Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14345

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
3,132,686	+		OKGIIK_14340	0.52	+0.4
3,132,686	+		OKGIIK_14340	0.52	+1.4
3,132,686	+		OKGIIK_14340	0.52	+1.7
3,132,686	+		OKGIIK_14340	0.52	+0.2
3,132,686	+		OKGIIK_14340	0.52	+0.1
3,132,687	-		OKGIIK_14340	0.52	-1.0
3,132,687	-		OKGIIK_14340	0.52	-0.3
3,132,687	-		OKGIIK_14340	0.52	-1.8
3,132,687	-		OKGIIK_14340	0.52	-0.5
3,132,687	-		OKGIIK_14340	0.52	-0.3
3,132,687	-		OKGIIK_14340	0.52	+0.1
3,132,687	-		OKGIIK_14340	0.52	-0.6
3,132,782	+		OKGIIK_14340	0.58	-0.6
3,132,782	+		OKGIIK_14340	0.58	-1.0
3,132,782	+		OKGIIK_14340	0.58	-0.8
3,132,783	-		OKGIIK_14340	0.58	+1.2
3,133,016	+		OKGIIK_14340	0.72	-1.0
3,133,016	+		OKGIIK_14340	0.72	-0.0
3,133,016	+		OKGIIK_14340	0.72	-0.7
3,133,016	+		OKGIIK_14340	0.72	-0.6
3,133,016	+		OKGIIK_14340	0.72	+1.0
3,133,016	+		OKGIIK_14340	0.72	-0.8
3,133,016	+		OKGIIK_14340	0.72	+1.5
3,133,016	+		OKGIIK_14340	0.72	+0.8
3,133,016	+		OKGIIK_14340	0.72	-0.6
3,133,016	+		OKGIIK_14340	0.72	-0.1
3,133,016	+		OKGIIK_14340	0.72	-0.0
3,133,017	-		OKGIIK_14340	0.72	+0.0
3,133,017	-		OKGIIK_14340	0.72	-1.9
3,133,017	-		OKGIIK_14340	0.72	-1.6
3,133,017	-		OKGIIK_14340	0.72	-0.0
3,133,017	-		OKGIIK_14340	0.72	-0.4
3,133,017	-		OKGIIK_14340	0.72	-1.3
3,133,017	-		OKGIIK_14340	0.72	+0.2
3,133,017	-		OKGIIK_14340	0.72	+0.1
3,133,017	-		OKGIIK_14340	0.72	+0.9
3,133,403	+				-0.3
3,133,403	+				-0.6
3,133,403	+				-0.0
3,133,403	+				+1.0
3,133,403	+				-0.2
3,133,403	+				+0.5
3,133,403	+				+1.2
3,133,404	-				+0.6
3,133,404	-				+1.0
3,133,404	-				-0.8
3,133,404	-				-0.0
3,133,404	-				+0.6
3,133,404	-				-0.2
3,133,404	-				-1.1
3,133,404	-				-0.3
3,133,404	-				+0.4
3,133,404	-				+0.5
3,133,404	-				-1.2
3,133,404	-				-0.1
3,133,404	-				-0.5
3,133,446	+				-0.6
3,133,447	-				-0.6
3,133,447	-				-1.3
3,133,447	-				-0.1
3,133,447	-				-0.8
3,133,447	-				-0.0
3,133,447	-				-1.4
3,133,447	-				-0.3
3,133,472	+				-1.0
3,133,472	+				-1.6
3,133,472	+				-1.9
3,133,472	+				+0.4
3,133,472	+				-1.2
3,133,472	+				-0.6
3,133,473	-				-1.5
3,133,473	-				+0.2
3,133,473	-				-1.0
3,133,473	-				+1.2
3,133,473	-				-0.5
3,133,473	-				-0.8
3,133,473	-				+0.4
3,133,473	-				-0.4
3,133,473	-				-0.0
3,133,473	-				-0.3
3,133,473	-				+0.8
3,133,473	-				-0.8
3,133,473	-				+2.0
3,133,473	-				-0.0
3,133,473	-				-1.0
3,133,474	-				-0.3
3,133,474	-				-0.6
3,133,727	+				-1.0
3,133,973	+	nagA	OKGIIK_14345	0.24	-0.5
3,133,973	+	nagA	OKGIIK_14345	0.24	+0.5
3,133,973	+	nagA	OKGIIK_14345	0.24	-1.5
3,133,973	+	nagA	OKGIIK_14345	0.24	-1.0
3,133,973	+	nagA	OKGIIK_14345	0.24	-2.6
3,133,974	-	nagA	OKGIIK_14345	0.24	-1.5
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.0
3,133,974	-	nagA	OKGIIK_14345	0.24	+1.4
3,133,974	-	nagA	OKGIIK_14345	0.24	-1.0
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.6
3,133,974	-	nagA	OKGIIK_14345	0.24	-1.8
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.0
3,133,974	-	nagA	OKGIIK_14345	0.24	-1.8
