK_14675 0.48 -2.3 3,200,633 - OKGIIK_14675 0.48 -2.3 3,200,633 - OKGIIK_14675 0.48 +1.0 3,200,633 - OKGIIK_14675 0.48 +0.1 3,200,633 - OKGIIK_14675 0.48 -0.6 3,200,633 - OKGIIK_14675 0.48 +1.3 3,200,633 - OKGIIK_14675 0.48 +2.3 3,200,674 + OKGIIK_14675 0.50 +0.4 3,200,674 + OKGIIK_14675 0.50 -0.4 3,200,674 + OKGIIK_14675 0.50 +0.7 3,200,674 + OKGIIK_14675 0.50 +0.4 3,200,674 + OKGIIK_14675 0.50 -1.4 3,200,674 + OKGIIK_14675 0.50 -1.1 3,200,675 - OKGIIK_14675 0.50 -0.3 3,200,675 - OKGIIK_14675 0.50 -0.2 3,200,675 - OKGIIK_14675 0.50 -1.0 3,200,675 - OKGIIK_14675 0.50 +0.3 3,200,675 - OKGIIK_14675 0.50 -0.6 3,200,675 - OKGIIK_14675 0.50 +0.6 3,200,675 - OKGIIK_14675 0.50 -2.6 3,201,008 - OKGIIK_14675 0.73 +0.6 3,201,118 - OKGIIK_14675 0.80 -2.3 3,201,119 - OKGIIK_14675 0.81 -1.3 3,201,119 - OKGIIK_14675 0.81 -0.2 3,201,119 - OKGIIK_14675 0.81 +1.1 3,201,119 - OKGIIK_14675 0.81 -1.6 3,201,119 - OKGIIK_14675 0.81 +1.5 3,201,119 - OKGIIK_14675 0.81 +0.6 3,201,200 - OKGIIK_14675 0.86 -1.6 3,201,215 - OKGIIK_14675 0.87 -2.0 3,201,215 - OKGIIK_14675 0.87 -0.2 3,201,215 - OKGIIK_14675 0.87 -1.5 3,201,220 - OKGIIK_14675 0.87 -1.0 3,201,220 - OKGIIK_14675 0.87 +0.2 3,201,755 + OKGIIK_14680 0.27 -0.9 3,201,755 + OKGIIK_14680 0.27 -2.0 3,201,755 + OKGIIK_14680 0.27 -1.2 3,201,755 + OKGIIK_14680 0.27 -0.3 3,201,755 + OKGIIK_14680 0.27 +0.1 3,201,755 + OKGIIK_14680 0.27 -0.6 3,201,756 - OKGIIK_14680 0.27 -0.2 3,201,756 - OKGIIK_14680 0.27 -0.8 3,201,756 - OKGIIK_14680 0.27 +0.7 3,201,908 + OKGIIK_14680 0.40 +0.3 3,201,909 - OKGIIK_14680 0.40 -0.9 3,201,959 - OKGIIK_14680 0.44 -0.6 3,202,424 + OKGIIK_14680 0.81 -0.0 3,202,425 - OKGIIK_14680 0.81 +0.3 3,202,586 + +0.7 3,202,586 + -0.6 3,202,586 + +1.6 3,202,586 + -2.2 3,202,586 + -2.3 3,202,586 + +0.2 3,202,586 + +0.4 3,202,586 + -0.2 3,202,586 + -0.0 3,202,586 + -0.2 3,202,587 - +1.4 3,202,587 - +0.1 3,202,587 - +0.9 3,202,587 - +0.1 3,202,587 - -0.1 3,202,587 - +0.7 3,202,587 - -0.0 3,202,587 - +0.6 3,202,587 - +0.3 3,202,587 - -1.3 3,202,587 - +0.1 3,202,587 - -0.3 3,202,587 - +0.5 3,202,587 - +0.4 3,202,587 - -0.6 3,202,587 - +0.3 3,202,587 - -0.7 3,202,587 - +0.3 3,202,587 - +0.5 3,202,593 + +0.3 3,202,594 - -0.3 3,202,594 - +1.0 3,202,594 - -0.1 3,202,773 + +0.7 3,202,773 + -0.0 3,202,773 + -0.5 3,202,773 + -0.0 3,202,773 + -0.5 3,202,774 - -0.0 3,202,774 - +2.3 3,202,774 - +0.3 3,202,774 - +0.6 3,202,774 - -0.8 3,202,908 + OKGIIK_14685 0.24 -0.9 3,202,908 + OKGIIK_14685 0.24 +0.7 3,202,908 + OKGIIK_14685 0.24 +0.5 3,202,908 + OKGIIK_14685 0.24 -1.7 3,202,908 + OKGIIK_14685 0.24 -0.8 3,202,908 + OKGIIK_14685 0.24 +0.3 3,202,908 + OKGIIK_14685 0.24 -1.0 3,202,908 + OKGIIK_14685 0.24 -0.4 3,202,908 + OKGIIK_14685 0.24 +0.9 3,202,908 + OKGIIK_14685 0.24 +0.3 3,202,909 - OKGIIK_14685 0.24 +1.1 3,202,909 - OKGIIK_14685 0.24 +0.1 3,202,909 - OKGIIK_14685 0.24 -0.0 3,202,909 - OKGIIK_14685 0.24 -0.3 3,202,909 - OKGIIK_14685 0.24 -1.7 3,202,909 - OKGIIK_14685 0.24 +0.5 3,202,909 - OKGIIK_14685 0.24 +1.0 3,202,909 - OKGIIK_14685 0.24 -1.1 3,202,909 - OKGIIK_14685 0.24 -0.8 3,202,909 - OKGIIK_14685 0.24 -0.2 3,202,909 - OKGIIK_14685 0.24 -0.0 3,202,938 + OKGIIK_14685 0.29 -1.7 3,202,938 + OKGIIK_14685 0.29 -0.2 3,202,939 - OKGIIK_14685 0.29 -0.8 3,202,966 - OKGIIK_14685 0.33 +0.2 3,202,977 + OKGIIK_14685 0.35 +1.3 3,202,977 + OKGIIK_14685 0.35 -1.0 3,202,977 + OKGIIK_14685 0.35 -1.6 3,202,977 + OKGIIK_14685 0.35 -0.3 3,202,977 + OKGIIK_14685 0.35 -0.1 3,202,978 - OKGIIK_14685 0.35 +0.7 3,202,978 - OKGIIK_14685 0.35 +2.3 3,203,163 + OKGIIK_14685 0.65 +0.5 3,203,163 + OKGIIK_14685 0.65 -1.3 3,203,163 + OKGIIK_14685 0.65 +1.0 3,203,163 + OKGIIK_14685 0.65 -1.2 3,203,163 + OKGIIK_14685 0.65 +1.7 3,203,164 - OKGIIK_14685 0.65 +1.3 3,203,164 - OKGIIK_14685 0.65 +1.3 3,203,164 - OKGIIK_14685 0.65 -0.3 3,203,166 + OKGIIK_14685 0.65 -0.2 3,203,166 + OKGIIK_14685 0.65 +0.1 3,203,166 + OKGIIK_14685 0.65 -0.5 3,203,166 + OKGIIK_14685 0.65 -1.6 3,203,167 - OKGIIK_14685 0.65 -0.2 3,203,167 - OKGIIK_14685 0.65 -0.6 3,203,167 - OKGIIK_14685 0.65 -0.4 3,203,232 + OKGIIK_14685 0.76 -1.3 3,203,233 - OKGIIK_14685 0.76 -0.6 3,203,302 - OKGIIK_14685 0.87 +0.3 3,203,302 - OKGIIK_14685 0.87 -0.2 3,203,355 + -0.0 3,203,355 + +0.2 3,203,356 - -0.3 3,203,356 - -1.0 3,203,356 - -0.1 3,203,402 + -1.0 3,203,414 + -2.1 3,203,414 + -0.1 3,203,414 + -1.0 3,203,415 - +0.4 3,203,520 + OKGIIK_14690 0.15 +0.2 3,203,520 + OKGIIK_14690 0.15 -1.6 3,203,521 - OKGIIK_14690 0.15 -0.5 3,203,521 - OKGIIK_14690 0.15 -0.3 3,203,521 - OKGIIK_14690 0.15 -1.1 3,203,590 + OKGIIK_14690 0.22 +0.2 3,203,591 - OKGIIK_14690 0.22 +2.0 3,203,591 - OKGIIK_14690 0.22 -0.2 3,203,591 - OKGIIK_14690 0.22 -0.7 3,203,646 - OKGIIK_14690 0.28 -1.5
Or see this region's nucleotide sequence