3,133,974	-	nagA	OKGIIK_14345	0.24	-2.0
3,133,974	-	nagA	OKGIIK_14345	0.24	+0.8
3,133,974	-	nagA	OKGIIK_14345	0.24	-1.3
3,133,974	-	nagA	OKGIIK_14345	0.24	-1.9
3,134,232	-	nagA	OKGIIK_14345	0.45	-1.2
3,134,390	+	nagA	OKGIIK_14345	0.58	-0.6
3,134,390	+	nagA	OKGIIK_14345	0.58	-0.3
3,134,390	+	nagA	OKGIIK_14345	0.58	+1.7
3,134,390	+	nagA	OKGIIK_14345	0.58	-1.3
3,134,391	-	nagA	OKGIIK_14345	0.58	-1.3
3,134,391	-	nagA	OKGIIK_14345	0.58	-1.0
3,134,429	+	nagA	OKGIIK_14345	0.61	-1.7
3,134,429	+	nagA	OKGIIK_14345	0.61	-0.3
3,134,430	-	nagA	OKGIIK_14345	0.61	-3.7
3,134,430	-	nagA	OKGIIK_14345	0.61	-0.9
3,134,538	+	nagA	OKGIIK_14345	0.70	-1.0
3,134,539	-	nagA	OKGIIK_14345	0.70	+1.3
3,134,539	-	nagA	OKGIIK_14345	0.70	-0.3
3,134,539	-	nagA	OKGIIK_14345	0.70	+0.6
3,134,539	-	nagA	OKGIIK_14345	0.70	-1.3
3,134,798	-				-0.0
3,134,856	-				-2.0
3,134,856	-				-0.0
3,134,856	-				+0.1
3,134,924	+				-0.2
3,134,924	+				-0.3
3,134,924	+				+0.2
3,134,924	+				-2.2
3,134,924	+				-1.6
3,134,924	+				-1.5
3,134,924	+				-0.1
3,134,924	+				-1.5
3,134,924	+				+0.2
3,135,017	-				-1.6
3,135,114	+	agaS	OKGIIK_14350	0.18	+0.6
3,135,114	+	agaS	OKGIIK_14350	0.18	-1.5
3,135,114	+	agaS	OKGIIK_14350	0.18	-1.4
3,135,114	+	agaS	OKGIIK_14350	0.18	+0.3
3,135,114	+	agaS	OKGIIK_14350	0.18	+0.2
3,135,115	-	agaS	OKGIIK_14350	0.18	-1.3
3,135,499	+	agaS	OKGIIK_14350	0.55	+0.3
3,135,499	+	agaS	OKGIIK_14350	0.55	+0.5
3,135,499	+	agaS	OKGIIK_14350	0.55	+1.7
3,135,499	+	agaS	OKGIIK_14350	0.55	-0.6
3,135,499	+	agaS	OKGIIK_14350	0.55	+0.2
3,135,499	+	agaS	OKGIIK_14350	0.55	+0.6
3,135,499	+	agaS	OKGIIK_14350	0.55	-0.5
3,135,499	+	agaS	OKGIIK_14350	0.55	-1.9
3,135,499	+	agaS	OKGIIK_14350	0.55	-1.0
3,135,500	-	agaS	OKGIIK_14350	0.55	+1.6
3,135,500	-	agaS	OKGIIK_14350	0.55	-1.2
3,135,500	-	agaS	OKGIIK_14350	0.55	-1.5
3,135,500	-	agaS	OKGIIK_14350	0.55	+1.2
3,135,500	-	agaS	OKGIIK_14350	0.55	-0.3
3,135,500	-	agaS	OKGIIK_14350	0.55	-1.9
3,135,500	-	agaS	OKGIIK_14350	0.55	-0.3
3,135,500	-	agaS	OKGIIK_14350	0.55	+1.2
3,135,500	-	agaS	OKGIIK_14350	0.55	-0.0
3,135,500	-	agaS	OKGIIK_14350	0.55	+0.5
3,135,715	+	agaS	OKGIIK_14350	0.76	-0.3
3,135,715	+	agaS	OKGIIK_14350	0.76	-0.0
3,135,716	-	agaS	OKGIIK_14350	0.76	-0.8
3,135,716	-	agaS	OKGIIK_14350	0.76	+0.9
3,135,716	-	agaS	OKGIIK_14350	0.76	-0.3
3,135,776	+	agaS	OKGIIK_14350	0.82	+0.1
3,135,778	+	agaS	OKGIIK_14350	0.82	-0.5
3,135,778	+	agaS	OKGIIK_14350	0.82	-0.9
3,135,778	+	agaS	OKGIIK_14350	0.82	-0.1
3,135,779	-	agaS	OKGIIK_14350	0.82	-1.2
3,135,779	-	agaS	OKGIIK_14350	0.82	-1.2
3,135,779	-	agaS	OKGIIK_14350	0.82	-1.5
3,135,779	-	agaS	OKGIIK_14350	0.82	-0.2
3,135,779	-	agaS	OKGIIK_14350	0.82	-0.3
3,135,779	-	agaS	OKGIIK_14350	0.82	+0.4
3,135,779	-	agaS	OKGIIK_14350	0.82	+0.4
3,135,779	-	agaS	OKGIIK_14350	0.82	-0.3
3,135,779	-	agaS	OKGIIK_14350	0.82	-0.6
3,135,779	-	agaS	OKGIIK_14350	0.82	-0.5
3,135,779	-	agaS	OKGIIK_14350	0.82	-0.4
3,135,779	-	agaS	OKGIIK_14350	0.82	+0.0
3,135,779	-	agaS	OKGIIK_14350	0.82	-0.6
3,135,788	-	agaS	OKGIIK_14350	0.83	-1.3